Contig 012332:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J16Sequence505011473 (8)gb|EYU24503.1|7e-102hypothetical protein MIMGU_mgv1a023808mg, partial [Erythranthe guttata]761012332 (3)ref|XP_009617416.1|2e-46PREDICTED: uncharacterized protein LOC104109764 isoform X1 [Nicotiana tomentosi
JMFF009G03Sequence502011473 (8)735012332 (3)gb|KDO62791.1|3e-42hypothetical protein CISIN_1g0017831mg, partial [Citrus sinensis] gb|KDO62792.1|
JMFF029I09Sequence434011473 (8)755012332 (3)ref|XP_009617416.1|5e-46PREDICTED: uncharacterized protein LOC104109764 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF003J16+ TTTTTNCAGGAATATTAACTGGGACACACTGGCAAGACAGAAG
rJMFF009G03+ ACACTGNCAAGACAGAAG
rJMFF029I09+ AGGAATATTAACTGGGACACACTGGCAAGACAGAAG
                      ____________________________________________________________
consensus TTTTTNCAGGAATATTAACTGGGACACACTGGCAAGACAGAAG
 
. : . : . : . : . : . :
rJMFF003J16+ GCTGCATTTGTGCNTACATCAGAGAGTGCCTTGGATACAAGTTACTTCACCAGTCGCTTC
rJMFF009G03+ GCTGCATTTGTGCCTACATCAGAGAGTGCCTTGGATACAAGTTACTTCACCAGTCGCTTC
rJMFF029I09+ GCTGCATTTGTGCNTACATCAGAGAGTGCCTTGGATACAAGTTACTTCACCAGTCGCTTC
                      ____________________________________________________________
consensus GCTGCATTTGTGCCTACATCAGAGAGTGCCTTGGATACAAGTTACTTCACCAGTCGCTTC
 
. : . : . : . : . : . :
rJMFF003J16+ TCCTGGAATACTTCAGATGAACGTGTATTAGCAACCAGTGATTTTGAGTATTCAAGTGAT
rJMFF009G03+ TCCTGGAATACTTCAGATGAACGTGTATTAGCAACCAGTGATTTTGAGTATTCAAGTGAT
rJMFF029I09+ TCCTGGAATACTTCAGATGAACGTGTATTAGCAACCAGTGATTTTGAGTATTCAAGTGAT
                      ____________________________________________________________
consensus TCCTGGAATACTTCAGATGAACGTGTATTAGCAACCAGTGATTTTGAGTATTCAAGTGAT
 
. : . : . : . : . : . :
rJMFF003J16+ AATGGTAGCATAAGTGGTAGCAGTAGTTGCCTAAGTCGTCATGATGAACTGGGTGATGAA
rJMFF009G03+ AATGGTAGCATAAGTGGTAGCAGTAGTTGCCTAAGTCGTCATGATGAACTGGGTGATGAA
rJMFF029I09+ AATGGTAGCATAAGTGGTAGCAGTAGTTGCCTAAGTCGTCATGATGAACTGGGTGATGAA
                      ____________________________________________________________
consensus AATGGTAGCATAAGTGGTAGCAGTAGTTGCCTAAGTCGTCATGATGAACTGGGTGATGAA
 
. : . : . : . : . : . :
rJMFF003J16+ TGCGGGGGCCTTGCGGACTATGCAGAGTTTGAGTCAGGCTCTCCGATCAATTATTCTTTC
rJMFF009G03+ TGCGGGGGCCTTGCGGACTATGCAGAGTTTGAGTCAGGCTCTCCGATCAATTATTCTTTC
rJMFF029I09+ TGCGGGGGCCTTGCGGACTATGCAGAGTTTGAGTCAGGCTCTCCGATCAATTATTCTTTC
                      ____________________________________________________________
consensus TGCGGGGGCCTTGCGGACTATGCAGAGTTTGAGTCAGGCTCTCCGATCAATTATTCTTTC
 
. : . : . : . : . : . :
rJMFF003J16+ AGCAATTTCTCATTCAAGAATCTCTCGCAGCTTGCATCAATCAATTACGATTTGCTTACT
rJMFF009G03+ AGCAATTTCTCATTCAAGAATCTCTCGCAGCTTGCATCAATCAATTACGATTTGCTTACT
rJMFF029I09+ AGCAATTTCTCATTCAAGAATCTCTCGCAGCTTGCATCAATCAATTACGATTTGCTTACT
                      ____________________________________________________________
consensus AGCAATTTCTCATTCAAGAATCTCTCGCAGCTTGCATCAATCAATTACGATTTGCTTACT
 
. : . : . : . : . : . :
rJMFF003J16+ AAAGGGTTGAAGGAAGATCAGCCGACAAATCCTAATCCATGACTATGGAACCATCTTCCG
rJMFF009G03+ AAAGGGTTGAAGGAAGATCAGCCGACAAATCCTAATCCATGACTATGGAACCATCTTCCG
rJMFF029I09+ AAAGGGTTGAAGGAAGATCAGCCGACAAATCCTAATCCATGACTATGGAACCATCTTCCG
                      ____________________________________________________________
consensus AAAGGGTTGAAGGAAGATCAGCCGACAAATCCTAATCCATGACTATGGAACCATCTTCCG
 
. : . : . : . : . : . :
rJMFF003J16+ ATCAAGAATCTGAATTTTGAGTTTTGGGGCCAACAGCTTGAAGCAAGAAGGGGAACCAAT
rJMFF009G03+ ATCAAGAATCTGAATTTTGAGTTTTGGGGCCAACAGCTTGAAGCAAGAAGGGGAACCAAT
rJMFF029I09+ ATCAAGAATCTGAATTTTGAGTTTTGGGGCCAACAGCTTGAAGCAAGAAGGGGAACCAAT
                      ____________________________________________________________
consensus ATCAAGAATCTGAATTTTGAGTTTTGGGGCCAACAGCTTGAAGCAAGAAGGGGAACCAAT
 
. : . : . : . : . : . :
rJMFF003J16+ CCCCTCCCTCTCTGTAAACCTTGTAAATATATAGTTCAGTGCGCAATACATACTGGGATG
rJMFF009G03+ CCCCTCCCTCTCTGTAAACCTTGTAAATATATAGTTCAGTGCGCAATACATACTGGGATG
rJMFF029I09+ CCCCTCCCTCTCTGTAAACCTTGTAAATATATAGTTCAGTGCGCAATACATACTGGGATG
                      ____________________________________________________________
consensus CCCCTCCCTCTCTGTAAACCTTGTAAATATATAGTTCAGTGCGCAATACATACTGGGATG
 
. : . : . : . : . : . :
rJMFF003J16+ TGTTTTGTTGCAGAGTTGAGGTCCATGGTGTGAGGGTTGGGAACATTGTTGGTTGATGAG
rJMFF009G03+ TGTTTTGTTGCAGAGTTGAGGTCCATGGTGTGAGGGTTGGGAACATTGTTGGTTGATGAG
rJMFF029I09+ TGTTTTGTTGCAGAGTTGAGGTCCATGGTGTGAGGGTTGGGAACATTGTTGGTTGATGAG
                      ____________________________________________________________
consensus TGTTTTGTTGCAGAGTTGAGGTCCATGGTGTGAGGGTTGGGAACATTGTTGGTTGATGAG
 
. : . : . : . : . : . :
rJMFF003J16+ TTGTTTTGTTTGTGAGTTGAGTTGAGGTTTTGTGTAATTTTTATCTCATGGTATTGGTAT
rJMFF009G03+ TTGTTTTGTTTGTGAGTTGAGTTGAGGTTTTGTGTAATTTTTATCTCATGGTATTGGTAT
rJMFF029I09+ TTGTTTTGTTTGTGAGTTGAGTTGAGGTTTTGTGTAATTTTTATCTCATGGTATTGGTAT
                      ____________________________________________________________
consensus TTGTTTTGTTTGTGAGTTGAGTTGAGGTTTTGTGTAATTTTTATCTCATGGTATTGGTAT
 
. : . : . : . : . : . :
rJMFF003J16+ GGTCCTTGAGGGAGGAGGATGAGGAGCAGGAGGAGGAGGGCATATTATTGTCTTTTTTCT
rJMFF009G03+ GGTCCTTGAGGGAGGAGGATGAGGAGCAGGAGGAGGAGGGCATATTATTGTCTTTTTTCT
rJMFF029I09+ GGTCCTTGAGGGAGGAGGATGAGGAGCAGGAGGAGGAGGGCATATTATTGTCTTTTTTCT
                      ____________________________________________________________
consensus GGTCCTTGAGGGAGGAGGATGAGGAGCAGGAGGAGGAGGGCATATTATTGTCTTTTTTCT
 
. : . : . : . : . : . :
rJMFF003J16+ CTTTGGCCTTTGATTTTTCAATGCAATGTGAACACATCCCCTCTTGTCGTTAAGGAAT
rJMFF009G03+ CTTTGGCCTTTGA-TTTTCAATGCAATGTGAACACATCCCCTCTTGTCGTTAAGGAAT
rJMFF029I09+ CTTTGGCCTTTGA-TTTTCAATGCAATGTGAACACATCCCCTCTTGTCGTTAAGGAATGG
                      ____________________________________________________________
consensus CTTTGGCCTTTGA-TTTTCAATGCAATGTGAACACATCCCCTCTTGTCGTTAAGGAATGG