Contig 012307:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016I22Sequence579010758 (4)ref|XP_009779293.1|4e-40PREDICTED: MLO-like protein 9 [Nicotiana sylvestris]726012307 (3)ref|XP_009586729.1|4e-63PREDICTED: MLO-like protein 9 [Nicotiana tomentosiformis]
JMFF024K01Sequence509010758 (4)ref|XP_009586729.1|1e-37PREDICTED: MLO-like protein 9 [Nicotiana tomentosiformis]752012307 (3)ref|XP_009586729.1|3e-67PREDICTED: MLO-like protein 9 [Nicotiana tomentosiformis]
JMSF014D10Sequence207010758 (4)807012307 (3)ref|XP_009586729.1|4e-81PREDICTED: MLO-like protein 9 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF014D10+                       CTGCAGTGCTGTATTTGCTGCTGAATGTGAATGGATGGCAAACAATG
                      ____________________________________________________________
consensus                          CTGCAGTGCTGTATTTGCTGCTGAATGTGAATGGATGGCAAACAATG
 
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rJMSF014D10+          TTATGGCTATCTATACTACCTTTCATTACACTGTTAGTAGTTGGTACAAAGCTTCAAGCA
rJMFF016I22+                                                               TCAAGCA
rJMFF024K01+                                      CACTGTTAGTAGTTGGTACAAAGCTTCAAGCA
                      ____________________________________________________________
consensus             TTATGGCTATCTATACTACCTTTCATTACACTGTTAGTAGTTGGTACAAAGCTTCAAGCA
 
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rJMSF014D10+          ATTATAACACAAATGGCGATTGAGATTGAACAAAGGCATGATGTAGTTCAGGGCATACCA
rJMFF016I22+          ATTATAACACAAATGGCGATTGAGATTGAACAAAGGCATGATGTAGTTCAGGGCATACCA
rJMFF024K01+          ATTATAACACAAATGGCGATTGAGATTGAACAAAGGCATGATGTAGTTCAGGGCATACCA
                      ____________________________________________________________
consensus             ATTATAACACAAATGGCGATTGAGATTGAACAAAGGCATGATGTAGTTCAGGGCATACCA
 
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rJMSF014D10+          CTGGTGCAAGTCTCAGACACATATTTTTGGTTTAGCAGACCAAAGTTAGTCCTTCATCTT
rJMFF016I22+          CTGGTGCAAGTCTCAGACACATATTTTTGGTTTAGCAGACCAAAGTTAGTCCTTCATCTT
rJMFF024K01+          CTGGTGCAAGTCTCAGACACATATTTTTGGTTTAGCAGACCAAAGTTAGTCCTTCATCTT
                      ____________________________________________________________
consensus             CTGGTGCAAGTCTCAGACACATATTTTTGGTTTAGCAGACCAAAGTTAGTCCTTCATCTT
 
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rJMSF014D10+          ATCCATCTCACCCTTTTTCAGAATGCGTTTGACATAACATATTTCCTCTGGAATTCGTAT
rJMFF016I22+          ATCCATCTCACCCTTTTTCAGAATGCGTTTGACATAACATATTTCCTCTGGAATTCGTAT
rJMFF024K01+          ATCCATCTCACCCTTTTTCAGAATGCGTTTGACATAACATATTTCCTCTGGAATTCGTAT
                      ____________________________________________________________
consensus             ATCCATCTCACCCTTTTTCAGAATGCGTTTGACATAACATATTTCCTCTGGAATTCGTAT
 
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rJMSF014D10+          GAGTTTGGATCAGATTCTTGCTTTCACGAAAGCTTCCATCTCGCCATGGCCAGAGTGGCA
rJMFF016I22+          GAGTTTGGATCAGATTCTTGCTTTCACGAAAGCTTCCATCTCGCCATGGCCAGAGTGGCA
rJMFF024K01+          GAGTTTGGATCAGATTCTTGCTTTCACGAAAGCTTCCATCTCGCCATGGCCAGAGTGGCA
                      ____________________________________________________________
consensus             GAGTTTGGATCAGATTCTTGCTTTCACGAAAGCTTCCATCTCGCCATGGCCAGAGTGGCA
 
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rJMSF014D10+          TTCGGGATTGGGGTACAGTTCATGTGCAGCTACATTACGCTTCCACTATATGCGCTCGTC
rJMFF016I22+          TTCGGGATTGGGGTACAGTTCATGTGCAGCTACATTACGCTTCCACTATATGCGCTCGTC
rJMFF024K01+          TTCGGGATTGGGGTACAGTTCATGTGCAGCTACATTACGCTTCCACTATATGCGCTCGTC
                      ____________________________________________________________
consensus             TTCGGGATTGGGGTACAGTTCATGTGCAGCTACATTACGCTTCCACTATATGCGCTCGTC
 
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rJMSF014D10+          ACCCAGATGGGTTCTAGTATGAAGCAGTCCATTTTTGATGAACACACTTCAAAAGCCCTG
rJMFF016I22+          ACCCAGATGGGTTCTAGTATGAAGCAGTCCATTTTTGATGAACACACTTCAAAAGCCCTG
rJMFF024K01+          ACCCAGATGGGTTCTAGTATGAAGCAGTCCATTTTTGATGAACACACTTCAAAAGCCCTG
                      ____________________________________________________________
consensus             ACCCAGATGGGTTCTAGTATGAAGCAGTCCATTTTTGATGAACACACTTCAAAAGCCCTG
 
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rJMSF014D10+          ATGAACTGGCGCAAGAAGGTGCAGCACAAGAACCACGACCACCACGACCATGTGACGGGG
rJMFF016I22+          ATGAACTGGCGCAAGAAGGTGCAGCACAAGAACCACGACCACCACGACCATGTGACGGGG
rJMFF024K01+          ATGAACTGGCGCAAGAAGGTGCAGCACAAGAACCACGACCACCACGACCATGTGACGGGG
                      ____________________________________________________________
consensus             ATGAACTGGCGCAAGAAGGTGCAGCACAAGAACCACGACCACCACGACCATGTGACGGGG
 
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rJMSF014D10+          CTGCAGCAAGGAAAGTTGGGAGGCAGCAGCTCCAGTGATTTACCAGACACGTCGGCAGCT
rJMFF016I22+          CTGCAGCAAGGAAAGTTGGGAGGCAGCAGCTCCAGTGATTTACCAGACACGTCGGCAGCT
rJMFF024K01+          CTGCAGCAAGGAAAGTTGGGAGGCAGCAGCTCCAGTGATTTACCAGACACGTCGGCAGCT
                      ____________________________________________________________
consensus             CTGCAGCAAGGAAAGTTGGGAGGCAGCAGCTCCAGTGATTTACCAGACACGTCGGCAGCT
 
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rJMSF014D10+          GGGCAATGTTCCATAGATAATGATGGTCATGATTATTTCTCTTCTGCTTCAAGACACACC
rJMFF016I22+          GGGCAATGTTCCATAGATAATGATGATCATGATTATTTCTCTTCTGCTTCAAGACACACC
rJMFF024K01+          GGGCAATGTTCCATAGATAATGATGATCATGATTATTTCTCTTCTGCTTCAAGACACACC
                      ____________________________________________________________
consensus             GGGCAATGTTCCATAGATAATGATGATCATGATTATTTCTCTTCTGCTTCAAGACACACC
 
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rJMSF014D10+          ATAGAAATTCGCGATGATCAGCAGCAGGATGAGGAAAATAGTGATGACGATGATGATTCT
rJMFF016I22+          ATAGAAATTCGCGATGATCAGCAGCAGGATGAGGAAAATAGTGATGACGATGATGATTCT
rJMFF024K01+          ATAGAAATTCGCGATGATCAGCAGCAGGATGAGGAAAATAGTGATGACGATGATGATTCT
                      ____________________________________________________________
consensus             ATAGAAATTCGCGATGATCAGCAGCAGGATGAGGAAAATAGTGATGACGATGATGATTCT
 
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rJMSF014D10+          AAGCTCGATAATAATATTGACCTTCTTACACCTCCTTAATTCATTCATAATATAATGTTC
rJMFF016I22+          AAGCTCGATAATAATATTGACCTTCTTACACCTCCTTAATTCATTCATAATATAATGTTC
rJMFF024K01+          AAGCTCGATAATAATATTGACCTTCTTACACCTCCTTAATTCATTCATAATATAATGTTC
                      ____________________________________________________________
consensus             AAGCTCGATAATAATATTGACCTTCTTACACCTCCTTAATTCATTCATAATATAATGTTC
 
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rJMSF014D10+          TGATTGATCTGTTAAAATGGTCATACATAC                              
rJMFF016I22+          TGATTGATCTGTTAAAATGGTCATACATACAAGCATTAATTGTATTGCATGACTGCAAA 
rJMFF024K01+          TGATTGATCTGTTAAAATGGTCATACATACAAGCATTAATTGTATTGCATGACTGCAAAT
                      ____________________________________________________________
consensus             TGATTGATCTGTTAAAATGGTCATACATACAAGCATTAATTGTATTGCATGACTGCAAAT