| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF032G03 | Sequence | 553 | 012349 (8) | ref|XP_011084873.1| | 1e-101 | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Sesam | 742 | 012349 (8) | ref|XP_011084873.1| | 3e-80 | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Sesam |
| JMFS129D04 | Sequence | 601 | 012349 (8) | ref|XP_011084873.1| | 2e-103 | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Sesam | |||||
| JMSF009M19 | Sequence | 315 | 012349 (8) | ref|XP_004235234.1| | 2e-40 | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Solan | 745 | 012349 (8) | ref|XP_011084873.1| | 7e-85 | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Sesam |
| JMSF030O16 | Sequence | 640 | 015780 | ref|XP_009593077.1| | 4e-70 | PREDICTED: clp protease-related protein At4g12060, chloroplastic-like [Nicotian | 733 | 012349 (8) | ref|XP_011084873.1| | 6e-99 | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Sesam |
| JMSF031B04 | Sequence | 627 | 012349 (8) | ref|XP_011084873.1| | 5e-113 | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Sesam | 630 | 012349 (8) | ref|XP_011084873.1| | 1e-77 | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Sesam |
This contig is upended
. : . : . : . : . : . :
JMFS129D04- TCTCCTCACTTCTCCTCGGTCATCTCGAAACCCCCCAACACAGAAACCCT
____________________________________________________________
consensus TCTCCTCACTTCTCCTCGGTCATCTCGAAACCCCCCAACACAGAAACCCT
. : . : . : . : . : . :
JMFS129D04- AGCGCACTCTGACTCACAATCCAAGCCATGGCGACGGGCGGTCCGAACTTAGAGTGCCGG
JMFF032G03- TCCGAACTTAGAGTGCCGG
JMSF009M19- TCCGAACTTAGAGTGCCGG
JMSF031B04- TCCGAACTTAGAGTGCCGG
____________________________________________________________
consensus AGCGCACTCTGACTCACAATCCAAGCCATGGCGACGGGCGGTCCGAACTTAGAGTGCCGG
. : . : . : . : . : . :
JMFS129D04- ATGTACGAAGCCAAGTACCCGGAAGTGGACCAAGCCGTGATGATACAGGTTAAGAGCATG
JMFF032G03- ATGTACGAGGCTAAGTACCCCGAAGTGGACCACGCGGTGATGATACAGGTGAAAAGTATG
JMSF009M19- ATGTACGAGGCTAAGTACCCCGAAGTGGACCACGCGGTGATGATACAGGTGAAAAGTATG
JMSF031B04- ATGTACGAGGCTAAGTACCCCGAAGTGGACCACGCGGTGATGATACAGGTGAAAAGTATG
____________________________________________________________
consensus ATGTACGAGGCTAAGTACCCCGAAGTGGACCACGCGGTGATGATACAGGTGAAAAGTATG
. : . : . : . : . : . :
JMFS129D04- GCCGACAGCGGCGCGTACGTCTCACTCCTGGAATACAACAACATCGAGGGAATGATCCTC
JMFF032G03- GCTGACAGCGGCGCCTATGTTTCGCTCCTCGAGTACAACAATATCGAGGGGATGATTCTC
JMSF009M19- GCTGACAGCGGCGCCTATGTTTCGCTCCTCGAGTACAACAATATCGAGGGGATGATTCTC
JMSF031B04- GCTGACAGCGGCGCCTATGTTTCGCTCCTCGAGTACAACAATATCGAGGGGATGATTCTC
____________________________________________________________
consensus GCTGACAGCGGCGCCTATGTTTCGCTCCTCGAGTACAACAATATCGAGGGGATGATTCTC
. : . : . : . : . : . :
JMFS129D04- TTCTCCGAGCTCTCTCGCCGCCGGATACGGAGCATCAGCAGCTTAATCAAGGTCGGCCGG
JMFF032G03- TTCTCCGAGCTCTCTCGCCGCCGGATTCGTAGCATCAGTAGCTTAATCAAGGTGGGCCGA
JMSF009M19- TTCTCCGAGCTCTCTCGCCGCCGGATTCGTAGCATCAGTAGCTTAATCAAGGTGGGCCGA
JMSF031B04- TTCTCCGAGCTCTCTCGCCGCCGGATTCGTAGCATCAGTAGCTTAATCAAGGTGGGCCGA
____________________________________________________________
consensus TTCTCCGAGCTCTCTCGCCGCCGGATTCGTAGCATCAGTAGCTTAATCAAGGTGGGCCGA
. : . : . : . : . : . :
JMFS129D04- ATCGAGCCCGTCATGGTCCTTCGTGTCGACAAGGAGAAGGGGTACATCGATCTCAGCAAG
JMFF032G03- ATCGAACCCGTTATGGTCCTTCGGGTTGACAAGGAGAAGGGTTACATCGATCTCAGCAAA
JMSF009M19- ATCGAACCCGTTATGGTCCTTCGGGTTGACAAGGAGAAGGGTTACATCGATCTCAGCAA
JMSF031B04- ATCGAACCCGTTATGGTCCTTCGGGTTGACAAGGAGAAGGGTTACATCGATCTCAGCAAA
____________________________________________________________
consensus ATCGAACCCGTTATGGTCCTTCGGGTTGACAAGGAGAAGGGTTACATCGATCTCAGCAAA
. : . : . : . : . : . :
JMFS129D04- CGGAGAGTCTCCGAGGAGGACATTCAGGCCTGTGAAGAGAGGTACAACAAGAGCAAGCTC
JMFF032G03- CGCCGGGTCTCCGAGGAGGATATTCAGGCTTGTGAAGAGAGGTATAATAAGAGCAAGCTT
JMSF031B04- CGCCGGGTCTCCGAGGAGGATATTCAGGCTTGTGAAGAGAGGTATAATAAGAGCAAGCTT
____________________________________________________________
consensus CGCCGGGTCTCCGAGGAGGATATTCAGGCTTGTGAAGAGAGGTATAATAAGAGCAAGCTT
. : . : . : . : . : . :
JMFS129D04- GTCCATTCTATCATGCGCCACGTTGCCGAGACCATGAATATCGATCTCGAGGATCTTTAC
JMFF032G03- GTTCACTCCATTATGCGCCATGTCGCGGAAACCATGCAAGTCGATCTCGAGGATCTTTAC
JMSF031B04- GTTCACTCCATTATGCGCCATGTCGCGGAAACCATGCAAGTCGATCTCGAGGATCTTTAC
____________________________________________________________
consensus GTTCACTCCATTATGCGCCATGTCGCGGAAACCATGCAAGTCGATCTCGAGGATCTTTAC
. : . : . : . : . : . :
JMFS129D04- ATTCATGTTGGTTGGCCTCTATACAGAAAATATGGACATGCTTTTGAGGCATTCAAACTA
JMFF032G03- ATCCATGTTGGTTGGCCTTTATATAGAAAATATGGTCATGCTTTTGAGGCTTTCAAGTTG
JMSF031B04- ATCCATGTTGGTTGGCCTTTATATAGAAAATATGGTCATGCTTTTGAGGCTTTCAAGTTG
____________________________________________________________
consensus ATCCATGTTGGTTGGCCTTTATATAGAAAATATGGTCATGCTTTTGAGGCTTTCAAGTTG
. : . : . : . : . : . :
JMFS129D04- GTTGTTAATGATCCAGATTCTGTTCTTAATTCCCTCACTCGTGAAGTTAAAGAAGTTGGT
JMFF032G03- GTTGTTAATGATCCAGATTCTGTTCTAAATTCCCTCACCCGTGAAGTTAAAGATGTTGGC
JMSF031B04- GTTGTTAATGATCCAGATTCTGTTCTAAATTCCCTCACCCGTGAAGTTAAAGATGTTGGC
rJMSF030O16+ AATTCCCTCACTCGTGAAGTTAAAGAAGTTGGT
____________________________________________________________
consensus GTTGTTAATGATCCAGATTCTGTTCTAAATTCCCTCACTCGTGAAGTTAAAGAAGTTGGT
. : . : . : . : . : . :
JMFS129D04- CCTGATGG
JMFF032G03- CCTGATGG
JMSF031B04- CCTGATGGGAAGGAGGTAACTAAGGTGGTTCCCGCACTATCAGAGGAAGTTAAAGATTCT
rJMSF030O16+ CCTGATGGTCAGGAGGTAACTAAAGTGGTTCCTGCACTAACAGAAGATGTTAAAGATTCT
rJMSF031B04+ GTTAAAGATTCT
rJMSF009M19+ GTGGTTCCCGCACTATCAGAGGAAGTTAAAGATTCT
rJMFF032G03+ GTTAAAGATTCT
____________________________________________________________
consensus CCTGATGGTCAGGAGGTAACTAAGGTGGTTCCCGCACTATCAGAGGAAGTTAAAGATTCT
. : . : . : . : . : . :
JMSF031B04- TTGG
rJMSF030O16+ TTGGTAAAAAATATTAGGAGAAGAATGACCCCACAGCCTTTGAAGATTCGCGCAGATATT
rJMSF031B04+ TNGGTAAAAAATATTAGGAGAAGAATGACACCACANCCACTGAAGATTCGGGCTGATATT
rJMSF009M19+ TTGGTAAAAAATATTAGGAGAAGAATGACACCACAACCACTGAAGATTCGGGCTGATATT
rJMFF032G03+ TTGGTAAAAAATATTAGGAGAAGAATGACACCACAACCACTGAAGATTCGGGCTGATATT
____________________________________________________________
consensus TTGGTAAAAAATATTAGGAGAAGAATGACACCACAACCACTGAAGATTCGGGCTGATATT
. : . : . : . : . : . :
rJMSF030O16+ GAGATGAAATGTTTTCAGTTTGATGGTGTTCTTCACATTAAGGATGCAATGCGGAAAGCT
rJMSF031B04+ GAGATGAAATGTTTTCAATTTGATGGTGTTCTTCACATTAAGGATGCAATGCGTAAAGCT
rJMSF009M19+ GAGATGAAATGTTTTCAATTTGATGGTGTTCTTCACATTAAGGATGCAATGCGTAAAGCT
rJMFF032G03+ GAGATGAAATGTTTTCAATTTGATGGTGTTCTTCACATTAAGGATGCAATGCGTAAAGCT
____________________________________________________________
consensus GAGATGAAATGTTTTCAATTTGATGGTGTTCTTCACATTAAGGATGCAATGCGTAAAGCT
. : . : . : . : . : . :
rJMSF030O16+ GAAGCTTCTGGTAATAAGGATTGCCCAGTTAAAATTAAACTTGTTGCTCCTCCAGCATAT
rJMSF031B04+ GAAGCTGCTGGTAATATCGATTGCCCTGTTAAAATTAAACTTGTCGCCCCTCCAGCATAT
rJMSF009M19+ GAAGCTGCTGGTAATATCGATTGCCCTGTTAAAATTAAACTTGTCGCCCCTCCAGCATAT
rJMFF032G03+ GAAGCTGCTGGTAATATCGATTGCCCTGTTAAAATTAAACTTGTCGCCCCTCCAGCATAT
____________________________________________________________
consensus GAAGCTGCTGGTAATATCGATTGCCCTGTTAAAATTAAACTTGTCGCCCCTCCAGCATAT
. : . : . : . : . : . :
rJMSF030O16+ GTTCTTAACACTCAGACGCTTGATAAGGAGCAAGGCATTGCAATCCTTGACAAAGCAATT
rJMSF031B04+ GTTCTCAACACTCAGACTCTTGACAAGGAGCAAGGCATAACTGTCCTTAATCAAGCAATT
rJMSF009M19+ GTTCTCAACACTCAGACTCTTGACAAGGAGCAAGGCATAACTGTCCTTAATCAAGCAATT
rJMFF032G03+ GTTCTCAACACTCAGACTCTTGACAAGGAGCAAGGCATAACTGTCCTTAATCAAGCAATT
____________________________________________________________
consensus GTTCTCAACACTCAGACTCTTGACAAGGAGCAAGGCATAACTGTCCTTAATCAAGCAATT
. : . : . : . : . : . :
rJMSF030O16+ GCTGCTTGCACCGAGGAAATAGAACGTCACAAGGGAAAACTCACTGTCAAGGAAGCGCCA
rJMSF031B04+ GCAGCTTGCACTGAGGAAATTGAGCGTCATAAGGGAAAACTCACTGTGAAGGAGGCTCCT
rJMSF009M19+ GCAGCTTGCACTGAGGAAATTGAGCGTCATAAGGGAAAACTCACTGTGAAGGAGGCTCCT
rJMFF032G03+ GCAGCTTGCACTGAGGAAATTGAGCGTCATAAGGGAAAACTCACTGTGAAGGAGGCTCCT
____________________________________________________________
consensus GCAGCTTGCACTGAGGAAATTGAGCGTCATAAGGGAAAACTCACTGTGAAGGAGGCTCCT
. : . : . : . : . : . :
rJMSF030O16+ AGAGCGGTGAGTGAAAGAGAGGATAAATTACTTGCTGAGCAAATGGCTAAGCTAGGACAA
rJMSF031B04+ AGAGCGGTGAGTGAAAGGGAGGATAAACTCCTTGCTGAACAGATGGCTAAGCTAACCCGT
rJMSF009M19+ AGAGCGGTGAGTGAAAGGGAGGATAAACTCCTTGCTGAACAGATGGCTAAGCTAACCCGT
rJMFF032G03+ AGAGCGGTGAGTGAAAGGGAGGATAAACTCCTTGCTGAACAGATGGCTAAGCTAACCCGT
____________________________________________________________
consensus AGAGCGGTGAGTGAAAGGGAGGATAAACTCCTTGCTGAACAGATGGCTAAGCTAACCCGT
. : . : . : . : . : . :
rJMSF030O16+ GCGAACGAGGAGGTCAGCGGTGATGAAGATAGCGAAGAGGAGGAAGATACGGGTATGGGA
rJMSF031B04+ GAGAATGAGGAGGTCAGCGGTGATGAAGATAGTGAGGAGGAAGAAGATACGGGGATGGGA
rJMSF009M19+ GAGAATGAGGAGGTCAGCGGTGATGAAGATAGTGAGGAGGAAGAAGATACGGGGATGGGA
rJMFF032G03+ GAGAATGAGGAGGTCAGCGGTGATGAAGATAGTGAGGAGGAAGAAGATACGGGGATGGGA
____________________________________________________________
consensus GAGAATGAGGAGGTCAGCGGTGATGAAGATAGTGAGGAGGAAGAAGATACGGGGATGGGA
. : . : . : . : . : . :
rJMSF030O16+ GAAATTGATGTAGAAAACACGGGACATGGTATAACAGAGTGAA
rJMSF031B04+ GAAATTGATGTGGAGAACTCAGGACATGGCATAACAGAATGAA
rJMSF009M19+ GAAATTGATGTGGAGAACTCAGGACATGGCATAACAGAATGAATACTCCGTTTAATCCCC
rJMFF032G03+ GAAATTGATGTGGAGAACTCAGGACATGGCATAACAGAATGAATACTCCGTTTAATCCCC
____________________________________________________________
consensus GAAATTGATGTGGAGAACTCAGGACATGGCATAACAGAATGAATACTCCGTTTAATCCCC
. : . : . : . : . : . :
rJMSF009M19+ AACTCAGAAGATACACTTCCAATATTGATGCAGCACTCTCCATACTACTGGGTGGATGTA
rJMFF032G03+ AACTCAGAAGATACACTTCCAATATTGATGCAGCACTCTCCATACTACTGGGTGGATGTA
____________________________________________________________
consensus AACTCAGAAGATACACTTCCAATATTGATGCAGCACTCTCCATACTACTGGGTGGATGTA
. : . : . : . : . : . :
rJMSF009M19+ TACAATTTTGAATTTTGTCAAGCATTTTTTTTCTTTTTATAATTACCTGTTTCATGTATT
rJMFF032G03+ TACAATTTTGAATTTTGTCAAGCATTTTTTTTCTTTTTATAATTACCTGTTTCATGTATT
____________________________________________________________
consensus TACAATTTTGAATTTTGTCAAGCATTTTTTTTCTTTTTATAATTACCTGTTTCATGTATT
. : . : . : . : . : . :
rJMSF009M19+ CATTTAGCAGTTTTACAATGTCTTGCTGACAAGTAGCACATTCTGGAGCTGTTTATCTGC
rJMFF032G03+ CATTTAGCAGTTTTACAATGTCTTGCTGACAAGTAGCACATTCTGGAGCTGTTTATCTGC
____________________________________________________________
consensus CATTTAGCAGTTTTACAATGTCTTGCTGACAAGTAGCACATTCTGGAGCTGTTTATCTGC
. : . : . : . : . : . :
rJMSF009M19+ ACATATGTTG
rJMFF032G03+ ACATATGTTGTGCATTTCTGCATTCTATTGTGTCCAGATGCCGCAGCTTTGCATCATCAT
____________________________________________________________
consensus ACATATGTTGTGCATTTCTGCATTCTATTGTGTCCAGATGCCGCAGCTTTGCATCATCAT