| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004I03 | Sequence | 515 | 010253 (3) | ref|XP_009603159.1| | 105 | PREDICTED: uncharacterized protein LOC104098194 [Nicotiana tomentosiformis] | 741 | 012346 (3) | ref|XP_011090123.1| | 352 | PREDICTED: uncharacterized protein LOC105170900 [Sesamum indicum] ref|XP_0110901 |
| JMFF032A02 | Sequence | 496 | 010253 (3) | ref|XP_009603159.1| | 67.8 | PREDICTED: uncharacterized protein LOC104098194 [Nicotiana tomentosiformis] | 659 | 012346 (3) | ref|XP_011090123.1| | 281 | PREDICTED: uncharacterized protein LOC105170900 [Sesamum indicum] ref|XP_0110901 |
| JMSF001P22 | Sequence | 267 | 010253 (3) | 752 | 012346 (3) | ref|XP_011090123.1| | 344 | PREDICTED: uncharacterized protein LOC105170900 [Sesamum indicum] ref|XP_0110901 | |||
This contig is upended
. : . : . : . : . : . :
rJMFF004I03+ ACCAAGACTGCTGCTGAGTATG
____________________________________________________________
consensus ACCAAGACTGCTGCTGAGTATG
. : . : . : . : . : . :
rJMFF004I03+ AACGCCGCAGGGAAAACTTCTTCAATGAGCTGGAAATTGTTTTTGCAGATGTGGTAATGG
rJMSF001P22+ ATGAGCTGGAAATTGTTTTTGCAGATGTGGTAATGG
____________________________________________________________
consensus AACGCCGCAGGGAAAACTTCTTCAATGAGCTGGAAATTGTTTTTGCAGATGTGGTAATGG
. : . : . : . : . : . :
rJMFF004I03+ CCATAATTGCAGATTTTATGCTTGTCTATCTTCCTGCTCCTACTGTATCTCTCCGACCAC
rJMSF001P22+ CCATAATTGCAGATTTTATGCTTGTCTATCTTCCTGCTCCTACTGTATCTCTCCGACCAC
____________________________________________________________
consensus CCATAATTGCAGATTTTATGCTTGTCTATCTTCCTGCTCCTACTGTATCTCTCCGACCAC
. : . : . : . : . : . :
rJMFF004I03+ CTATTGCACTTAATGCTGGTCGTCTTGCTAAGTTCTTCTACAACTGTCCAGAAAATGCAT
rJMSF001P22+ CTATTGCACTTAATGCTGGTCGTCTTGCTAAGTTCTTCTACAACTGTCCAGAAAATGCAT
rJMFF032A02+ TATTGCACTTAATGCTGGTCGTCTTGCTAAGTTCTTCTACAACTGTCCAGAAAATGCAT
____________________________________________________________
consensus CTATTGCACTTAATGCTGGTCGTCTTGCTAAGTTCTTCTACAACTGTCCAGAAAATGCAT
. : . : . : . : . : . :
rJMFF004I03+ TCCAGGTTGCTCTGCCTGGAATATCATATTCATTGTTACAGAGATTAGGTGCTATAGCGC
rJMSF001P22+ TCCAGGTTGCTCTGCCTGGAATATCATATTCATTGTTACAGAGATTAGGTGCTATAGCGC
rJMFF032A02+ TCCAGGTTGCTCTGCCTGGAATATCATATTCATTGTTACAGAGATTAGGTGCTATAGCGC
____________________________________________________________
consensus TCCAGGTTGCTCTGCCTGGAATATCATATTCATTGTTACAGAGATTAGGTGCTATAGCGC
. : . : . : . : . : . :
rJMFF004I03+ GAAATGGGGCAAAGCTCTTTGCAGTTGGCACCACTTCTTCTTTGGTTGGTACCCTTGTGA
rJMSF001P22+ GAAATGGGGCAAAGCTCTTTGCAGTTGGCACCACTTCTTCTTTGGTTGGTACCCTTGTGA
rJMFF032A02+ GAAATGGGGCAAAGCTCTTTGCAGTTGGCACCACTTCTTCTTTGGTTGGTACCCTTGTGA
____________________________________________________________
consensus GAAATGGGGCAAAGCTCTTTGCAGTTGGCACCACTTCTTCTTTGGTTGGTACCCTTGTGA
. : . : . : . : . : . :
rJMFF004I03+ CAAATGCAGTGATAAATGCACGGAAAACTGTTGATAAGTCCTCGGCAGAGGGGGTTGAGA
rJMSF001P22+ CAAATGCAGTGATAAATGCACGGAAAACTGTTGATAAGTCCTCGGCAGAGGGGGTTGAGA
rJMFF032A02+ CAAATGCAGTGATAAATGCACGGAAAACTGTTGATAAGTCCTCGGCAGAGGGGGTTGAGA
____________________________________________________________
consensus CAAATGCAGTGATAAATGCACGGAAAACTGTTGATAAGTCCTCGGCAGAGGGGGTTGAGA
. : . : . : . : . : . :
rJMFF004I03+ ACGTACCCGTATTATCGACTAGTTTTGCATATGGTGTCTACATGGCAGTCTCTAGCAACC
rJMSF001P22+ ACGTACCCGTATTATCGACTAGTTTTGCATATGGTGTCTACATGGCAGTCTCTAGCAACC
rJMFF032A02+ ACGTACCCGTATTATCGACTAGTTTTGCATATGGTGTCTACATGGCAGTCTCTAGCAACC
____________________________________________________________
consensus ACGTACCCGTATTATCGACTAGTTTTGCATATGGTGTCTACATGGCAGTCTCTAGCAACC
. : . : . : . : . : . :
rJMFF004I03+ TTCGGTACCAAGTGTTGGCGGGGATTATTGAACAGCGGATGCTAGAGCCTCTGCTGCACC
rJMSF001P22+ TTCGGTACCAAGTGTTGGCGGGGATTATTGAACAGCGGATGCTAGAGCCTCTGCTGCACC
rJMFF032A02+ TTCGGTACCAAGTGTTGGCGGGGATTATTGAACAGCGGATGCTAGAGCCTCTGCTGCACC
____________________________________________________________
consensus TTCGGTACCAAGTGTTGGCGGGGATTATTGAACAGCGGATGCTAGAGCCTCTGCTGCACC
. : . : . : . : . : . :
rJMFF004I03+ AACACAAGTTGGTTCTGAGCGCGCTGTGCTTTGCTGTTCGGACAGGCAACACCTTCTTGG
rJMSF001P22+ AACACAAGTTGGTTCTGAGCGCGCTGTGCTTTGCTGTTCGGACAGGCAACACCTTCTTGG
rJMFF032A02+ AACACAAGTTGGTTCTGAGCGCGCTGTGCTTTGCTGTTCGGACAGGCAACACCTTCTTGG
____________________________________________________________
consensus AACACAAGTTGGTTCTGAGCGCGCTGTGCTTTGCTGTTCGGACAGGCAACACCTTCTTGG
. : . : . : . : . : . :
rJMFF004I03+ GTTCATTATTGTGGGTCGATTACGCACGCTGGATAGGGATTCAAAAGGCGGAAGAAACCG
rJMSF001P22+ GTTCATTATTGTGGGTCGATTACGCACGCTGGATAGGGATTCAAAAGGCGGAAGAAACCG
rJMFF032A02+ GTTCATTATTGTGGGTCGATTACGCACGCTGGATAGGGATTCAAAAGGCGGAAGAAACCG
____________________________________________________________
consensus GTTCATTATTGTGGGTCGATTACGCACGCTGGATAGGGATTCAAAAGGCGGAAGAAACCG
. : . : . : . : . : . :
rJMFF004I03+ AAAGCTAGAGTGAGTTCTCAGGTGAAACGTTTTAGTTCTTCCATTAATGGATGTCTGGTA
rJMSF001P22+ AAAGCTAGAGTGAGTTCTCAGGTGAAACGTTTTAGTTCTTCCATTAATGGATGTCTGGTA
rJMFF032A02+ AAAGCTAGAGTGAGTTCTCAGGTGAAACGTTTTAGTTCTTCCATTAATGGATGTCTGGTA
____________________________________________________________
consensus AAAGCTAGAGTGAGTTCTCAGGTGAAACGTTTTAGTTCTTCCATTAATGGATGTCTGGTA
. : . : . : . : . : . :
rJMFF004I03+ ATTAGTTGACATTACATTACAGAAACTTAGGTCTCTGGAGATTGATTGTTAAATACTTA
rJMSF001P22+ ATTAGTTGACATTACATTACAGAAACTTAGGTCTCTGGAGATTGATTGTTAAATACTTAA
rJMFF032A02+ ATTAGTTGACATTACATTACAGAAACTTAGGTCTCTGGAGATTGATTGTTAAATACTTAA
____________________________________________________________
consensus ATTAGTTGACATTACATTACAGAAACTTAGGTCTCTGGAGATTGATTGTTAAATACTTAA
. : . : . : . : . : . :
rJMSF001P22+ ATGTTAAATTTGCAGTTCATAAGTGGCATACTTAGGAATCCTGTATTAGAATAACT
rJMFF032A02+ ATGTTAAATTTGCAGTTCATAAGTGGCATACTTAGGAATCCTGTATTAGAATAACTTTTT
____________________________________________________________
consensus ATGTTAAATTTGCAGTTCATAAGTGGCATACTTAGGAATCCTGTATTAGAATAACTTTTT