Contig 012338:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I05Sequence547006715 (15)ref|XP_009762874.1|7e-49PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]794012338 (13)ref|XP_009791823.1|4e-102PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF003E17Sequence486006715 (15)ref|XP_009762874.1|7e-37PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]689012338 (13)ref|XP_009791823.1|2e-74PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF009F02Sequence556006715 (15)ref|XP_009762874.1|6e-53PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]676012338 (13)ref|XP_009791823.1|2e-74PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF012M14Sequence513006715 (15)ref|XP_009620452.1|4e-80PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]786012338 (13)ref|XP_009598217.1|2e-85PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF023J03Sequence491006715 (15)ref|XP_009762874.1|1e-42PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]800012338 (13)ref|XP_009791823.1|2e-103PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF030J16Sequence586006715 (15)ref|XP_009620452.1|2e-61PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]696012338 (13)ref|XP_009598217.1|1e-77PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF030N08Sequence512006715 (15)ref|XP_009762874.1|2e-46PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]761012338 (13)emb|CDP01289.1|2e-06unnamed protein product [Coffea canephora]
JMFF042C17Sequence620006715 (15)ref|XP_009620452.1|3e-68PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]618012338 (13)ref|XP_009791823.1|2e-55PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF044C08Sequence639006715 (15)ref|XP_009620452.1|3e-67PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]652012338 (13)ref|XP_009598217.1|1e-50PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF047A05Sequence472006715 (15)ref|XP_009762874.1|1e-38PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]416012338 (13)ref|XP_009598217.1|5e-12PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF049L07Sequence646006715 (15)ref|XP_009620452.1|2e-67PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]650012338 (13)ref|XP_009598217.1|5e-46PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMSF013E21Sequence208006715 (15)769012338 (13)ref|XP_009598217.1|8e-102PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMSF046O03Sequence749006715 (15)ref|XP_009620452.1|5e-88PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]679012338 (13)ref|XP_009598217.1|4e-79PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF001I05+                             ATTGATGGATGGAAANCAAATAGGATAAGTGATGATGGGTT
rJMFF012M14+                                  TGGATGGAAANCAAATAGGATAAGTGATGATGGGTT
rJMSF013E21+                                  TGGATGGAAAACAAATAGGATAAGTGATGATGGGTT
rJMFF023J03+                    AAGCTTCATATTGATGGATGGAAANCAAATAGGATAAGTGATGATGGGTT
                      ____________________________________________________________
consensus                       AAGCTTCATATTGATGGATGGAAAACAAATAGGATAAGTGATGATGGGTT
 
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rJMFF001I05+          GCTTGCTGTGGCAAAGCACTG-CCCCAATTTACAAGAATTGGTTTTGATTGGAGTGAATC
rJMSF046O03+                                                            GGAGTGAATC
rJMFF012M14+          GCTTGCTGTGGCAAAGCACTGCCCCCAATTTACAAGAATTGGTTTTGATTGGAGTGAATC
rJMSF013E21+          GCTTGCTGTGGCAAAGCACTG-CCCCAATTTACAAGAATTGGTTTTGATTGGAGTGAATC
rJMFF023J03+          GCTTGCTGTGGCAAAGCACTG-CCCCAATTTACAAGAATTGGTTTTGATTGGAGTGAATC
rJMFF030J16+                                                                 GAATC
                      ____________________________________________________________
consensus             GCTTGCTGTGGCAAAGCACTG-CCCCAATTTACAAGAATTGGTTTTGATTGGAGTGAATC
 
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rJMFF001I05+          CAACTCGAACTAGTTTAGAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
rJMSF046O03+          CAACTCGAACTAGTTTAGAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
rJMFF012M14+          CAACTCGAACTAGTTTAGAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
rJMSF013E21+          CAACTCGAACTAGTTTAGAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
rJMFF023J03+          CAACTCGAACTAGTTTAGAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
rJMFF009F02+                         TAGAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
rJMFF030J16+          CAACTCGAACTAGTTTAGAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
rJMFF003E17+                           GAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
                      ____________________________________________________________
consensus             CAACTCGAACTAGTTTAGAGAAACTGGCTACAAATTGTGTAAATTTAGAAAGGTTAGCTT
 
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rJMFF001I05+          TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
rJMSF046O03+          TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
rJMFF012M14+          TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
rJMSF013E21+          TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
rJMFF023J03+          TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
rJMFF009F02+          TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
rJMFF030J16+          TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
rJMFF003E17+          TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
rJMFF042C17+                                               CTGTATTGCTGCAAAATGCACTG
rJMFF044C08+                                                                    TG
                      ____________________________________________________________
consensus             TGTGTGGGAGCGAGACTGTTGGTGACCCAGAGCTCTCCTGTATTGCTGCAAAATGCACTG
 
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rJMFF001I05+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMSF046O03+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMFF012M14+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMSF013E21+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMFF023J03+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMFF009F02+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMFF030J16+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMFF003E17+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMFF042C17+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMFF044C08+          CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
rJMFF049L07+                                       CCCGTGTCAGACCAGGGAATGGAAGCTCTTG
                      ____________________________________________________________
consensus             CATTGAAGAAACTTTGTATAAAGAGTTGCCCCGTGTCAGACCAGGGAATGGAAGCTCTTG
 
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rJMFF001I05+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMSF046O03+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMFF012M14+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMSF013E21+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMFF023J03+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMFF009F02+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMFF030J16+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMFF003E17+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMFF042C17+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMFF044C08+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
rJMFF049L07+          CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
                      ____________________________________________________________
consensus             CCAGTGGGTGTCCAAACTTGATCAAGGTGAAGGTTAAGAAATGCAGATTGGTAACTACCG
 
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rJMFF001I05+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMSF046O03+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMFF012M14+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMSF013E21+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMFF023J03+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMFF009F02+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMFF030J16+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMFF003E17+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMFF042C17+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMFF047A05+                                                                   CTG
rJMFF044C08+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
rJMFF049L07+          AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
                      ____________________________________________________________
consensus             AGGGTGCAGATTGGTTGAGGGCAAGTAGGGGTTCCATTGCCGTGAATTTAGATACTACTG
 
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rJMFF001I05+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMSF046O03+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMFF012M14+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMSF013E21+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMFF023J03+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMFF009F02+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMFF030J16+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMFF003E17+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMFF042C17+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMFF047A05+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCNTGAAGTTGGCCAGGAGA
rJMFF044C08+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
rJMFF049L07+          AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
                      ____________________________________________________________
consensus             AGTTGGAGAATCCTGATGGGGCTGCTAGTGATGGTGGTGCCCCTGAAGTTGGCCAGGAGA
 
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rJMFF001I05+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMSF046O03+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF012M14+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMSF013E21+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF023J03+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF009F02+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF030J16+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF003E17+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF042C17+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF047A05+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF044C08+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF049L07+          ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
rJMFF030N08+                          CCAAGATGNCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
                      ____________________________________________________________
consensus             ATCGGCAGTTGGGTGGCCAAGATGGCAGTGGTAGTATTGCATCAAGCAGTAATGGAAGAT
 
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rJMFF001I05+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMSF046O03+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF012M14+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMSF013E21+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF023J03+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF009F02+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF030J16+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF003E17+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF042C17+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF047A05+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF044C08+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF049L07+          CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
rJMFF030N08+          CACCCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
                      ____________________________________________________________
consensus             CAACCTCCTTCAAAGCAAGGTTAGGGCTTATTACAGGGCGGAATTTGGTTGCGTGCACAT
 
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rJMFF001I05+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMSF046O03+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF012M14+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMSF013E21+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF023J03+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF009F02+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF030J16+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF003E17+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF042C17+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF047A05+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF044C08+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF049L07+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
rJMFF030N08+          TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
                      ____________________________________________________________
consensus             TCAGAAGGTGGTCAAGCTTTGGTGGAAATTCCAGGAATAATTAGACAAAGGAACTGGTTG
 
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rJMFF001I05+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMSF046O03+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF012M14+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMSF013E21+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF023J03+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF009F02+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF030J16+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF003E17+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF042C17+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF047A05+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF044C08+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF049L07+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
rJMFF030N08+          ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
                      ____________________________________________________________
consensus             ATTTGGAGTGGAGAACAACACTTCTGATCTATTCAAATTGTTTTGTGTTGTAGTGATTTT
 
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rJMFF001I05+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMSF046O03+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF012M14+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMSF013E21+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF023J03+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF009F02+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF030J16+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF003E17+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF042C17+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF047A05+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF044C08+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF049L07+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
rJMFF030N08+          CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
                      ____________________________________________________________
consensus             CTGTTTGTCTTTGTGTTTCTAATTTGGCTGCTCTGTTTTAATGCCTTCCATAGATTACAT
 
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rJMFF001I05+          TTTTATGTGTGGAAGTCTGATTCTATAACA                              
rJMSF046O03+          TTTTATGTG                                                   
rJMFF012M14+          TTTTATGTGTGGAAGTCTGATTCTATAACA                              
rJMSF013E21+          TTTTATGTG                                                   
rJMFF023J03+          TTTTATGTGTGGAAGTCTGATTCTATAACAT                             
rJMFF009F02+          TTTTATGTGTGGAAGTCTGATTCTATAACA                              
rJMFF030J16+          TTTTATGTGTGGAAGTCTGATTCTATAACAT                             
rJMFF003E17+          TTTTATGTGTGGAAGTCTGATTCTATAACATGTCTGAAATAGTGCT              
rJMFF042C17+          TTTTATGTGTGGAAGTCTGATTCTATAACATGTCTGAAATAGTGCTTTGTTCTTC     
rJMFF047A05+          TTTTATGTGTGGAAGTCTGATTCTATAACATGTCTGAAATAGTGCTTTGTTCT       
rJMFF044C08+          TTTTATGTGTGGAAGTCTGATTCTATAACATGTCTGAAATAGTGCTTTGTTCTTCACTGT
rJMFF049L07+          TTTTATGTGTGGAAGTCTGATTCTATAACATGTCTGAAATAGTGCTTTGTTCTTCACTGT
rJMFF030N08+          TTTTATGTGTGGAAGTCTGATTCTATAACATGTCTGAAATAGTGCTTTGTTCTTCACTGT
                      ____________________________________________________________
consensus             TTTTATGTGTGGAAGTCTGATTCTATAACATGTCTGAAATAGTGCTTTGTTCTTCACTGT
 
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rJMFF044C08+          GTGCTACCCAAAA                                               
rJMFF049L07+          GTGCTACCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG          
rJMFF030N08+          GTGCTACCCAAAATGCTAGACTGA---TAACAGTTGAATGGGGAATAGGTTGTTGCTGTT
                      ____________________________________________________________
consensus             GTGCTACCCAAAATGCTAGACTGAACTTTCCAGTTTGATGGGGCATAGGTTGTTGCTGTT
 
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rJMFF030N08+          CTTTAATCACTTGGGAAAAACTAATTTGCAATGTGGAATTCTTCTGTCACACAGCCAAGA
                      ____________________________________________________________
consensus             CTTTAATCACTTGGGAAAAACTAATTTGCAATGTGGAATTCTTCTGTCACACAGCCAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030N08+          GGAATATCAGCACTCTTCTAGCAATGATAGACAACAGAGAAACTTCCTCTTTTCAAATCT
                      ____________________________________________________________
consensus             GGAATATCAGCACTCTTCTAGCAATGATAGACAACAGAGAAACTTCCTCTTTTCAAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030N08+          CTATATTCTATGCTCCGATTTTCAGCATGATCTGGATTTAATGCGTATGACTGTCTTCTT
                      ____________________________________________________________
consensus             CTATATTCTATGCTCCGATTTTCAGCATGATCTGGATTTAATGCGTATGACTGTCTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030N08+          GTCCTCGTAGCTGTATATCTTATATTTAATTGCTGTCTATAGTTTCTGCTGCCTGGTAAG
                      ____________________________________________________________
consensus             GTCCTCGTAGCTGTATATCTTATATTTAATTGCTGTCTATAGTTTCTGCTGCCTGGTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030N08+          CCAGCCTGCAATGTTAATTTTATTTCTCCAATATCTTGGAGGGATGTAAAAATGCCATTT
                      ____________________________________________________________
consensus             CCAGCCTGCAATGTTAATTTTATTTCTCCAATATCTTGGAGGGATGTAAAAATGCCATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030N08+          TGAATGGTGTTTGCTTATAGGTTTGATACTTGCATCCAGTGCATAGGAATCTGTTATCTT
                      ____________________________________________________________
consensus             TGAATGGTGTTTGCTTATAGGTTTGATACTTGCATCCAGTGCATAGGAATCTGTTATCTT