Contig 012352:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032J22Sequence527003213 (3)ref|XP_009603754.1|120PREDICTED: uncharacterized protein LOC104098663 [Nicotiana tomentosiformis]746012352 (2)ref|XP_009762418.1|3e-99PREDICTED: putative nuclease HARBI1 [Nicotiana sylvestris]
JMFN005B12Sequence617012352 (2)ref|XP_009762418.1|3e-114PREDICTED: putative nuclease HARBI1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF032J22-                                            ATTCTGTAACATGACTTGCCAAGTTG
                      ____________________________________________________________
consensus                                               ATTCTGTAACATGACTTGCCAAGTTG
 
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rJMFF032J22-          CCAATGCACATAGGTAAATTACAGTATTGCCCTTTATATAGAAAACACAAAATTGTATTG
                      ____________________________________________________________
consensus             CCAATGCACATAGGTAAATTACAGTATTGCCCTTTATATAGAAAACACAAAATTGTATTG
 
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JMFN005B12+                         ACTATTTTTTTTAAGTTGATTCTATAGAAACTTGGTGCCGGCGTGA
rJMFF032J22-          TAAATTCTAACATAACTATTTTTTTTAAGTTGATTCTATAGAAACTTGGTGCCGGCGTGA
                      ____________________________________________________________
consensus             TAAATTCTAACATAACTATTTTTTTTAAGTTGATTCTATAGAAACTTGGTGCCGGCGTGA
 
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JMFN005B12+           TGTTGGTGCAAGAGCTTGTGGGCAATTTGATCTCTAGCCTGCATTGCGGTGGCCGACCGG
rJMFF032J22-          TGTTGGTGCAAGAGCTTGTGGGCAATTTGATCTCTAGCCTGCATTGCGGTGGCCGACCGG
                      ____________________________________________________________
consensus             TGTTGGTGCAAGAGCTTGTGGGCAATTTGATCTCTAGCCTGCATTGCGGTGGCCGACCGG
 
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JMFN005B12+           ACTGGATTTTCCGGCGACATTTCGTCGTCGAAGAGATCGAACCTTAACGCCGGGTCCAAT
rJMFF032J22-          ACTGGATTTTCCGGCGACATTTCGTCGTCGAAGAGATCGAACCTTAACGCCGGGTCCAAT
                      ____________________________________________________________
consensus             ACTGGATTTTCCGGCGACATTTCGTCGTCGAAGAGATCGAACCTTAACGCCGGGTCCAAT
 
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JMFN005B12+           TCTTCCCCTTGCATTTCGCAAATGTTATGCAAAACGCAGCAGGCGCCCAGCACCACCGGC
rJMFF032J22-          TCTTCCCCTTGCATTTCGCAAATGTTATGCAAAACGCAGCAGGCGCCCAGCACCACCGGC
                      ____________________________________________________________
consensus             TCTTCCCCTTGCATTTCGCAAATGTTATGCAAAACGCAGCAGGCGCCCAGCACCACCGGC
 
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JMFN005B12+           AGGTCCTGCAGCTTCACCTCCGTCCTCTTCTGGAGGCAGCTCCACCGCGCCTTCAGCCGC
rJMFF032J22-          AGGTCCTGCAGCTTCACCTCCGTCCTCTTCTGGAGGCAGCTCCACCGCGCCTTCAGCCGC
                      ____________________________________________________________
consensus             AGGTCCTGCAGCTTCACCTCCGTCCTCTTCTGGAGGCAGCTCCACCGCGCCTTCAGCCGC
 
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JMFN005B12+           ATAAACGCCTCCTTCGCCACCTTCTCCACCTCGCCGACTTTCTCGTTGAAGGCGTGCTGT
rJMFF032J22-          ATAAACGCCTCCTTCGCCACCTTCTCCACCTCGCCGACTTTTTCGTTGAAGGCGTGCTGT
                      ____________________________________________________________
consensus             ATAAACGCCTCCTTCGCCACCTTCTCCACCTCGCCGACTTTTTCGTTGAAGGCGTGCTGT
 
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JMFN005B12+           GTCCAGGTCAGATTTTGGTGCGTGTACGGCACCAGAGTCCAGTCCGTTAACGGATACCCT
rJMFF032J22-          GTCCAGGTCAGATTTTGGTGCGTGTACGGCACCAGAGTCCAGTCCGTTAACGGATACCCT
                      ____________________________________________________________
consensus             GTCCAGGTCAGATTTTGGTGCGTGTACGGCACCAGAGTCCAGTCCGTTAACGGATACCCT
 
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JMFN005B12+           GAATTTCCGGCCACCCAGATGTCTTTCAGCAGGCCGCGGCTTGCGCGCTGGTAGAGCGCC
rJMFF032J22-          GAATTTCCGGCCACCCAGATGTCTTTCAGCAGGCCGCGGCTTGCGCGCTGGTAGAGCGCC
                      ____________________________________________________________
consensus             GAATTTCCGGCCACCCAGATGTCTTTCAGCAGGCCGCGGCTTGCGCGCTGGTAGAGCGCC
 
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JMFN005B12+           GATTTTTCTAGAACCTTGTCGTCGGACATGGATCCCGGCCAGCCGATGCAGACGTCGGAG
rJMFF032J22-          GATTTTTCTAGAACCTTGTCGTCGGACATGGATCCCGGCCAGCCGATGCAGACGTCGGAG
                      ____________________________________________________________
consensus             GATTTTTCTAGAACCTTGTCGTCGGACATGGATCCCGGCCAGCCGATGCAGACGTCGGAG
 
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JMFN005B12+           AATACTCCTTTGGAGTCTACGACTCCTTGGAGCGTGAC-GGAGTAGGATGTCTTCTGGTT
rJMFF032J22-          AATACTCCTTTGGAGTCTACGACTCCTTGGAGCGTGACGGGAGTAGGATGTCTTCTGGTT
                      ____________________________________________________________
consensus             AATACTCCTTTGGAGTCTACGACTCCTTGGAGCGTGACGGGAGTAGGATGTCTTCTGGTT
 
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JMFN005B12+           TCGCTCCGTGTGGCGTTTGTTGAAGTAGGCGG                            
rJMFF032J22-          TCGCTCCGTGTGGCGTTTGTTGAAGTAGGCGGCGACCGANGCTTTCGGCGCGATTATCGG
                      ____________________________________________________________
consensus             TCGCTCCGTGTGGCGTTTGTTGAAGTAGGCGGCGACCGANGCTTTCGGCGCGATTATCGG