Contig 012323:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027I20Sequence596010016 (7)ref|XP_009625544.1|3e-83PREDICTED: probable salt tolerance-like protein At1g78600 [Nicotiana tomentosif715012323 (2)ref|XP_010324399.1|2e-30PREDICTED: B-box zinc finger protein 22 isoform X1 [Solanum lycopersicum]
JMFF034P07Sequence698012323 (2)ref|XP_010324399.1|1e-31PREDICTED: B-box zinc finger protein 22 isoform X1 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF034P07+            AGGCTGATAGTGGGAAGCTTGGAGACACTGACTGCTCCGCTACTTTGAGAGTCAATGA
rJMFF027I20+             GGCTGATAGTGGGAAGCTTGGAGACACTGACTGCTCCGCTACTTTGAGAGTCAATGA
                      ____________________________________________________________
consensus               AGGCTGATAGTGGGAAGCTTGGAGACACTGACTGCTCCGCTACTTTGAGAGTCAATGA
 
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rJMFF034P07+          GGAAGAGCTGGATGGTGATGAGTGCTTGGGTCCAGGGCTTGATGCATCCTGGGCAGTTCC
rJMFF027I20+          GGAAGAGCTGGATGGTGATGAGTGCTTGGGTCCAGGGCTTGATGCATCCTGGGCAGTTCC
                      ____________________________________________________________
consensus             GGAAGAGCTGGATGGTGATGAGTGCTTGGGTCCAGGGCTTGATGCATCCTGGGCAGTTCC
 
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rJMFF034P07+          ACAAATTCCTTCCCCGCCTACAGCCTCGGGACTTTATTGGCCTAAAACTAACCAAAATTC
rJMFF027I20+          ACAAATTCCTTCCCCGCNTACAGCCTCGGGACTTTATTGGCCTAAAACTAACCAAAATTC
                      ____________________________________________________________
consensus             ACAAATTCCTTCCCCGCCTACAGCCTCGGGACTTTATTGGCCTAAAACTAACCAAAATTC
 
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rJMFF034P07+          ATTCGATTCTGCAGTCTTTGTGCCCGACATATGCTACTCCCCCATGCAGAATTTTGACAA
rJMFF027I20+          ATTCGATTCTGCAGTCTTTGTGCCCGACATATGCTACTCCCCCATGCAGAATTTTGACAA
                      ____________________________________________________________
consensus             ATTCGATTCTGCAGTCTTTGTGCCCGACATATGCTACTCCCCCATGCAGAATTTTGACAA
 
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rJMFF034P07+          CCAACAGCCAAACAGAATGAAAAGGAGAAGACAGTACTAGTGTATTCCCCACCACACTCA
rJMFF027I20+          CCAACAGCCAAACAGAATGAAAAGGAGAAGACAGTACTAGTGTATTCCCCACCACACTCA
                      ____________________________________________________________
consensus             CCAACAGCCAAACAGAATGAAAAGGAGAAGACAGTACTAGTGTATTCCCCACCACACTCA
 
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rJMFF034P07+          TTCAAGAATAGGGAATTAGGTGTTTTTCAGAATCTCTTCTTTCTACCAAGTGTGCTTTAA
rJMFF027I20+          TTCAAGAATAGGGAATTAGGTGTTTTTCAGAATCTCTTCTTTCTACCAAGTGTGCTTTAA
                      ____________________________________________________________
consensus             TTCAAGAATAGGGAATTAGGTGTTTTTCAGAATCTCTTCTTTCTACCAAGTGTGCTTTAA
 
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rJMFF034P07+          TGGTATCAGAAAATTAGGCTTCCCACTCTTAGCTGAAGATATTCAACCATATGCTTATTC
rJMFF027I20+          TGGTATCAGAAAATTAGGCTTCCCACTCTTAGCTGAAGA--TTCAACCATATGCTTATTC
                      ____________________________________________________________
consensus             TGGTATCAGAAAATTAGGCTTCCCACTCTTAGCTGAAGATATTCAACCATATGCTTATTC
 
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rJMFF034P07+          CTGAAATTTAGCATCTTGTCTGCAAGAATCCTCTTATTCCATCAGTACTTAGGATTATCA
rJMFF027I20+          CTGAAATTTAGCATCTTGTCTGCAAGAATCCTCTTATTCCATCAGTACTTAGGATTATCA
                      ____________________________________________________________
consensus             CTGAAATTTAGCATCTTGTCTGCAAGAATCCTCTTATTCCATCAGTACTTAGGATTATCA
 
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rJMFF034P07+          AATTAAGTGGAGATCATGTTGTGTTGCAACCTCATTGTTTTTAAGTGCCATGAAGGAGAT
rJMFF027I20+          AATTAAGTGGAGATCATGTTGTGTTGCAACCTCATTGTTTTTAAGTGCCATGAAGGAGAT
                      ____________________________________________________________
consensus             AATTAAGTGGAGATCATGTTGTGTTGCAACCTCATTGTTTTTAAGTGCCATGAAGGAGAT
 
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rJMFF034P07+          TATTCTATACGGTGTTCCTGGATGTTGAAAAACACAGATCAGAGGGCTGGTTAGTTCAAG
rJMFF027I20+          TATTCTATACGGTGTTCCTGGATGTTGAAAAACACAGATCAGAGGGCTGGTTAGTTCATG
                      ____________________________________________________________
consensus             TATTCTATACGGTGTTCCTGGATGTTGAAAAACACAGATCAGAGGGCTGGTTAGTTCATG
 
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rJMFF034P07+          TAGAGCATGTTCCAAGTCCTTTGTGCACCTCATATCTGTTGCAGGAAATTATTCAAAGAT
rJMFF027I20+          TAGAGCATGTTCCAAGTCCTTTGTGCACCTCATATCTGTTGCAGGAAATTATTCAAAGAT
                      ____________________________________________________________
consensus             TAGAGCATGTTCCAAGTCCTTTGTGCACCTCATATCTGTTGCAGGAAATTATTCAAAGAT
 
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rJMFF034P07+          TGTACAAAGCTAGAGCAGCAGACAATT                                 
rJMFF027I20+          TGTACAAAGCTAGAGCAGCAGACAATTTCTTAATGGCTAACATGTATAATGTGGTTTTTC
                      ____________________________________________________________
consensus             TGTACAAAGCTAGAGCAGCAGACAATTTCTTAATGGCTAACATGTATAATGTGGTTTTTC