| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024K23 | Sequence | 462 | 001953 (3) | gb|EYU28486.1| | 4e-69 | hypothetical protein MIMGU_mgv1a002735mg [Erythranthe guttata] | 624 | 012308 (4) | ref|XP_010249267.1| | 1e-52 | PREDICTED: protein NRT1/ PTR FAMILY 6.1-like isoform X2 [Nelumbo nucifera] |
| JMFN007M06 | Sequence | 615 | 012308 (4) | ref|XP_010250500.1| | 2e-108 | PREDICTED: protein NRT1/ PTR FAMILY 6.1 [Nelumbo nucifera] | |||||
| JMFN031L05 | Sequence | 623 | 012308 (4) | gb|AIU49685.1| | 3e-100 | major facilitator superfamily protein, partial [Buxus sinica] | |||||
| JMSF050L22 | Sequence | 577 | 003549 (2) | 613 | 012308 (4) | ref|XP_010249267.1| | 2e-72 | PREDICTED: protein NRT1/ PTR FAMILY 6.1-like isoform X2 [Nelumbo nucifera] | |||
This contig is upended
. : . : . : . : . : . :
JMFN007M06- CTAAC
JMFN031L05- ACCATAATGCTAAC
____________________________________________________________
consensus ACCATAATGCTAAC
. : . : . : . : . : . :
JMFN007M06- GCTAATCCTAGTGGAGTTTCTAACCCTCTCCGTCCAGCAAGCATACACGCTCAACACACA
JMFN031L05- GCTAATCCTAGTGGAGTTTCTAACCCTCTCCGTCCAGCAAGCATACACGCTCAACACACA
____________________________________________________________
consensus GCTAATCCTAGTGGAGTTTCTAACCCTCTCCGTCCAGCAAGCATACACGCTCAACACACA
. : . : . : . : . : . :
JMFN007M06- CATCGGCCGCCTCAAACTTCCGGTGACCTGCATGCCCGTCTTCCCCGGCCTCAGCATCTT
JMFN031L05- CATCGGCCGCCTCAAACTTCCGGTGACCTGCATGCCCGTCTTCCCCGGCCTCAGCATCTT
____________________________________________________________
consensus CATCGGCCGCCTCAAACTTCCGGTGACCTGCATGCCCGTCTTCCCCGGCCTCAGCATCTT
. : . : . : . : . : . :
JMFN007M06- CCTCCTCTTCTCTCTCTACTACTCCGTCTTTGTACCCCTCTCCCGCCGCATCACCGGCCA
JMFN031L05- CCTCCTCTTCTCTCTCTACTACTCCGTCTTTGTACCCCTCTCCCGCCGCATCACCGGCCA
____________________________________________________________
consensus CCTCCTCTTCTCTCTCTACTACTCCGTCTTTGTACCCCTCTCCCGCCGCATCACCGGCCA
. : . : . : . : . : . :
JMFN007M06- CCCTCACGGCGCCTCCCAGCTCCAGAGGGTCGGCATCGGTTTAGCCGTTTCCATCGCCTC
JMFN031L05- CCCTCACGGCGCCTCCCAGCTCCAGAGGGTCGGCATCGGTTTAGCCGTTTCCATCGCCTC
____________________________________________________________
consensus CCCTCACGGCGCCTCCCAGCTCCAGAGGGTCGGCATCGGTTTAGCCGTTTCCATCGCCTC
. : . : . : . : . : . :
JMFN007M06- GGTGGCCTGGGCCGGCGTCTTCGAAAGGTACCGGAGAAACTACGCGATTAAACACGGGTA
JMFN031L05- GGTGGCCTGGGCCGGCGTCTTCGAAAGGTACCGGAGAAACTACGCGATTAAACACGGGTA
rJMSF050L22+ TCTTCGAAAGGTACCGGAGAAACTACGCGATTAAACACGGGTA
____________________________________________________________
consensus GGTGGCCTGGGCCGGCGTCTTCGAAAGGTACCGGAGAAACTACGCGATTAAACACGGGTA
. : . : . : . : . : . :
JMFN007M06- TGAAGCGAGTTTCTTGACGGCAATGCCGGAGCTGAGCGCGTACTGGCTGCTGATTCAGTA
JMFN031L05- TGAAGCGAGTTTCTTGACGGCAATGCCGGAGCTGAGCGCGTACTGGCTGCTGATTCAGTA
rJMSF050L22+ TGAAGCGAGTTTCTTGACGGCAATGCCGGAGCTGAGCGCGTACTGGCTGCTGATTCAGTA
rJMFF024K23+ GCGCGTACTGGCTGCTGATTCAGTA
____________________________________________________________
consensus TGAAGCGAGTTTCTTGACGGCAATGCCGGAGCTGAGCGCGTACTGGCTGCTGATTCAGTA
. : . : . : . : . : . :
JMFN007M06- CTGTCTGATAGGGATCTCAGAGGTATTCTGCATAGTGGGATTGCTGGAGTTTCTATACGA
JMFN031L05- CTGTCTGATAGGGATCGCAGAGGTGTTCTGCATAGTGGGATTGCTGGAGTTTCTATACGA
rJMSF050L22+ CTGTCTGATAGGGATCGCAGAGGTGTTCTGCATAGTGGGATTGCTGGAGTTTCTATACGA
rJMFF024K23+ CTGTCTGATAGGGATCGCAGAGGTGTTNTGCATAGTGGGATTGCTGGAGTTTTTATACGA
____________________________________________________________
consensus CTGTCTGATAGGGATCGCAGAGGTGTTCTGCATAGTGGGATTGCTGGAGTTTCTATACGA
. : . : . : . : . : . :
JMFN007M06- GGAAGCGCCGGACGCGATGAGAAGCATAGGGTCGGCTTACGCCGCCGTGGCCGGCGGTCT
JMFN031L05- GGAAGCGCCGGACGCGATGAGAAGCATAGGGTCGGCTTACGCCGCCGTGGCCGGCGGTCT
rJMSF050L22+ GGAAGCGCCGGACGCGATGAGAAGCATAGGGTCGGCTTACGCCGCCGTGGCCGGCGGTCT
rJMFF024K23+ GGAAGCGCCGGACGCGATGAGAAGCATAGGGTCGGCTTACGCCGCCGTGGCCGGCGGTCT
____________________________________________________________
consensus GGAAGCGCCGGACGCGATGAGAAGCATAGGGTCGGCTTACGCCGCCGTGGCCGGCGGTCT
. : . : . : . : . : . :
JMFN007M06- GGGGTGCTTTGCGGCCACAATACTGAACAGCATTGTGAAAGGCGTAACCGGCGGGAAGGA
JMFN031L05- GGGGTGCTTTGCGGCCACAATACTGAACAGCATTGTGAAAGGCGTAACCGGCGGGAAGGA
rJMSF050L22+ GGGGTGCTTTGCGGCCACAATACTGAACAGCATTGTGAAAGGCGTAACCGGCGGGAAGGA
rJMFF024K23+ GGGGTGCTTTGCGGCCACAATACTGAACAGCATTGTGAAAGGCGTAACCGGCGGGAAGGA
____________________________________________________________
consensus GGGGTGCTTTGCGGCCACAATACTGAACAGCATTGTGAAAGGCGTAACCGGCGGGAAGGA
. : . : . : . : . : . :
JMFN007M06- AGAGGAAGGGCGACAGTCGTGGCTGTCTCAGAATGTANATACCGGACGATTCGACTACCT
JMFN031L05- AGA-GAANGGCGACAGTCGTGGCTGTCTCAAAATGTNNAATACGGACGATTCGACTACCT
rJMSF050L22+ AGAGGAAGGGCGACAGTCGTGGCTGTCTCAGAATGTAAATACCGGACGATTCGACTACCT
rJMFF024K23+ AGAGGAAGGGCGACAGTCGTGGCTGTCTCAGAATGTAAATACCGGACGATTCGACTACCT
____________________________________________________________
consensus AGAGGAAGGGCGACAGTCGTGGCTGTCTCAGAATGTAAATACCGGACGATTCGACTACCT
. : . : . : . : . : . :
JMFN007M06- TTACTGGCTG
JMFN031L05- TTACTGGCTG
rJMSF050L22+ TTACTGGCTGTTAACGTTGCTGAGTGTGGTCAATTTCTGCGGTTTTGTGTACGCCGCCCG
rJMFF024K23+ TTACTGGCTGTTAACGTTGCTGAGTGTGGTCAATTTCTGCGGTTTTGTGTACGCCGCCCG
____________________________________________________________
consensus TTACTGGCTGTTAACGTTGCTGAGTGTGGTCAATTTCTGCGGTTTTGTGTACGCCGCCCG
. : . : . : . : . : . :
rJMSF050L22+ CCGGTATCAGTACCGGAAGAAGCCCGGAGCTGAGACGGACCTGCCGGCGGCGAAAACTGA
rJMFF024K23+ CCGGTATCAGTACCGGAAGAAGCCCGGAGCTGAGACGGACCTGCCGGCGGCGAAAACTGA
____________________________________________________________
consensus CCGGTATCAGTACCGGAAGAAGCCCGGAGCTGAGACGGACCTGCCGGCGGCGAAAACTGA
. : . : . : . : . : . :
rJMSF050L22+ GCTACAAGCCGTAGCAGAGTGAAGNTGCGTTGAATTCTTTTTGGATTTGTTTGCTTATAC
rJMFF024K23+ GCTACAAGCCGTAGCAGAGTGAAGCTGCGTTGAATTCTTTTTGGATTTGTTTGCTTATAC
____________________________________________________________
consensus GCTACAAGCCGTAGCAGAGTGAAGCTGCGTTGAATTCTTTTTGGATTTGTTTGCTTATAC
. : . : . : . : . : . :
rJMSF050L22+ CTTTCGATTTTAATTACACCAAATTAAAAGCATTTTGGATTTCCATAGAAATGGACCTCA
rJMFF024K23+ CTTTCGATTTTAATTACACCAAATTAAAAGCATTTTGGATTTCCATAGAAATGGACCTCA
____________________________________________________________
consensus CTTTCGATTTTAATTACACCAAATTAAAAGCATTTTGGATTTCCATAGAAATGGACCTCA
. : . : . : . : . : . :
rJMSF050L22+ CATGTAACCATGTTGATGTTCTGCATTAAT
rJMFF024K23+ CATGTAA-CATGTTGATGTTCTGCATTAATGTGAACCAGCTATCATTCCTACTCATTATC
____________________________________________________________
consensus CATGTAACCATGTTGATGTTCTGCATTAATGTGAACCAGCTATCATTCCTACTCATTATC
. : . : . : . : . : . :
rJMFF024K23+ ATGCATGTTTATTGTATTAACATTGGGGGATTTTTGGTAAATAGCTAGCTGATTGAGTTA
____________________________________________________________
consensus ATGCATGTTTATTGTATTAACATTGGGGGATTTTTGGTAAATAGCTAGCTGATTGAGTTA