clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF003C20 | Sequence | 593 | 012810 (5) | gb|KDO85584.1| | 2e-52 | hypothetical protein CISIN_1g014800mg [Citrus sinensis] | 715 | 012316 (5) | ref|XP_002275918.1| | 3e-54 | PREDICTED: dnaJ protein homolog 2 [Vitis vinifera] |
JMFF008B06 | Sequence | 781 | 012316 (5) | emb|CDP09461.1| | 4e-104 | unnamed protein product [Coffea canephora] | |||||
JMFF025P20 | Sequence | 444 | 012810 (5) | gb|KDO85584.1| | 2e-53 | hypothetical protein CISIN_1g014800mg [Citrus sinensis] | 818 | 012316 (5) | emb|CDP09461.1| | 2e-83 | unnamed protein product [Coffea canephora] |
JMFF047O06 | Sequence | 435 | 012810 (5) | gb|KDO85584.1| | 2e-53 | hypothetical protein CISIN_1g014800mg [Citrus sinensis] | 284 | 012316 (5) | |||
JMSF048J17 | Sequence | 700 | 012810 (5) | gb|KDO85584.1| | 3e-79 | hypothetical protein CISIN_1g014800mg [Citrus sinensis] | 759 | 012316 (5) | emb|CDP09461.1| | 1e-101 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF008B06+ CCT
____________________________________________________________
consensus CCT
. : . : . : . : . : . :
rJMSF048J17+ AGGATCAGGTGAGGCCATAAGTGAAAGAGACAAATGTACACAGTGCAAAGGA
rJMFF008B06+ GATTGCCGAGGATCAGGTGAGGCCATAAGTGAAAGAGACAAATGTACNCAGTGCAAAGGA
____________________________________________________________
consensus GATTGCCGAGGATCAGGTGAGGCCATAAGTGAAAGAGACAAATGTACACAGTGCAAAGGA
. : . : . : . : . : . :
rJMSF048J17+ AGCAAGGTTACCCAAGAAAAGAAAGTGCTGGAAGTGAATGTCGAGAAGGGGATGCAAAAT
rJMFF008B06+ AGCAAGGTTACCCAAGAAAAGAAAGTGCTGGAAGTGAATGTCGAGAAGGGGATGCAAAAT
rJMFF025P20+ AAGTGCTGNAAGTGAATGTCGAGAAGGGGATGCAAAAT
____________________________________________________________
consensus AGCAAGGTTACCCAAGAAAAGAAAGTGCTGGAAGTGAATGTCGAGAAGGGGATGCAAAAT
. : . : . : . : . : . :
rJMSF048J17+ GGTGAAAAGATAGTATTTACTGGGGAAGCAGATGAGGCACCCGATACCATTGCTGGGGAT
rJMFF008B06+ GGTGAAAAGATAGTATTTACTGGGGAAGCAGATGAGGCACCCGATACCATTGCTGGGGAT
rJMFF003C20+ TTGCTGGGGAT
rJMFF025P20+ GGTGAAAAGATAGTATTTACTGGGGAAGCAGATGAGGCACCCGATACCATTGCTGGGGAT
____________________________________________________________
consensus GGTGAAAAGATAGTATTTACTGGGGAAGCAGATGAGGCACCCGATACCATTGCTGGGGAT
. : . : . : . : . : . :
rJMSF048J17+ ATTGTTTTCGTGGTACAGCAGAGGGAACACCCCAAGTTCAAGCGGAAGTTCGATGATCTC
rJMFF008B06+ ATTGTTTTCGTGGTACAGCAGAGGGAACACCCCAAGTTCAAGCGGAAGTTCGATGATCTC
rJMFF003C20+ ATTGTTTTCGTGGTACAGCAGAGGGAACACCCCAAGTTCAAGCGGAAGTTCGATGATCTC
rJMFF025P20+ ATTGTTTTCGTGGTACAGCAGAGGGAACACCCCAAGTTCAAGCGGAAGTTCGATGATCTC
____________________________________________________________
consensus ATTGTTTTCGTGGTACAGCAGAGGGAACACCCCAAGTTCAAGCGGAAGTTCGATGATCTC
. : . : . : . : . : . :
rJMSF048J17+ TATATGGAGCACACCCTCAGTTTAACCGAAGCTCTTTGTGGCTTTCAGTTCGTCATAACT
rJMFF008B06+ TATATGGAGCACACCCTCAGTTTAACCGAAGCTCTTTGTGGCTTTCAGTTCGTCATAACT
rJMFF003C20+ TATATGGAGCACACCCTCAGTTTAACCGAAGCTCTTTGTGGCTTTCAGTTCGTCATAACT
rJMFF025P20+ TATATGGAGCACACCCTCAGTTTAACCGAAGCTCTTTGTGGCTTTCAGTTCGTCATAACT
____________________________________________________________
consensus TATATGGAGCACACCCTCAGTTTAACCGAAGCTCTTTGTGGCTTTCAGTTCGTCATAACT
. : . : . : . : . : . :
rJMSF048J17+ CATCTCGATGGCAGGCAGCTTCTAATCAAATCAGGACCCGGCGAAGTTATTAAGCCCGAT
rJMFF008B06+ CATCTCGATGGCAGGCAGCTTCTAATCAAATCAGGACCCGGCGAAGTTATTAAGCCCGAT
rJMFF003C20+ CATCTCGATGGCAGGCAGCTTCTAATCAAATCAGGACCCGGCGAAGTTATTAAGCCCGAT
rJMFF025P20+ CATCTCGATGGCAGGCAGCTTCTAATCAAATCAGGACCCGGCGAAGTTATTAAGCCCGAT
____________________________________________________________
consensus CATCTCGATGGCAGGCAGCTTCTAATCAAATCAGGACCCGGCGAAGTTATTAAGCCCGAT
. : . : . : . : . : . :
rJMSF048J17+ CAATCCAAGGCAATAAACGACGAGGGAATGCCACACCACGAAAGGCCGTTCATGAAGGGC
rJMFF008B06+ CAATCCAAGGCAATAAACGACGAGGGAATGCCACACCACGAAAGGCCGTTCATGAAGGGC
rJMFF003C20+ CAATCCAAGGCAATAAACGACGAGGGAATGCCACACCACGAAAGGCCGTTCATGAAGGGC
rJMFF025P20+ CAATCCAAGGCAATAAACGACGAGGGAATGCCACACCACGAAAGGCCGTTCATGAAGGGC
____________________________________________________________
consensus CAATCCAAGGCAATAAACGACGAGGGAATGCCACACCACGAAAGGCCGTTCATGAAGGGC
. : . : . : . : . : . :
rJMSF048J17+ CGCTTGTACATCAATTTTGACGTGGAATTTCCCGAGCCCGGGGCTCTTTCCCCCGAGGCA
rJMFF008B06+ CGCTTGTACATCAATTTTGACGTGGAATTTCCCGAGCCCGGGGCTCTTTCCCCCGAGGCA
rJMFF003C20+ CGCTTGTACATCAATTTTGACGTGGAATTTCCCGAGCCCGGGGCTCTTTCCCCCGAGGCA
rJMFF025P20+ CGCTTGTACATCAATTTTGACGTGGAATTTCCCGAGCCCGGGGCTCTTTCCCCCGAGGCA
____________________________________________________________
consensus CGCTTGTACATCAATTTTGACGTGGAATTTCCCGAGCCCGGGGCTCTTTCCCCCGAGGCA
. : . : . : . : . : . :
rJMSF048J17+ TGCCGCGCCCTGGAGACTCTCCTGCCACCGAAACCGAGTCCGTCCTCGTTACCCGTCAAC
rJMFF008B06+ TGCCGCGCCCTGGAGACTCTCCTGCCACCGAAACCGAGTCCGTCCTCGTTACCCGTCAAC
rJMFF047O06+ AGTCCGTCCTCGTTACCCGTCAAC
rJMFF003C20+ TGCCGCGCCC-GGAGACTCTCCTGCCACCGAAACCGAGTCCGTCCTCGTTACCCGTCAAC
rJMFF025P20+ TGCCGCGCCCTGGAGACTCTCCTGCCACCGAAACCGAGTCCGTCCTCGTTACCCGTCAAC
____________________________________________________________
consensus TGCCGCGCCCTGGAGACTCTCCTGCCACCGAAACCGAGTCCGTCCTCGTTACCCGTCAAC
. : . : . : . : . : . :
rJMSF048J17+ CTCGATGAGTGCGAGGAAACGACGTTGCAGGACGTGAACATCGAGGAAGAAATGAGGCGC
rJMFF008B06+ CTCGATGAGTGCGAGGAAACGACGTTGCAGGACGTGAACATCGAGGAAGAAATGAGGCGC
rJMFF047O06+ CTCGATGAGTGCGAGGAAACGACGTTGCAGGACGTGAACATCGAGGAAGAAATGAGGCGC
rJMFF003C20+ CTCGATGAGTGCGAGGAAACGACGTTGCAGGACGTGAACATCGAGGAAGAAATGAGGCGC
rJMFF025P20+ CTCGATGAGTGCGAGGAAACGACGTTGCAGGACGTGAACATCGAGGAAGAAATGAGGCGC
____________________________________________________________
consensus CTCGATGAGTGCGAGGAAACGACGTTGCAGGACGTGAACATCGAGGAAGAAATGAGGCGC
. : . : . : . : . : . :
rJMSF048J17+ AAGGAGCAGCAGAGGCAACAAGAGGCTTACGATTCGGATGACGATTCGTCTTCAGATGTG
rJMFF008B06+ AAGGAGCAGCAGAGGCAACAAGAGGCTTACGATTCGGATGACGATTCGTCTTCAGATGTG
rJMFF047O06+ AAGGAGCAGCAGAGGCAACAAGAGGCTTACGATTCGGATGACGATTCGTCTTCAGATGTG
rJMFF003C20+ AAGGAGCAGCAGAGGCAACAAGAGGCTTACGATTCGGATGACGATTCGTCTTCAGATGTG
rJMFF025P20+ AAGGAGCAGCAGAGGCAACAAGAGGCTTACGATTCGGATGACGATTCGTCTTCAGATGTG
____________________________________________________________
consensus AAGGAGCAGCAGAGGCAACAAGAGGCTTACGATTCGGATGACGATTCGTCTTCAGATGTG
. : . : . : . : . : . :
rJMSF048J17+ CACCGCGTGGCATGCAACCAGCAGTAGTAAGGCGGCTCGGAGTCTGCCGATTTGCATATC
rJMFF008B06+ CACCGCGTGGCATGCAACCAGCAGTAGTAAGGCGGCTCGGAGTCTGCCGATTTGCATATC
rJMFF047O06+ CACCGCGTGGCATGCAACCAGCAGTAGTAAGGCGGCTCGGAGTCTGCCGATTTGCATATC
rJMFF003C20+ CACCGCGTGGCATGCAACCAGCAGTAGTAAGGCGGCTCGGAGTCTGCCGATTTGCATATC
rJMFF025P20+ CACCGCGTGGCATGCAACCAGCAGTAGTAAGGCGGCTCGGAGTCTGCCGATTTGCATATC
____________________________________________________________
consensus CACCGCGTGGCATGCAACCAGCAGTAGTAAGGCGGCTCGGAGTCTGCCGATTTGCATATC
. : . : . : . : . : . :
rJMSF048J17+ TAGCCTAGTGTATTTTTGTTATGGTCATTTGGGATATGTATAAGTAT
rJMFF008B06+ TAGCCTAGTGTATTTTTGTTATGGTCATTTGGGATATGTATAAGTATTATTATTGCTT
rJMFF047O06+ TAGCCTAGGGTATTTTTGTTATGGTCATTTGGGATATGTATAAGTATTATTATTGCTTTT
rJMFF003C20+ TAGCCTAGTGTATTTTTGTTATGGTCATTTGGGATATGTATAAGTATTATTATTGCTTTT
rJMFF025P20+ TAGCCTAGTGTATTTTTGTTATGGTCATTTGGGATATGTATAAGTATTATTATTGCTTTT
____________________________________________________________
consensus TAGCCTAGTGTATTTTTGTTATGGTCATTTGGGATATGTATAAGTATTATTATTGCTTTT
. : . : . : . : . : . :
rJMFF047O06+ TCATTTGCATTTTGAAGTTT
rJMFF003C20+ TCATTTGCATTTTGAAGTTTATCACTACTACGAGGTTTTTTATTTGTATTTTTTGCCTGA
rJMFF025P20+ TCATTTGCATTTTGAAGTTTATCACTACTACGAGGTTTTTTATTTGTATTTTTTGCCTGA
____________________________________________________________
consensus TCATTTGCATTTTGAAGTTTATCACTACTACGAGGTTTTTTATTTGTATTTTTTGCCTGA
. : . : . : . : . : . :
rJMFF003C20+ NTGCGTGAGNTATCTCATACCATTCTTAACTCTATTGTATGCAA
rJMFF025P20+ TTGCGTGAGTTATCTCATACCATTCTTAACTCTATTGTATGCAATGTTAAGGAGGAAAAG
____________________________________________________________
consensus TTGCGTGAGTTATCTCATACCATTCTTAACTCTATTGTATGCAATGTTAAGGAGGAAAAG