| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022I11 | Sequence | 480 | 012327 (12) | emb|CDP07667.1| | 3e-63 | unnamed protein product [Coffea canephora] | 306 | 012327 (12) | ref|XP_009631212.1| | 119 | PREDICTED: uncharacterized protein LOC104121022 [Nicotiana tomentosiformis] |
| JMFF023D06 | Sequence | 650 | 012327 (12) | ref|XP_010257521.1| | 187 | PREDICTED: uncharacterized protein LOC104597589 [Nelumbo nucifera] | |||||
| JMFF025N19 | Sequence | 460 | 012327 (12) | emb|CDP07667.1| | 2e-62 | unnamed protein product [Coffea canephora] | 692 | 012327 (12) | ref|XP_002880102.1| | 2e-66 | calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gb|EF |
| JMFF028M24 | Sequence | 401 | 012327 (12) | emb|CDP07667.1| | 3e-46 | unnamed protein product [Coffea canephora] | 736 | 012327 (12) | ref|XP_002880102.1| | 2e-66 | calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gb|EF |
| JMFS012H08 | Sequence | 620 | 012327 (12) | ref|XP_002880102.1| | 8e-67 | calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gb|EF | |||||
| JMSF018P04 | Sequence | 450 | 012327 (12) | ref|XP_010243386.1| | 139 | PREDICTED: uncharacterized protein LOC104587464 [Nelumbo nucifera] | 740 | 012327 (12) | ref|XP_002880102.1| | 1e-66 | calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gb|EF |
| JMSF026M22 | Sequence | 582 | 012327 (12) | emb|CDP07667.1| | 7e-66 | unnamed protein product [Coffea canephora] | 738 | 012327 (12) | ref|XP_002880102.1| | 3e-66 | calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gb|EF |
This contig is upended
. : . : . : . : . : . :
JMSF018P04- GAAGATTC
____________________________________________________________
consensus GAAGATTC
. : . : . : . : . : . :
JMSF018P04- GTGCTCTAAATCTACAGAATATTTCTAAACATAGCAGAAAGCTTGCGAAAATATCGTAAA
____________________________________________________________
consensus GTGCTCTAAATCTACAGAATATTTCTAAACATAGCAGAAAGCTTGCGAAAATATCGTAAA
. : . : . : . : . : . :
JMSF018P04- GCAGAAGCCATTTTCGCATAAATTCCATTCTTTTTTCATCTCTCAGATCTACAAATACTG
____________________________________________________________
consensus GCAGAAGCCATTTTCGCATAAATTCCATTCTTTTTTCATCTCTCAGATCTACAAATACTG
. : . : . : . : . : . :
JMSF018P04- TTCTGGCGGCGAAGAAACAGTGTAAAAAAAATAAAAAATAAAAAATAAAAAAAAAATCAG
JMFF025N19- GTAAAAAAAATAAAAAATAAAAAATAAAAAAAAAATCAG
JMSF026M22- GTAAAAAAAATAAAAAATAAAAAATAAAAAAAAAATCAG
rJMSF026M22+ AAAAAAAAATCCG
rJMFF025N19+ AATAAAAAAAAAATCAG
rJMSF018P04+ TAAAAAAANTNAAAAATNAAAAATNAAAAAAAANTCAG
rJMFF028M24+ AAAAAAAAATCAG
____________________________________________________________
consensus TTCTGGCGGCGAAGAAACAGTGTAAAAAAAATAAAAAATAAAAAATAAAAAAAAAATCAG
. : . : . : . : . : . :
JMSF018P04- GCACAGAGAGAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
JMFF025N19- GCACAGAGAGAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
JMSF026M22- GCACAGAGAGAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
rJMSF026M22+ GCACAGAGAGAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
JMFS012H08- GAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
JMFF022I11- TGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
JMFF028M24- TGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
rJMFF025N19+ GCACAGAGAGAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
rJMSF018P04+ GCACAGAGAGAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
rJMFF023D06+ TCGTGAAC
rJMFF028M24+ GCACAGAGAGAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
____________________________________________________________
consensus GCACAGAGAGAGATGGGAGTGGTGATTATCGACGGGTCAACGGTGCGAAACTTCGTGAAC
. : . : . : . : . : . :
JMSF018P04- GACGAANAGGCCTTCAACAAGGCCGTANACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
JMFF025N19- GACGAANAGGCCTTCAACAAGGCCGTANACGANAGGTTCTCGTCGCTGGATCTCAACGAC
JMSF026M22- GACGAANAGGCCTTCAACAAGGCCGTANACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
rJMSF026M22+ GACGAAGAGGCCTTCAACAAGGCCGTAGACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
JMFS012H08- GACGAAGAGGCCTTCAACAAGGCCGTAGACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
JMFF022I11- GACGAANAGGCCTTCAACAAGGCCGTANACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
JMFF028M24- GACGAANAGGCCTTCAACAAGGCCGTANACGANAGGTTCTCGTCGCTGGATCTCAACGAC
rJMFF025N19+ GACGAAGAGGCCTTCAACAAGGCCGTAGACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
rJMSF018P04+ GACGAAGAGGCCTTCAACAAGGCCGTAGACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
rJMFF023D06+ GACGAAGAGGCCTTCAACAAGGCCGTAGACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
rJMFF028M24+ GACGAAGAGGCCTTCAACAAGGCCGTAGACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
____________________________________________________________
consensus GACGAAGAGGCCTTCAACAAGGCCGTAGACGAGAGGTTCTCGTCGCTGGATCTCAACGAC
. : . : . : . : . : . :
JMSF018P04- GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
JMFF025N19- GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
JMSF026M22- GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
rJMSF026M22+ GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
JMFS012H08- GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
JMFF022I11- GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
JMFF028M24- GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
rJMFF022I11+ GCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCNGTNTCATCGAG
rJMFF025N19+ GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
rJMSF018P04+ GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
rJMFF023D06+ GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
rJMFF028M24+ GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
____________________________________________________________
consensus GACGGCGTCCTGTCGCGCTCGGAGCTGCGGAATGCGTTCGAGTCGTTCCGTCTCATCGAG
. : . : . : . : . : . :
JMSF018P04- ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
JMFF025N19- ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
JMSF026M22- ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
rJMSF026M22+ ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
JMFS012H08- ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
JMFF022I11- ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
JMFF028M24- ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
rJMFF022I11+ ANTCNCTTCGGCGTCGACGCCNCCNNTCNGCCGGANGAGCTGCCCAAGNTCTNCGNCTCC
rJMFF025N19+ ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
rJMSF018P04+ ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
rJMFF023D06+ ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
rJMFF028M24+ ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
____________________________________________________________
consensus ACTCACTTCGGCGTCGACGCCGCCACTCCGCCGGATGAGCTGCCCAAGCTCTACGACTCC
. : . : . : . : . : . :
JMSF018P04- ATATTCGAGAAGTTCGATTTAG
JMFF025N19- ATATTCGAGAAGTTCGATTTANATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
JMSF026M22- ATATTCGAGAAGTTCGATTTAGATCANAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
rJMSF026M22+ ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
JMFS012H08- ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
JMFF022I11- ATATTCGAGAAGTTCGATTTANATCANAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
JMFF028M24- ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
rJMFF022I11+ ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGN
rJMFF025N19+ ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
rJMSF018P04+ ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
rJMFF023D06+ ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
rJMFF028M24+ ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
____________________________________________________________
consensus ATATTCGAGAAGTTCGATTTAGATCAGAGCGGCACCATCGACCGTGACGAGTTCAAGAGC
. : . : . : . : . : . :
JMFF025N19- GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCANATG
JMSF026M22- GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
rJMSF026M22+ GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
JMFS012H08- GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
JMFF022I11- GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
JMFF028M24- GAGATG
rJMFF022I11+ GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATNGTCGCCGATCCAGATG
rJMFF025N19+ GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
rJMSF018P04+ GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
rJMFF023D06+ GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
rJMFF028M24+ GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
____________________________________________________________
consensus GAGATGAAGAAGATCATGCTCGCCATAGCCGATGGATTCGGATCGTCGCCGATCCAGATG
. : . : . : . : . : . :
JMFF025N19- GNGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAG
JMSF026M22- GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAGCC
rJMSF026M22+ GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAGCC
JMFS012H08- GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAGCC
JMFF022I11- GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGA
rJMFF022I11+ GTGCTTGACGATAGCTNTGGCGATAATAACNTCCTCAAACAAGCCGCNGNCCGGGAAGCC
rJMFF025N19+ GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAGCC
rJMSF018P04+ GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAGCC
rJMFF023D06+ GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAGCC
rJMFF028M24+ GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAGCC
____________________________________________________________
consensus GTGCTTGACGATAGCTTTGGCGATAATAACTTCCTCAAACAAGCCGCCGACCGGGAAGCC
. : . : . : . : . : . :
JMSF026M22- GCCCAGTTCTCCGCCTGAACATGGAATCGAATCTGAAACGGTAAAATAACTCCGATCCGG
rJMSF026M22+ GCCCAGTTCTCCGCCTGAACATGGAATCGAATCTGAAACGGTAAAATAACTCCGATCCGG
JMFS012H08- GCCCAGTTCTCCGCCTGAACATGGAATCGAATCTGAAACGGTAAAATAACTCCGATCCGG
rJMFF022I11+ GCCCAGTTCTCCGC
rJMFF025N19+ GCCCAGTTCTCCGCCTGAACATGGAATCGAATCTGAAACGGTAAAATAACTCCGATCCGG
rJMSF018P04+ GCCCAGTTCTCCGCCTGAACATGGAATCGAATCTGAAACGGTAAAATAACTCCGATCCGG
rJMFF023D06+ GCCCAGTTCTCCGCCTGAACATGGAATCGAATCTGAAACGGTAAAATAACTCCGATCCGG
rJMFF028M24+ GCCCAGTTCTCCGCCTGAACATGGAATCGAATCTGAAACGGTAAAATAACTCCGATCCGG
____________________________________________________________
consensus GCCCAGTTCTCCGCCTGAACATGGAATCGAATCTGAAACGGTAAAATAACTCCGATCCGG
. : . : . : . : . : . :
JMSF026M22- CAGTTTATTCGGCCAATTTTCTTCTTGAAATATCGTGTTTAATAAGTTTTGGTTATCCAT
rJMSF026M22+ CAGTTTATTCGGCCAATTTTCTTCTTGAAATATCGTGTTTAATAAGTTTTGGTTATCCAT
JMFS012H08- CAGTTTATTCGGCCAATTTTCTTCTTGAAATATCGTGTTTAATAAGTTTTGGTTATCCAT
rJMFF025N19+ CAGTTTATTCGGCCAATTTTCTTCTTGAAATATCGTGTTTAATAAGTTTTGGTTATCCAT
rJMSF018P04+ CAGTTTATTCGGCCAATTTTCTTCTTGAAATATCGTGTTTAATAAGTTTTGGTTATCCAT
rJMFF023D06+ CAGTTTATTCGGCCAATTTTCTTCTTGAAATATCGTGTTTAATAAGTTTTGGTTATCCAT
rJMFF028M24+ CAGTTTATTCGGCCAATTTTCTTCTTGAAATATCGTGTTTAATAAGTTTTGGTTATCCAT
____________________________________________________________
consensus CAGTTTATTCGGCCAATTTTCTTCTTGAAATATCGTGTTTAATAAGTTTTGGTTATCCAT
. : . : . : . : . : . :
JMSF026M22- TA
rJMSF026M22+ TACTGTCACTAAGAATTATGGTGCAAGTTTGATTACAGAAACTTGTCATTCGTGGTATGT
JMFS012H08- TACTGTCACTAAGAATTATGGTGCAAGTTTGATTACAGAAACTTGTCATTCGTGGTATGT
rJMFF025N19+ TACTGTCACTAAGAATTATGGTGCAAGTTTGATTACAGAAACTTGTCATTCGTGGTATGT
rJMSF018P04+ TACTGTCACTAAGAATTATGGTGCAAGTTTGATTACAGAAACTTGTCATTCGTGGTATGT
rJMFF023D06+ TACTGTCACTAAGAATTATGGTGCAAGTTTGATTACAGAAACTTGTCATTCGTGGTATGT
rJMFF028M24+ TACTGTCACTAAGAATTATGGTGCAAGTTTGATTACAGAAACTTGTCATTCGTGGTATGT
____________________________________________________________
consensus TACTGTCACTAAGAATTATGGTGCAAGTTTGATTACAGAAACTTGTCATTCGTGGTATGT
. : . : . : . : . : . :
rJMSF026M22+ TTTAGGATCAATATTGTTGGTATGAAATTATTTCAACCAACCATAGTAGTTCAATTATTG
JMFS012H08- TTTAGGATCAATATTGTTGGTATGAAATT
rJMFF025N19+ TTTAGGATCAATATTGTTGGTATGAAATTATTTCAACCAACCATAGTAGTTCAATTATTG
rJMSF018P04+ TTTAGGATCAATATTGTTGGTATGAAATTATTTCAACCAACCATAGTAGTTCAATTATTG
rJMFF023D06+ TTTAGGATCAATATTGTTGGTATGAAATTATTTCAACCAACCATAGTAGTTCAATTATTG
rJMFF028M24+ TTTAGGATCAATATTGTTGGTATGAAATTATTTCAACCAACCATAGTAGTTCAATTATTG
____________________________________________________________
consensus TTTAGGATCAATATTGTTGGTATGAAATTATTTCAACCAACCATAGTAGTTCAATTATTG
. : . : . : . : . : . :
rJMSF026M22+ TCAATAAGAAAAGACGAGTAGGATATGAACGATGAAATTAT
rJMFF025N19+ TCAATAAGAAAAGAC
rJMSF018P04+ TCAATAAGAAAAGACGAGTAGGATATGAACGATGAAATTAT
rJMFF023D06+ TCAATAAGAAAAGACGAGTAGGATATGAACGATGAAATTAT
rJMFF028M24+ TCAATAAGAAAAGACGAGTAGGATATGAACGATGAAATTATGTGTTTGATGATAGGAAAA
____________________________________________________________
consensus TCAATAAGAAAAGACGAGTAGGATATGAACGATGAAATTATGTGTTTGATGATAGGAAAA