Contig 012309:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024L18Sequence831012309 (4)emb|CDO98669.1|2e-142unnamed protein product [Coffea canephora]
JMSF008B04Sequence302010791 (3)715012309 (4)emb|CDO98669.1|1e-118unnamed protein product [Coffea canephora]
JMSF034C19Sequence657010791 (3)ref|XP_011099660.1|2e-81PREDICTED: alcohol dehydrogenase 1B [Sesamum indicum]665012309 (4)emb|CDO98669.1|9e-106unnamed protein product [Coffea canephora]
JMSF051G08Sequence693010791 (3)ref|XP_011099660.1|4e-103PREDICTED: alcohol dehydrogenase 1B [Sesamum indicum]783012309 (4)emb|CDO98669.1|2e-144unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF051G08+                  CGCAGCAATGGGAAACCAGCATATATGTATAGCATGGGAGGTCTAGCGGAAT
rJMFF024L18+                   GCAGCAATGGGAANCCAGCATATATGTATAGCATGGGAGGTCTAGCGGAAT
                      ____________________________________________________________
consensus                     CGCAGCAATGGGAAACCAGCATATATGTATAGCATGGGAGGTCTAGCGGAAT
 
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rJMSF051G08+          ACTGTGTGGTGCCAGCTCATGGATTGGCTGTTCTACCTAATTCGTTACCTTATACAGAAT
rJMSF008B04+                                                        ACCTTATACAGAAT
rJMFF024L18+          ACTGTGTGGTGCCAGCTCATGGATTGGCTGTTCTACCTAATTCGTTACCTTATACAGAAT
                      ____________________________________________________________
consensus             ACTGTGTGGTGCCAGCTCATGGATTGGCTGTTCTACCTAATTCGTTACCTTATACAGAAT
 
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rJMSF051G08+          CTGCAATTTTAGGATGCGCGGTGTTCACTGCTTATGGGGCTATGGCTCATGCTGCTGAAG
rJMSF034C19+                                             GGGGCTATGGCTCATGCTGCTGAAG
rJMSF008B04+          CTGCAATTTTAGGATGCGCGGTGTTCACTGCTTATGGGGCTATGGCTCATGCTGCTGAAG
rJMFF024L18+          CTGCAATTTTAGGATGCGCGGTGTTCACTGCTTATGGGGCTATGGCTCATGCTGCTGAAG
                      ____________________________________________________________
consensus             CTGCAATTTTAGGATGCGCGGTGTTCACTGCTTATGGGGCTATGGCTCATGCTGCTGAAG
 
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rJMSF051G08+          TGCGCCCTGGTGATGCCATTGCCATCATAGGCATAGGCGGTGTTGGCTCAAGCTGTCTGC
rJMSF034C19+          TGCGCCCTGGTGATGCCATTGCCATCATAGGCATAGGCGGTGTTGGCTCAAGCTGTCTGC
rJMSF008B04+          TGCGCCCTGGTGATGCCATTGCCATCATAGGCATAGGCGGTGTTGGCTCAAGCTGTCTGC
rJMFF024L18+          TGCGCCCTGGTGATGCCATTGCCATCATAGGCATAGGCGGTGTTGGCTCAAGCTGTCTGC
                      ____________________________________________________________
consensus             TGCGCCCTGGTGATGCCATTGCCATCATAGGCATAGGCGGTGTTGGCTCAAGCTGTCTGC
 
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rJMSF051G08+          AGATAGCACGAGCATTTGGAGCTTCAGAGATTATTGCAGTTGATGTCCATGATGAGAAAC
rJMSF034C19+          AGATAGCACGAGCATTTGGAGCTTCAGAGATTATTGCAGTTGATGTCCATGATGAGAAAC
rJMSF008B04+          AGATAGCACGAGCATTTGGAGCTTCAGAGATTATTGCAGTTGATGTCCATGATGAGAAAC
rJMFF024L18+          AGATAGCACGAGCATTTGGAGCTTCAGAGATTATTGCAGTTGATGTCCATGATGAGAAAC
                      ____________________________________________________________
consensus             AGATAGCACGAGCATTTGGAGCTTCAGAGATTATTGCAGTTGATGTCCATGATGAGAAAC
 
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rJMSF051G08+          TACAGAAAGCTAAAGCACTTGGAGCTACTCACACAATAAATTCACGGAATGAAGATGCAG
rJMSF034C19+          TACAGAAAGCTAAAGCACTTGGAGCTACTCACACAATAAATTCACGGAATGAAGATGCAG
rJMSF008B04+          TACAGAAAGCTAAAGCACTTGGAGCTACTCACACAATAAATTCACGGAATGAAGATGCAG
rJMFF024L18+          TACAGAAAGCTAAAGCACTTGGAGCTACTCACACAATAAATTCACGGAATGAAGATGCAG
                      ____________________________________________________________
consensus             TACAGAAAGCTAAAGCACTTGGAGCTACTCACACAATAAATTCACGGAATGAAGATGCAG
 
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rJMSF051G08+          TAAAGAAAATAAAGGAAATTACAGGAGGAATGGGAGTAGATATTGCTGTTGAAGCCCTGG
rJMSF034C19+          TAAAGAAAATAAAGGAAATTACAGGAGGAATGGGAGTAGATATTGCTGTTGAAGCCCTGG
rJMSF008B04+          TAAAGAAAATAAAGGAAATTACAGGAGGAATGGGAGTAGATATTGCTGTTGAAGCCCTGG
rJMFF024L18+          TAAAGAAAATAAAGGAAATTACAGGAGGAATGGGAGTAGATATTGCTGTTGAAGCCCTGG
                      ____________________________________________________________
consensus             TAAAGAAAATAAAGGAAATTACAGGAGGAATGGGAGTAGATATTGCTGTTGAAGCCCTGG
 
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rJMSF051G08+          GTAGAACTCAGACATTTGGGCAATGTGTACAAAGTGTTCGAGATGGAGGAAAAGCTGTAA
rJMSF034C19+          GTAGAACTCAGACATTTGGGCAATGTGTACAAAGTGTTCGAGATGGAGGAAAAGCTGTAA
rJMSF008B04+          GTAGAACTCAGACATTTGGGCAATGTGTACAAAGTGTTCGAGATGGAGGAAAAGCTGTAA
rJMFF024L18+          GTAGAACTCAGACATTTGGGCAATGTGTACAAAGTGTTCGAGATGGAGGAAAAGCTGTAA
                      ____________________________________________________________
consensus             GTAGAACTCAGACATTTGGGCAATGTGTACAAAGTGTTCGAGATGGAGGAAAAGCTGTAA
 
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rJMSF051G08+          TGATTGGGCTAACACTCTCCGGCGCTAAAGGGGAGGTGGATATTAACCATTTGGTCCGAA
rJMSF034C19+          TGATTGGGCTAACACTCTCCGGCGCTAAAGGGGAGGTGGATATTAACCATTTGGTCCGAA
rJMSF008B04+          TGATTGGGCTAACACTCTCCGGCGCTAAAGGGGAGGTGGATATTAACCATTTGGTCCGAA
rJMFF024L18+          TGATTGGGCTAACACTCTCCGGCGCTAAAGGGGAGGTGGATATTAACCATTTGGTCCGAA
                      ____________________________________________________________
consensus             TGATTGGGCTAACACTCTCCGGCGCTAAAGGGGAGGTGGATATTAACCATTTGGTCCGAA
 
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rJMSF051G08+          GGCAGATAAAAGTAATTGGATCATATGGAGCCAGAGCAAGACAAGACCTCCCAAAGTTGA
rJMSF034C19+          GGCAGATAAAAGTAATTGGATCATATGGAGCCAGAGCAAGACAAGACCTCCCAAAGTTGA
rJMSF008B04+          GGCAGATAAAAGTAATTGGATCATATGGAGCCAGAGCAAGACAAGACCTCCCAAAGTTGA
rJMFF024L18+          GGCAGATAAAAGTAATTGGATCATATGGAGCCAGAGCAAGACAAGACCTCCCAAAGTTGA
                      ____________________________________________________________
consensus             GGCAGATAAAAGTAATTGGATCATATGGAGCCAGAGCAAGACAAGACCTCCCAAAGTTGA
 
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rJMSF051G08+          TTAAACTTGCAGAAAGTGGAATTTTCAATCTCAGGGCTGCTGTCTCAAGGAAATGCAAAT
rJMSF034C19+          TTAAACTTGCAGAAAGTGGAATTTTCAATCTCAGGGCTGCTGTCTCAAGGAAATGCAAAT
rJMSF008B04+          TTAAACTTGCAGAAAGTGGAATTTTCAATCTCAGGGCTGCTGTCTCAAGGAAATGCAAAT
rJMFF024L18+          TTAAACTTGCAGAAAGTGGAATTTTCAATCTCAGGGCTGCTGTCTCAAGGAAATGCAAAT
                      ____________________________________________________________
consensus             TTAAACTTGCAGAAAGTGGAATTTTCAATCTCAGGGCTGCTGTCTCAAGGAAATGCAAAT
 
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rJMSF051G08+          TTGAAGAGGCTGCGGAGGCTTACAAAGATCTTGATCAGGGAAATATCACAGGGCGTGCTG
rJMSF034C19+          TTGAAGAGGCTGCGGAGGCTTACAAAGATCTTGATCAGGGAAATATCACAGGGCGTGCTG
rJMSF008B04+          TTGAAGAGGCTGCGGAGGCTTACAAAGATCTTGATCAGGGAAATATCACAGGGCGTGCTG
rJMFF024L18+          TTGAAGAGGCTGCGGAGGCTTACAAAGATCTTGATCAGGGAAATATCACAGGGCGTGCCG
                      ____________________________________________________________
consensus             TTGAAGAGGCTGCGGAGGCTTACAAAGATCTTGATCAGGGAAATATCACAGGGCGTGCTG
 
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rJMSF051G08+          TTGTTGAGATCATGTAATAATCGTGCAGTGATGGGTACAACAATGACCCCTTTTATTTTT
rJMSF034C19+          TTGTTGAGATCATGTAATAATCGTGCAGTGATGGGTACAACAATGACCCCTTTTATTTTT
rJMSF008B04+          TTGTTGAGATCATGTAATAATCGTGCAGTGATGGGTACAACAATGACCCCTTTTATTTTT
rJMFF024L18+          TTGTTGAGATCATGTAATAATCGTGCAGTGATGGGTACAACAATGACCCCTTTTATTTTT
                      ____________________________________________________________
consensus             TTGTTGAGATCATGTAATAATCGTGCAGTGATGGGTACAACAATGACCCCTTTTATTTTT
 
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rJMSF051G08+          GGATATTTTTT                                                 
rJMSF034C19+          GGATATTTTTTTAATTGTTGTCAACCTTGTTTTCTCCAGA                    
rJMSF008B04+          GGATATTTTTTTAATTGTTGTCAACTTGTTTTTCTCCAGA                    
rJMFF024L18+          GGATATTTTTTTAATTGTTGTCAACTTGTTTTTCTCCAGATGAATAATTAATAAATGCCC
                      ____________________________________________________________
consensus             GGATATTTTTTTAATTGTTGTCAACTTGTTTTTCTCCAGATGAATAATTAATAAATGCCC