Contig 012317:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF033B14+                                                              CCCGCGGA
                      ____________________________________________________________
consensus                                                                 CCCGCGGA
 
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rJMFF033B14+          GACAGTAGGTGCAGCTCCCTCNGNAAATGTGAACGGAGGCGGGCCTACAGTGGGTGGGCC
rJMFF026A24+                                            GGAGGCGGGCCTACAGTGGGTGGGCC
                      ____________________________________________________________
consensus             GACAGTAGGTGCAGCTCCCTCNGNAAATGTGAACGGAGGCGGGCCTACAGTGGGTGGGCC
 
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rJMFF033B14+          CGTGGGTTCATCAAGTTGCAACACGTGGCAAATGGGCGGTGGTCTCGTCGACGGCACCCT
rJMFF026A24+          CGTGGGTTCATCAAGTTGCAACACGTGGCAAATGGGCGGTGGTCTCGTNGACGGCACCCT
                      ____________________________________________________________
consensus             CGTGGGTTCATCAAGTTGCAACACGTGGCAAATGGGCGGTGGTCTCGTCGACGGCACCCT
 
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rJMFF033B14+          CGGTGACGGCGGAGATTATTTCGGCTGGCCGGACCTCGCAATATCGGCGCCGGGCAGAAG
rJMFF026A24+          CGGTGACGGCGGAGATTATTTCGGCTGGCCGGACCTCGCAATATCGGCGCCGGGCAGAAG
                      ____________________________________________________________
consensus             CGGTGACGGCGGAGATTATTTCGGCTGGCCGGACCTCGCAATATCGGCGCCGGGCAGAAG
 
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rJMFF033B14+          ATCTTGAATATTGTACGCGGTAAACAAAAACAAGTTCGCTTCTGTTTCTTAGTAGTTTAG
rJMFF026A24+          ATCTTGAATATTGTACGCGGTAAACAAAAACAAGTTCGCTTCTGTTTCTTAGTAGTTTAG
                      ____________________________________________________________
consensus             ATCTTGAATATTGTACGCGGTAAACAAAAACAAGTTCGCTTCTGTTTCTTAGTAGTTTAG
 
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rJMFF033B14+          TATAACAGGAATTTGAACTCTAAAAACTCCGACTTCTGTTAATCATGTTTTGGTTCTTGT
rJMFF026A24+          TATAACAGGAATTTGAACTCTAAAAACTCCGACTTCTGTTAATCATGTTTTGGTTCTTGT
                      ____________________________________________________________
consensus             TATAACAGGAATTTGAACTCTAAAAACTCCGACTTCTGTTAATCATGTTTTGGTTCTTGT
 
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rJMFF033B14+          TTCTTTATTATTATTATTAATTATCATTAGTCCTGGTAANTAAGGTACCGCTACCTAAAA
rJMFF026A24+          TTCTTTATTATTATTATTAATTATCATTAGTCCTGGTAATTAAGGTACCGCTACCTAAAA
                      ____________________________________________________________
consensus             TTCTTTATTATTATTATTAATTATCATTAGTCCTGGTAATTAAGGTACCGCTACCTAAAA
 
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rJMFF033B14+          CTATTTCATCGATTACTTGTGCTGGATTTCGGATTGGTGTGACTGTAGATTTATTTTTCC
rJMFF026A24+          CTATTTCATCGATTACTTGTGCTGGATTTCGGATTGGTGTGACTGTAGATTTATTTTTCC
                      ____________________________________________________________
consensus             CTATTTCATCGATTACTTGTGCTGGATTTCGGATTGGTGTGACTGTAGATTTATTTTTCC
 
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rJMFF033B14+          CTTGTTATTTTACAGGAGCTTTTGTTAATGTAAATGCTTAAAAAAATCATATCTTTTTGA
rJMFF026A24+          CTTGTTATTTTACAGGAGCTTTTGTTAATGTAAATGCTTAAAAAAATCATATCTTTTTGA
                      ____________________________________________________________
consensus             CTTGTTATTTTACAGGAGCTTTTGTTAATGTAAATGCTTAAAAAAATCATATCTTTTTGA
 
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rJMFF033B14+          CGAGTNTAAGATGAAAAAAGAATNTGGTTCTTGGCTNGTTTTATATAACTATTGTCTTCC
rJMFF026A24+          CGAGTNTAAGATGAAAAAAGAATNTGGTTCTTGGCTTGTTTTATATAACTATTGTCTTCC
                      ____________________________________________________________
consensus             CGAGTNTAAGATGAAAAAAGAATNTGGTTCTTGGCTTGTTTTATATAACTATTGTCTTCC
 
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rJMFF033B14+          CAACATGTTCATATNTAGTTATCTTNTACTTTCGGTTACACGGTGGGGGAGCTNTGGGCA
rJMFF026A24+          CAACATGTTCATATCTAGTTATCTTNTACTTTCGGTTACACGGTGGGGGAGCTTTGGGCA
                      ____________________________________________________________
consensus             CAACATGTTCATATCTAGTTATCTTNTACTTTCGGTTACACGGTGGGGGAGCTTTGGGCA
 
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rJMFF033B14+          TATTTTTAGTTGACAGTGATGCCTTNTCATTGCTACATCNTGGAAACTTCCGANGAGAAC
rJMFF026A24+          TATTTTTAGTTGACAGTGATGCCTTNTCATTGCTACATCNTGGAAACTTCCGATGAGAAC
                      ____________________________________________________________
consensus             TATTTTTAGTTGACAGTGATGCCTTNTCATTGCTACATCNTGGAAACTTCCGATGAGAAC
 
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rJMFF033B14+          GTGTGGGGGCCTAGAAACCAAGAGAGTGCAACG                           
rJMFF026A24+          GTGTGGGGGCCTAGAAACCAAGAGAGTGCAACGTTGTATTTTATGTGTTTATAGTACAAT
                      ____________________________________________________________
consensus             GTGTGGGGGCCTAGAAACCAAGAGAGTGCAACGTTGTATTTTATGTGTTTATAGTACAAT