| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016L06 | Sequence | 576 | 011519 (5) | gb|KDO79974.1| | 2e-88 | hypothetical protein CISIN_1g008569mg [Citrus sinensis] | 763 | 012318 (4) | ref|XP_009594923.1| | 3e-59 | PREDICTED: clathrin interactor EPSIN 1-like [Nicotiana tomentosiformis] ref|XP_0 |
| JMFF026C11 | Sequence | 539 | 011519 (5) | gb|KDO79974.1| | 1e-81 | hypothetical protein CISIN_1g008569mg [Citrus sinensis] | 646 | 012318 (4) | ref|XP_009594923.1| | 6e-34 | PREDICTED: clathrin interactor EPSIN 1-like [Nicotiana tomentosiformis] ref|XP_0 |
| JMSF040O24 | Sequence | 681 | 011519 (5) | gb|KDO79974.1| | 2e-109 | hypothetical protein CISIN_1g008569mg [Citrus sinensis] | 805 | 012318 (4) | ref|XP_009594923.1| | 1e-59 | PREDICTED: clathrin interactor EPSIN 1-like [Nicotiana tomentosiformis] ref|XP_0 |
| JMSF052L16 | Sequence | 668 | 011519 (5) | gb|KDO79974.1| | 2e-109 | hypothetical protein CISIN_1g008569mg [Citrus sinensis] | 908 | 012318 (4) | ref|XP_009594923.1| | 1e-61 | PREDICTED: clathrin interactor EPSIN 1-like [Nicotiana tomentosiformis] ref|XP_0 |
This contig is upended
. : . : . : . : . : . :
rJMSF052L16+ CGCTCGGAAGTTGATTTATTTTGCTGATGCAGATTTTGTATCTGCTACCCCCAGTCTAA
____________________________________________________________
consensus CGCTCGGAAGTTGATTTATTTTGCTGATGCAGATTTTGTATCTGCTACCCCCAGTCTAA
. : . : . : . : . : . :
rJMSF040O24+ GGGGGAAGCTCTCAGTCTCAGACGAGTGGTTGATCTGTTCGCCCAACCTGAAGTAG
rJMSF052L16+ AATGGGGGGAAGCTCTCAGTCTCAGACGAGT-GTTGATCTGTTCGCCCAACCTGAAGTAG
____________________________________________________________
consensus AATGGGGGGAAGCTCTCAGTCTCAGACGAGTGGTTGATCTGTTCGCCCAACCTGAAGTAG
. : . : . : . : . : . :
rJMSF040O24+ GGGGAAGCTCTCAACCTCAGACTGGTATTGATCTGTTCTCACAACCTGCACCTTTGCCTG
rJMSF052L16+ GGGGAAGCTCTCAACCTCAGACTGGTATTGATCTGTTCTCACAACCTGCACCTTTGCCTG
____________________________________________________________
consensus GGGGAAGCTCTCAACCTCAGACTGGTATTGATCTGTTCTCACAACCTGCACCTTTGCCTG
. : . : . : . : . : . :
rJMSF040O24+ CCCCTCCTTCAGCAATGCCCATGCCTCAGTCATCATCCATTGATTTTTTTTCAGTACCTG
rJMSF052L16+ CCCCTCCTTCAGCAATGCCCATGCCTCAGTCATCATCCATTGATTTTTTTTCAGTACCTG
rJMFF016L06+ TTCAGCAATGCCCATGCCTCAGTCATCATCCATTGATTTTTTTTCAGTACCTG
____________________________________________________________
consensus CCCCTCCTTCAGCAATGCCCATGCCTCAGTCATCATCCATTGATTTTTTTTCAGTACCTG
. : . : . : . : . : . :
rJMSF040O24+ ATCCAGCTGTGAAATCTTCAAAACAAGAGCCCATGAATACTAATATAGTTGATCCCTTTG
rJMSF052L16+ ATCCAGCTGTGAAATCTTCAAAACAAGAGCCCATGAATACTAATATAGTTGATCCCTTTG
rJMFF016L06+ ATCCAGCTGTGAAATCTTCAAAACAAGAGCCCATGAATACTAATATAGTTGATCCCTTTG
____________________________________________________________
consensus ATCCAGCTGTGAAATCTTCAAAACAAGAGCCCATGAATACTAATATAGTTGATCCCTTTG
. : . : . : . : . : . :
rJMSF040O24+ CTGCAGTTCCATTAAATACATTTGATAGTTCTGACCCATTTGGCTCATTTGTTTCCCAAA
rJMSF052L16+ CTGCAGTTCCATTAAATACATTTGATAGTTCTGACCCATTTGGCTCATTTGTTTCCCAAA
rJMFF016L06+ CTGCAGTTCCATTAAATACATTTGATAGTTCTGACCCATTTGGCTCATTTGTTTCCCAAA
____________________________________________________________
consensus CTGCAGTTCCATTAAATACATTTGATAGTTCTGACCCATTTGGCTCATTTGTTTCCCAAA
. : . : . : . : . : . :
rJMSF040O24+ CTGATCCTCCTGTATCTGCAACGCCCAATGAGACTGCTACCAGTGGTCTAAATCAAGGAA
rJMSF052L16+ CTGATCCTCCTGTATCTGCAACGCCCAATGAGACTGCTACCAGTGGTCTAAATCAAGGAA
rJMFF016L06+ CTGATCCTCCTGTATCTGCAACGCCCAATGAGACTGCTACCAGTGGTCTAAATCAAGGAA
____________________________________________________________
consensus CTGATCCTCCTGTATCTGCAACGCCCAATGAGACTGCTACCAGTGGTCTAAATCAAGGAA
. : . : . : . : . : . :
rJMSF040O24+ ACTTAAACAATTCTTCGGTAGAATCCAAACCCCCA-CCCAAGAAGGATGCTTTTCAGGTC
rJMSF052L16+ ACTTAAACAATTCTTCGGTAGAATCCAAACCCCCA-CCCAAGAAGGATGCTTTTCAGGTC
rJMFF016L06+ ACTTAAACAATTCTTCGGTAGAATCCAAACCCCCA-CCCAAGAAGGATGCTTTTCAGGTC
rJMFF026C11+ TCGGTAGAATCCAAACCCCCACCCCAAGAAGGATGCTTTTCAGGTC
____________________________________________________________
consensus ACTTAAACAATTCTTCGGTAGAATCCAAACCCCCA-CCCAAGAAGGATGCTTTTCAGGTC
. : . : . : . : . : . :
rJMSF040O24+ AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
rJMSF052L16+ AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
rJMFF016L06+ AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
rJMFF026C11+ AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
____________________________________________________________
consensus AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
. : . : . : . : . : . :
rJMSF040O24+ CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
rJMSF052L16+ CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
rJMFF016L06+ CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
rJMFF026C11+ CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
____________________________________________________________
consensus CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
. : . : . : . : . : . :
rJMSF040O24+ GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
rJMSF052L16+ GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
rJMFF016L06+ GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
rJMFF026C11+ GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
____________________________________________________________
consensus GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
. : . : . : . : . : . :
rJMSF040O24+ GGGTCTGGGCTAGGAGAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
rJMSF052L16+ GGGTCTGGGCTAGGAAAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
rJMFF016L06+ GGGTCTGGGCTAGGAAAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
rJMFF026C11+ GGGTCTGGGCTAGGAAAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
____________________________________________________________
consensus GGGTCTGGGCTAGGAAAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
. : . : . : . : . : . :
rJMSF040O24+ TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
rJMSF052L16+ TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
rJMFF016L06+ TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
rJMFF026C11+ TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
____________________________________________________________
consensus TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
. : . : . : . : . : . :
rJMSF040O24+ AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
rJMSF052L16+ AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
rJMFF016L06+ AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
rJMFF026C11+ AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
____________________________________________________________
consensus AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
. : . : . : . : . : . :
rJMSF040O24+ AGATCAAATGTTTATTTGTGTGTGCGATCT
rJMSF052L16+ AGATCAAATGTTTATTTGTGTGTGCGATCTCTTCTTTTTGCGATTGTTTAAAAGTGTGCA
rJMFF016L06+ AGATCAAATGTTTATTTGTGTGTGCGATCTCTTCTTTTTGCGATTGTTTAAAAGTGTGCA
rJMFF026C11+ AGATCAAATGTTTATTTGTGTGTGCGATCTCTTCTTTTTGCGATTGTTTAAAAGTGTGCA
____________________________________________________________
consensus AGATCAAATGTTTATTTGTGTGTGCGATCTCTTCTTTTTGCGATTGTTTAAAAGTGTGCA
. : . : . : . : . : . :
rJMSF052L16+ TTGGTAATGCA
rJMFF016L06+ TTGGTAATGCAGTTTTCAGAAACAGGATCAGTAGTTTGAATTTCTCAT
rJMFF026C11+ TTGGTAATGCAGTTTTCAGAAACAGGATCAGTAGTTTGAATTTCTCATTTTTATGTGCTG
____________________________________________________________
consensus TTGGTAATGCAGTTTTCAGAAACAGGATCAGTAGTTTGAATTTCTCATTTTTATGTGCTG
. : . : . : . : . : . :
rJMFF026C11+ CCTGCTCATTTGAAACAGATTTATATGCCCTTCAAAATAGGACCAAGGAATTGTAAAGAA
____________________________________________________________
consensus CCTGCTCATTTGAAACAGATTTATATGCCCTTCAAAATAGGACCAAGGAATTGTAAAGAA
. : . : . : . : . : . :
rJMFF026C11+ AAAACAGTGAAGCCCCTTTTGAGTGTGATACAAGTTGCAGGAAAAAAGGAAACAAGAGAG
____________________________________________________________
consensus AAAACAGTGAAGCCCCTTTTGAGTGTGATACAAGTTGCAGGAAAAAAGGAAACAAGAGAG