Contig 012329:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029C08Sequence561012329 (2)emb|CDP09231.1|8e-11unnamed protein product [Coffea canephora]732012329 (2)ref|XP_006350855.1|6e-75PREDICTED: uncharacterized protein At3g28850-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFF029C08-                                    ATAATTACCCTTCACCCCGCCTTCGCAGCTTTTCC
                      ____________________________________________________________
consensus                                      ATAATTACCCTTCACCCCGCCTTCGCAGCTTTTCC
 
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JMFF029C08-           TCTTCTCAAACTCTGAATTCTCAATCGCCGGCGCCCACCACTTATCTTCTCCGTACCTTC
                      ____________________________________________________________
consensus             TCTTCTCAAACTCTGAATTCTCAATCGCCGGCGCCCACCACTTATCTTCTCCGTACCTTC
 
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JMFF029C08-           AATTTTTTCCAGCCAAAATGTATTGAAACATCAATTCCCAACACCTTAAACTTGTCGAAT
                      ____________________________________________________________
consensus             AATTTTTTCCAGCCAAAATGTATTGAAACATCAATTCCCAACACCTTAAACTTGTCGAAT
 
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JMFF029C08-           TTCTGTTCCGATTTTTGGCAATTTTGAGTATTGATTTCTGAACCAATGTGGCTAACTCGA
                      ____________________________________________________________
consensus             TTCTGTTCCGATTTTTGGCAATTTTGAGTATTGATTTCTGAACCAATGTGGCTAACTCGA
 
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JMFF029C08-           ACCGCATCAAAGAATCGCAGTTCTTCCTCCAAATTCGCCTGCTCTTCCTTCAAAGATATC
                      ____________________________________________________________
consensus             ACCGCATCAAAGAATCGCAGTTCTTCCTCCAAATTCGCCTGCTCTTCCTTCAAAGATATC
 
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JMFF029C08-           TACACCCTCTGCGCCGCCGACGAGCCCACTACCCAGATCCAAACCTATTTCAAGAAACCC
                      ____________________________________________________________
consensus             TACACCCTCTGCGCCGCCGACGAGCCCACTACCCAGATCCAAACCTATTTCAAGAAACCC
 
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JMFF029C08-           AATATCTTCCACCGGGTTTTCCGCGCCAACGCCGTCGTCTCCGCCTTCTTGGCTCCGCCC
                      ____________________________________________________________
consensus             AATATCTTCCACCGGGTTTTCCGCGCCAACGCCGTCGTCTCCGCCTTCTTGGCTCCGCCC
 
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JMFF029C08-           AAGGCCCTCCCCGGGGCCGAGACGAAACCTAATGCCGTACCTTCGCCGGAATCGCCGGTG
rJMFF029C08+                                                          GAATCGCCGGTG
                      ____________________________________________________________
consensus             AAGGCCCTCCCCGGGGCCGAGACGAAACCTAATGCCGTACCTTCGCCGGAATCGCCGGTG
 
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JMFF029C08-           AATTTGGTCGGGCAAACAGAGGGTTCAGAGCCGCCGGGGATATTCCTACCGGGAACCGAG
rJMFF029C08+          AATTTGGTCGGGCAAACAGAGGGTTCAGAGCCGCCGGGGATATTCNTACCGGGAACCGAG
                      ____________________________________________________________
consensus             AATTTGGTCGGGCAAACAGAGGGTTCAGAGCCGCCGGGGATATTCCTACCGGGAACCGAG
 
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JMFF029C08-           AACCAAATCGTCGTATACTTCACGAGCCTCCGAGTGGTCCGCCGGA              
rJMFF029C08+          AACCAAATCGTCGTATACTTCACGAGCCTCCGAGTGGTCCGCCGGACTTTCGAGGACTGC
                      ____________________________________________________________
consensus             AACCAAATCGTCGTATACTTCACGAGCCTCCGAGTGGTCCGCCGGACTTTCGAGGACTGC
 
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rJMFF029C08+          AAGGCCGTCCGGTTGATCTTACGGAGCCTCCGCGTCTCGATCGACGAGCGAGACGTGTCT
                      ____________________________________________________________
consensus             AAGGCCGTCCGGTTGATCTTACGGAGCCTCCGCGTCTCGATCGACGAGCGAGACGTGTCT
 
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rJMFF029C08+          ATGGACGGCGGGTTCACGGAGGAGCTACAGCGCGTTATGGGCGTCGGCGAAACGACGAAA
                      ____________________________________________________________
consensus             ATGGACGGCGGGTTCACGGAGGAGCTACAGCGCGTTATGGGCGTCGGCGAAACGACGAAA
 
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rJMFF029C08+          CTAACCCTGCCGCGGGTTTTCATCGGCGGAAGATACATTGGCGGCGCGAAGGAGATCCGG
                      ____________________________________________________________
consensus             CTAACCCTGCCGCGGGTTTTCATCGGCGGAAGATACATTGGCGGCGCGAAGGAGATCCGG
 
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rJMFF029C08+          CAGCTCCACGAGACCGGCCAGTTGAAGAAGATGGTGAAAGGCCTACCGCCGGCGATTCCA
                      ____________________________________________________________
consensus             CAGCTCCACGAGACCGGCCAGTTGAAGAAGATGGTGAAAGGCCTACCGCCGGCGATTCCA
 
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rJMFF029C08+          GACGCGTGCCAGGTGTGCAGCGGCCACAGATTTATCCTCTGCGACGAGTGCAACGGCAGC
                      ____________________________________________________________
consensus             GACGCGTGCCAGGTGTGCAGCGGCCACAGATTTATCCTCTGCGACGAGTGCAACGGCAGC
 
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rJMFF029C08+          CACAAATGTTACCGGGAAAAAGGCGGATTCCGGAGCTGCACCGCCTGCAACGAGAACGGT
                      ____________________________________________________________
consensus             CACAAATGTTACCGGGAAAAAGGCGGATTCCGGAGCTGCACCGCCTGCAACGAGAACGGT
 
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rJMFF029C08+          CTCATTAGGTGCCCATCTTGTTCCGGCGCGCCGCCGGTGCCGGTGTCGGCGCCGGTGGGA
                      ____________________________________________________________
consensus             CTCATTAGGTGCCCATCTTGTTCCGGCGCGCCGCCGGTGCCGGTGTCGGCGCCGGTGGGA
 
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rJMFF029C08+          TCCCTCAAATTAGACTATTAGCATTCTTGTCAACCAAGACTCTAATTAGGTCGTGACTCC
                      ____________________________________________________________
consensus             TCCCTCAAATTAGACTATTAGCATTCTTGTCAACCAAGACTCTAATTAGGTCGTGACTCC
 
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rJMFF029C08+          TTGAATTGAATTAGGTGGTGAAAAATGAAAATAATTTACACGTTCCTGTTCTTTTTTTTT
                      ____________________________________________________________
consensus             TTGAATTGAATTAGGTGGTGAAAAATGAAAATAATTTACACGTTCCTGTTCTTTTTTTTT
 
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rJMFF029C08+          CTTGTAACGGGCATGTAACTTTAAGATTTCTGTGTTTACCCTCTATTTTAGACAATAATA
                      ____________________________________________________________
consensus             CTTGTAACGGGCATGTAACTTTAAGATTTCTGTGTTTACCCTCTATTTTAGACAATAATA