Contig 012310:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015E22Sequence475001685 (2)ref|XP_010104837.1|3e-29Putative glycerol-3-phosphate transporter 4 [Morus notabilis] gb|EXC02073.1| Put587012310 (2)ref|XP_009772121.1|7e-24PREDICTED: putative glycerol-3-phosphate transporter 4 [Nicotiana sylvestris]
JMFF024O16Sequence439001685 (2)ref|XP_009772121.1|1e-20PREDICTED: putative glycerol-3-phosphate transporter 4 [Nicotiana sylvestris]731012310 (2)ref|XP_009772121.1|5e-51PREDICTED: putative glycerol-3-phosphate transporter 4 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF024O16+                                                         TCCGAGACCTTTA
                      ____________________________________________________________
consensus                                                            TCCGAGACCTTTA
 
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rJMFF024O16+          ACATTTGCCTCATGTTTTTGTCGGGATTGTGTGTGAACGGACCGTACGCGCTTATTACTA
                      ____________________________________________________________
consensus             ACATTTGCCTCATGTTTTTGTCGGGATTGTGTGTGAACGGACCGTACGCGCTTATTACTA
 
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rJMFF015E22+                  TCCGCAGATCTCGGTACTCACAAATCTNTGAGGGGAGATTCCCGAGCACTAG
rJMFF024O16+          CTGCGGTCTCCGCAGATCTCGGTACTCACAAATCTCTGAGGGGAGATTCCCGAGCACTAG
                      ____________________________________________________________
consensus             CTGCGGTCTCCGCAGATCTCGGTACTCACAAATCTCTGAGGGGAGATTCCCGAGCACTAG
 
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rJMFF015E22+          CTTACGGTGACTGCAATCATTGACGGAACTGGATCGCTTGGTGCAGCACTTGGTCCGCTT
rJMFF024O16+          C-TACGGTGACTGCAATCATTGACGGAACTGGATCGCTTGGTGCAGCACTTGGTCCGCTT
                      ____________________________________________________________
consensus             CTTACGGTGACTGCAATCATTGACGGAACTGGATCGCTTGGTGCAGCACTTGGTCCGCTT
 
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rJMFF015E22+          TTGACGGGTTTTCCTCTCCACAAAAGGATGGGATGCCGTTTTTATAATGCTTTCAATCGG
rJMFF024O16+          TTGACGGG-TTTCCTCTCCACAAAAGGATGGGATGCCGTTTTTATAATGCTTTCAATCGG
                      ____________________________________________________________
consensus             TTGACGGGTTTTCCTCTCCACAAAAGGATGGGATGCCGTTTTTATAATGCTTTCAATCGG
 
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rJMFF015E22+          GGCTCTGTGTGCTGTGCTTTTGTTATCCAATTTGGTTGTTACCGAACTCCGAGGGAACAA
rJMFF024O16+          GGCTCTGTGTGCTGTGCTTTTGTTATCCAATTTGGTTGTTACCGAACTCCGAGGGAACAA
                      ____________________________________________________________
consensus             GGCTCTGTGTGCTGTGCTTTTGTTATCCAATTTGGTTGTTACCGAACTCCGAGGGAACAA
 
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rJMFF015E22+          TTCCAAACACCGGCCTAACGTGGAACACAATTCTGGAGGTTCTGCATCTCAACCACTTTT
rJMFF024O16+          TTCCAAACACCGGCCTAACGTGGAACACAATTCTGGAGGTTCTGCATCTCAACCACTTTT
                      ____________________________________________________________
consensus             TTCCAAACACCGGCCTAACGTGGAACACAATTCTGGAGGTTCTGCATCTCAACCACTTTT
 
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rJMFF015E22+          ACGTGAAGAAAGATAGAGATATCGGGATTTGGTGCTGTTCACCATGGCAAAGCAGTTCTA
rJMFF024O16+          ACGTGAAGAAAGATAGAGATATCGGGATTTGGTGCTGTTCACCATGGCAAAGCAGTTCTA
                      ____________________________________________________________
consensus             ACGTGAAGAAAGATAGAGATATCGGGATTTGGTGCTGTTCACCATGGCAAAGCAGTTCTA
 
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rJMFF015E22+          GCCCGAAGAACAAGAAGTTTCTCTAAACATCATCAGACTGAAATGTGGTCGGAGAATTTT
rJMFF024O16+          GCCCGAAGAACAAGAAGTTTCTCTAAACATCATCAGACTGAAATGTGGTCGGAGAATTTT
                      ____________________________________________________________
consensus             GCCCGAAGAACAAGAAGTTTCTCTAAACATCATCAGACTGAAATGTGGTCGGAGAATTTT
 
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rJMFF015E22+          GGTCATCTACAGACTCTTTTGGTTAGTTTTCTGGTCGGTCTTTTGTAATGTATATATAGA
rJMFF024O16+          GGTCATCTACAGACTCTTTTGGTTAGTTTTCTGGTCGGTCTTTTGTAATGTATATATAGA
                      ____________________________________________________________
consensus             GGTCATCTACAGACTCTTTTGGTTAGTTTTCTGGTCGGTCTTTTGTAATGTATATATAGA
 
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rJMFF015E22+          TATATACATATAGTCTATGTTCATTCCTAGGTCTGCAATGAAGTTGATGGTGAAGACAGA
rJMFF024O16+          TATATACATATAGTCTATGTTCATTCCTAGGTCTGCAATGAAGTTGATGGTGAAGACAGA
                      ____________________________________________________________
consensus             TATATACATATAGTCTATGTTCATTCCTAGGTCTGCAATGAAGTTGATGGTGAAGACAGA
 
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rJMFF015E22+          GTTTGTGGTAGACACAAGGCTTAATGGTTTTGTGATAGATCACTCAATCAGCAAA     
rJMFF024O16+          GTTTGTGGTAGACACAAGGCTTAATGGTTTTGTGATAGATCACTCAATCAGCAAATGTTG
                      ____________________________________________________________
consensus             GTTTGTGGTAGACACAAGGCTTAATGGTTTTGTGATAGATCACTCAATCAGCAAATGTTG
 
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rJMFF024O16+          CCTGTATTTTGTTCCATAAATTTTGTGATATATTATAAATGTTACACCTATTATATAGTA
                      ____________________________________________________________
consensus             CCTGTATTTTGTTCCATAAATTTTGTGATATATTATAAATGTTACACCTATTATATAGTA