Contig 012337:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006J15Sequence586003076 (2)ref|XP_004252189.1|4e-35PREDICTED: protease Do-like 9 [Solanum lycopersicum]823012337 (2)emb|CDP16995.1|1e-103unnamed protein product [Coffea canephora]
JMFF030K12Sequence560003076 (2)ref|XP_004252189.1|3e-32PREDICTED: protease Do-like 9 [Solanum lycopersicum]687012337 (2)emb|CDP16995.1|2e-53unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF006J15+                                                                    TT
                      ____________________________________________________________
consensus                                                                       TT
 
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rJMFF006J15+          CAGCAATTAAAGTTCTTCGCAATTGTGAGACCCACACATTTAATATCAAACTTGCAAGTC
                      ____________________________________________________________
consensus             CAGCAATTAAAGTTCTTCGCAATTGTGAGACCCACACATTTAATATCAAACTTGCAAGTC
 
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rJMFF006J15+          ACAAGAGGTTGATTCCAGCTCACAACAAGGGCAAGCCTCCCTCATATTATATTATAGCTG
                      ____________________________________________________________
consensus             ACAAGAGGTTGATTCCAGCTCACAACAAGGGCAAGCCTCCCTCATATTATATTATAGCTG
 
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rJMFF006J15+          GATTTGTTTTTACAACTGTGTCAGTTCCGTATCTTCGTTCAGAGTATGGAAAGGATTATG
                      ____________________________________________________________
consensus             GATTTGTTTTTACAACTGTGTCAGTTCCGTATCTTCGTTCAGAGTATGGAAAGGATTATG
 
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rJMFF006J15+          AGTATGAATCTCCTGTCAAACTTTTGGACAAGCTTTTGCATGAATTGCCACAATCACCAG
rJMFF030K12+                                          CTTTTGCATGAATTGCCACAATCACCAG
                      ____________________________________________________________
consensus             AGTATGAATCTCCTGTCAAACTTTTGGACAAGCTTTTGCATGAATTGCCACAATCACCAG
 
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rJMFF006J15+          ATGAACAGATAGTCGTAGTTTCTCAGGTGCTTGTGGCTGACATCAATATAGGATATGAGG
rJMFF030K12+          ATGAACAGATAGTCGTAGTTTCTCAGGTGCTTGTGGCTGACATCAATATAGGATATGAGG
                      ____________________________________________________________
consensus             ATGAACAGATAGTCGTAGTTTCTCAGGTGCTTGTGGCTGACATCAATATAGGATATGAGG
 
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rJMFF006J15+          ACATTGTCAACACTCAGGTACTTGCTTTCAATGGTCTTCCTGTGAAGAATTTGAAGGGCT
rJMFF030K12+          ACATTGTCAACACTCAGGTACTTGCTTTCAATGGTCTTCCTGTGAAGAATTTGAAGGGCT
                      ____________________________________________________________
consensus             ACATTGTCAACACTCAGGTACTTGCTTTCAATGGTCTTCCTGTGAAGAATTTGAAGGGCT
 
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rJMFF006J15+          TAGCCAACATGGTTGAGAATTGTAATGATGAATTTTTGAAGTTTGATTTGGAATACCAAC
rJMFF030K12+          TAGCCAACATGGTTGAGAATTGTAATGATGAATTTTTGAAGTTTGATTTGGAATACCAAC
                      ____________________________________________________________
consensus             TAGCCAACATGGTTGAGAATTGTAATGATGAATTTTTGAAGTTTGATTTGGAATACCAAC
 
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rJMFF006J15+          AGGTAGTGGTCCTCCAGACAAAGACAGCAAAGGCCGCGACATTGGACATCCTTACTACAC
rJMFF030K12+          AGGTAGTGGTCCTCCAGACAAAGACAGCAAAGGCCGCGACATTGGACATCCTTACTACAC
                      ____________________________________________________________
consensus             AGGTAGTGGTCCTCCAGACAAAGACAGCAAAGGCCGCGACATTGGACATCCTTACTACAC
 
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rJMFF006J15+          ATTGTATACCCTCCGCAATGTCTGATGATCTTAACGCATAAGACTATATTACTATGGAAT
rJMFF030K12+          ATTGTATACCCTCCGCAATGTCTGATGATCTTAAGGCATAAGACTATATTACTATGGAAT
                      ____________________________________________________________
consensus             ATTGTATACCCTCCGCAATGTCTGATGATCTTAAGGCATAAGACTATATTACTATGGAAT
 
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rJMFF006J15+          GCATCATGATTCTTCCTTCCATTTGGCTCTACGGTATTCATCTATAGTTCTGTTTTCTAA
rJMFF030K12+          GCATCATGATTCTTCCTTCCATTTGGCTCTACGGTATTCATCTATAGTTCTGTTTTCTAA
                      ____________________________________________________________
consensus             GCATCATGATTCTTCCTTCCATTTGGCTCTACGGTATTCATCTATAGTTCTGTTTTCTAA
 
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rJMFF006J15+          GTTTTCATCAAAGACCGTATTGGAGCATCAGAATTTTAGAAAATTATAGCTAGCAATTTT
rJMFF030K12+          G-TTTCATCAAAGACCGTATTGGAGCATCAGAATTTTAGAAAATTATAGCTAGCAATTTT
                      ____________________________________________________________
consensus             GTTTTCATCAAAGACCGTATTGGAGCATCAGAATTTTAGAAAATTATAGCTAGCAATTTT
 
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rJMFF006J15+          GACTTGCTAGTAGTTTTTGCCTTAATGGTAATTAGCATTTTCGGAACTGATTGTCTTAAA
rJMFF030K12+          GACTTGCTAGTAGTTTTTGCCTTAATGGTAATTAGCATTTTCGGAACTGATTGTCTTAAA
                      ____________________________________________________________
consensus             GACTTGCTAGTAGTTTTTGCCTTAATGGTAATTAGCATTTTCGGAACTGATTGTCTTAAA
 
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rJMFF006J15+          ATTCGAAAGTTCATAGGGTCTTGGATCACTGGGTAGCAATGTTCTTTTCTAGATTATTGT
rJMFF030K12+          ATTCGAAAGTTCATAGGGTCTTGGATCACTGGGTAGCAATGTTCTTTTCTAGATTATTGT
                      ____________________________________________________________
consensus             ATTCGAAAGTTCATAGGGTCTTGGATCACTGGGTAGCAATGTTCTTTTCTAGATTATTGT
 
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rJMFF006J15+          TAGTCATTCATGTGTACATTGATGATAGTTGTT                           
rJMFF030K12+          TAGTCATTCATGTGTACATTGATGATAGTTGTTTACAAGAATTAGTAGAAGTTAATCAAT
                      ____________________________________________________________
consensus             TAGTCATTCATGTGTACATTGATGATAGTTGTTTACAAGAATTAGTAGAAGTTAATCAAT
 
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rJMFF030K12+          ATGCACATGCCATATATTAAGAATTGCTTATGATGGTTGCCCATTCCAAGGTAGCATGGC
                      ____________________________________________________________
consensus             ATGCACATGCCATATATTAAGAATTGCTTATGATGGTTGCCCATTCCAAGGTAGCATGGC