Contig 012339:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031E17Sequence622012339 (5)ref|XP_009785301.1|1e-67PREDICTED: coiled-coil domain-containing protein 115-like isoform X1 [Nicotiana759012339 (5)ref|XP_009785301.1|9e-37PREDICTED: coiled-coil domain-containing protein 115-like isoform X1 [Nicotiana
JMSF044C18Sequence799012339 (5)ref|XP_009785301.1|6e-70PREDICTED: coiled-coil domain-containing protein 115-like isoform X1 [Nicotiana783012339 (5)ref|XP_009785301.1|1e-49PREDICTED: coiled-coil domain-containing protein 115-like isoform X1 [Nicotiana
JMSF045C18Sequence713012339 (5)ref|XP_009785301.1|3e-35PREDICTED: coiled-coil domain-containing protein 115-like isoform X1 [Nicotiana

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF031E17- AATCACAATGCCGGCCATGGCGGATGAAACGGAAACGAAAATCTCTGACG
JMSF044C18- CAATGCCGGCCATGGCGGATGAAACGGAAACGAAAATCTCTGACG
                      ____________________________________________________________
consensus AATCACAATGCCGGCCATGGCGGATGAAACGGAAACGAAAATCTCTGACG
 
. : . : . : . : . : . :
JMFF031E17- ATGGAGAAGAAGGAATTGTAGAAAAAGACGCAAAAGTATTAAATTTTCTCGATTCATTGG
JMSF044C18- ATGGAGAAGAAGGAATTGTAGAAAAAGACGCAAAAGTATTAAATTTTCTCGATTCATTGG
                      ____________________________________________________________
consensus ATGGAGAAGAAGGAATTGTAGAAAAAGACGCAAAAGTATTAAATTTTCTCGATTCATTGG
 
. : . : . : . : . : . :
JMFF031E17- ATAGCTATCTGATTCTCATGGACACTTTATCTTCAACACTTCGCCAGGGATGTCTGGAGT
JMSF044C18- ATAGCTATCTGATTCTCATGGACACTTTATCTTCAACACTTCGCCAGGGATGTCTGGAGT
                      ____________________________________________________________
consensus ATAGCTATCTGATTCTCATGGACACTTTATCTTCAACACTTCGCCAGGGATGTCTGGAGT
 
. : . : . : . : . : . :
JMFF031E17- TGGCTAGTGCTCGACTTTCTATGGGTGCGTCACGCATCAACAGCTCATTGCTTGACCTCA
JMSF044C18- TGGCTAGTGCTCGACTTTCTATGGGTGCGTCACGCATCAACAGCTCATTGCTTGACCTCA
rJMSF044C18+ TTCTATGGGTGCGTCACGCATCAACAGCTCATTGCTTGACCTCA
                      ____________________________________________________________
consensus TGGCTAGTGCTCGACTTTCTATGGGTGCGTCACGCATCAACAGCTCATTGCTTGACCTCA
 
. : . : . : . : . : . :
JMFF031E17- AACCACATTCTGCCTCAACTACATTGGAAATTGATCATTTGGAAGGATCCAGGATGGAGC
JMSF044C18- AACCACATTCTGCCTCAACTACATTGGAAATTGATCATTTGGAAGGATCCAGGATGGAGC
rJMSF045C18+ GGAAGGATCCAGGATGGAGC
rJMSF044C18+ AACCACATTCTGCCTCAACTACATTGGAAATTGATCATTTGGAAGGATCCAGGATGGAGC
rJMFF031E17+ ACATTGGAAATTGATCATTTGGAAGGATCCAGGATGGAGC
                      ____________________________________________________________
consensus AACCACATTCTGCCTCAACTACATTGGAAATTGATCATTTGGAAGGATCCAGGATGGAGC
 
. : . : . : . : . : . :
JMFF031E17- AGGTGCATTTCAGATTATGCAAGTGGGTTTCTTCTGCTAGTCCAGAAAGCTCACCCAAGG
JMSF044C18- AGGTGCATTTCAGATTATGCAAGTGGGTTTCTTCTGCTAGTCCAGAAAGCTCACCCAAGG
rJMSF045C18+ AGGTGCATTTCAGATTATGCAAGTGGGTTTCTTNTGCTAGTCCAGAAAGCTCACCCAAGG
rJMSF044C18+ AGGTGCATTTCAGATTATGCAAGTGGGTTTCTTCTGCTAGTCCAGAAAGCTCACCCAAGG
rJMFF031E17+ AGGTGCATTTCAGATTATGCAAGTGGGTTTCTTCTGCTAGTCCAGAAAGCTCACCCAAGG
                      ____________________________________________________________
consensus AGGTGCATTTCAGATTATGCAAGTGGGTTTCTTCTGCTAGTCCAGAAAGCTCACCCAAGG
 
. : . : . : . : . : . :
JMFF031E17- AAGGTAAATATGATGAGGACAAGCTGTTGCATAGAAAATCTCACAGTCCAGAGTCCACGC
JMSF044C18- AAGGTAAATATGATGAGGACAAGCTGTTGCATAGAAAATCTCACAGTCCAGAGTCCACGC
rJMSF045C18+ AAGGTAAATATGATGAGGACAAGCTGTTGCATAGAAAATCTCACAGTCCAGAGTCCACGC
rJMSF044C18+ AAGGTAAATATGATGAGGACAAGCTGTTGCATAGAAAATCTCACAGTCCAGAGTCCACGC
rJMFF031E17+ AAGGTAAATATGATGAGGACAAGCTGTTGCATAGAAAATCTCACAGTCCAGAGTCCACGC
                      ____________________________________________________________
consensus AAGGTAAATATGATGAGGACAAGCTGTTGCATAGAAAATCTCACAGTCCAGAGTCCACGC
 
. : . : . : . : . : . :
JMFF031E17- ACCATGGTGATGATTCTGAAGCTCAGGGGAAGAAGCAAGAAAGTAATGGATCTCCGCGAG
JMSF044C18- ACCATGGTGATGATTCTGAAGCTCAGGGGAAGAAGCAAGAAAGTAATGGATCTCCGCGAG
rJMSF045C18+ ACCATGGTGATGATTCTGAAGCTCAGGGGAAGAAGCAAGAAAGTAATGGATCTCCGCGAG
rJMSF044C18+ ACCATGGTGATGATTCTGAAGCTCAGGGGAAGAAGCAAGAAAGTAATGGATCTCCGCGAG
rJMFF031E17+ ACCATGGTGATGATTCTGAAGCTCAGGGGAAGAAGCAAGAAAGTAATGGATCTCCGCGAG
                      ____________________________________________________________
consensus ACCATGGTGATGATTCTGAAGCTCAGGGGAAGAAGCAAGAAAGTAATGGATCTCCGCGAG
 
. : . : . : . : . : . :
JMFF031E17- ACCAAGCTCAGAGAGAGCGGCTCAAATCACTATCTATGTTTGGAATGCTGGTTTCTCCAA
JMSF044C18- ACCAAGCTCAGAGAGAGCGGCTCAAATCACTATCTATGTTTGGAATGCTGGTTTCTCCAA
rJMSF045C18+ ACCAAGCTCAGAGAGAGCGGCTCAAATCACTATCTATGTTTGGAATGCTGGTTTCTCCAA
rJMSF044C18+ ACCAAGCTCAGAGAGAGCGGCTCAAATCACTATCTATGTTTGGAATGCTGGTTTCTCCAA
rJMFF031E17+ ACCAAGCTCAGAGAGAGCGGCTCAAATCACTATCTATGTTTGGAATGCTGGTTTCTCCAA
                      ____________________________________________________________
consensus ACCAAGCTCAGAGAGAGCGGCTCAAATCACTATCTATGTTTGGAATGCTGGTTTCTCCAA
 
. : . : . : . : . : . :
JMFF031E17- AGCTTCGTGCTGCCCAACTTTCATATGAGACAGCTCTGGATACTATCATAGAAATAGCAA
JMSF044C18- AGCTTCGTGCTGCCCAACTTTCATATGAGACAGCTCTGGATACTATCATAGAAATAGCAA
rJMSF045C18+ AGCTTCGTGCTGCCCAACTTTCATATGAGACAGCTCTGGATACTATCATAGAAATAGCAA
rJMSF044C18+ AGCTTCGTGCTGCCCAACTTTCATATGAGACAGCTCTGGATACTATCATAGAAATAGCAA
rJMFF031E17+ AGCTTCGTGCTGCCCAACTTTCATATGAGACAGCTCTGGATACTATCATAGAAATAGCAA
                      ____________________________________________________________
consensus AGCTTCGTGCTGCCCAACTTTCATATGAGACAGCTCTGGATACTATCATAGAAATAGCAA
 
. : . : . : . : . : . :
JMFF031E17- ACATGCGAACATCACTGCTGCATGCGTAC
JMSF044C18- ACATGCGAACATCACTGCTGCATGCGTACAATCAAGTGGTGGAAGATATGAAAGTCACTC
rJMSF045C18+ ACATGCGAACATCACTGCTGCATGCGTACAATCAAGTGGTGGAAGATATGAAAGTCACTC
rJMSF044C18+ ACATGCGAACATCACTGCTGCATGCGTACAATCAAGTGGTGGAAGATATGAAAGTCACTC
rJMFF031E17+ ACATGCGAACATCACTGCTGCATGCGTACAATCAAGTGGTGGAAGATATGAAAGTCACTC
                      ____________________________________________________________
consensus ACATGCGAACATCACTGCTGCATGCGTACAATCAAGTGGTGGAAGATATGAAAGTCACTC
 
. : . : . : . : . : . :
JMSF044C18- CAAATGACTAGAGCTTATGTACCCGGGATGACTTTTCATTGGAAGGAATCGAG-TTGTTT
rJMSF045C18+ CAAATGACTAGAGCTTATGTACCCGGGATGACTTTTCATTGGAAGGAATCGAG-TTGTTT
rJMSF044C18+ CAAATGACTAGAGCTTATGTACCCGGGATGACTTTTCATTGGAAGGAATCGAG-TTGTTT
rJMFF031E17+ CAAATGACTAGAGCTTATGTACCCGGGATGACTTTTCATTGGAAGGAATCGAGTTTGTTT
                      ____________________________________________________________
consensus CAAATGACTAGAGCTTATGTACCCGGGATGACTTTTCATTGGAAGGAATCGAG-TTGTTT
 
. : . : . : . : . : . :
JMSF044C18- ATTTTCTAATCTAAATTTAGAGCATTTGAAGCTCCTCACACCTCATCTGCTTGGTTCTCC
rJMSF045C18+ ATTTTCTAATCTAAATTTAGAGCATTTGAAGCTCCTCACACCTCATCTGCTTGGTTCTCC
rJMSF044C18+ ATTTTCTAATCTAAATTTAGAGCATTTGAAGCTCCTCACACCTCATCTGCTTGGTTCTCC
rJMFF031E17+ ATTTTCTAATCTAAATTTAGAGCATTTGAAGCTCCTCACACCTCATCTGCTTGGTTCTCC
                      ____________________________________________________________
consensus ATTTTCTAATCTAAATTTAGAGCATTTGAAGCTCCTCACACCTCATCTGCTTGGTTCTCC
 
. : . : . : . : . : . :
JMSF044C18- TCCAAAATCTATCTCGCAAACCATTTTGACTTG
rJMSF045C18+ TCCAAAATCTATCTCGCAAACCATTTTGACTTGCTTGGTGGATGTATGCTCGATTTTTGT
rJMSF044C18+ TCCAAAATCTATCTCGCAAACCATTTTGACTTGCTTGGTGGATGTATGCTCGATTTTTGT
rJMFF031E17+ TCCAAAATCTATCTCGCAAACCATTTTGACTTGCTTGGTGGATGTATGCTCGATTTTTGT
                      ____________________________________________________________
consensus TCCAAAATCTATCTCGCAAACCATTTTGACTTGCTTGGTGGATGTATGCTCGATTTTTGT
 
. : . : . : . : . : . :
rJMSF045C18+ AAAAGATTGTAGCTTAGCTAGAAATCACAGTTAAGCTTATCATATAGTTAATGATGGTAG
rJMSF044C18+ AAAAGATTGTAGCTTAGCTAGAAATCACAGTTAAGCTTATCATATAGTTAATGATGGTAG
rJMFF031E17+ AAAAGATTGTAGCTTAGCTAGAAATCACAGTTAAGCTTATCATATAGTTAATGATGGTAG
                      ____________________________________________________________
consensus AAAAGATTGTAGCTTAGCTAGAAATCACAGTTAAGCTTATCATATAGTTAATGATGGTAG
 
. : . : . : . : . : . :
rJMSF045C18+ GCTGTAGCATTGCCTGCCTTTCTTTATGACAGTCAAATGCAGAAAGTCCAGTCTGTAAAT
rJMSF044C18+ GCTGTAGCATTGCCTGCCTTTCTTTATGACAGTCAAATGCAGAAAGT-CAGTCTGTAAAT
rJMFF031E17+ GCTGTAGCATTGCCTGCCTTTCTTTATGACAGTCAAATGCAGAAAGT-CAGTCTGTAAAT
                      ____________________________________________________________
consensus GCTGTAGCATTGCCTGCCTTTCTTTATGACAGTCAAATGCAGAAAGT-CAGTCTGTAAAT
 
. : . : . : . : . : . :
rJMSF045C18+ TTTTATACATGCATTCATCTT
rJMSF044C18+ TTTTATACATGCATTCATCTT
rJMFF031E17+ TTTTATACATGCATTCATCTTTGATGTTATGTACTTTTCTATCGTAATAAACTGTCCCTT
                      ____________________________________________________________
consensus TTTTATACATGCATTCATCTTTGATGTTATGTACTTTTCTATCGTAATAAACTGTCCCTT