Contig 012296:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020C24-                                                             ATCATTTAA
                      ____________________________________________________________
consensus                                                                ATCATTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+                                                 AACATATGAATGATCATATCAT
rJMFF020C24-          TTTGCTTAAGTTTTCATAAAATAAAATGCAAATTACCAAACATGTGAATGATCATATCAT
                      ____________________________________________________________
consensus             TTTGCTTAAGTTTTCATAAAATAAAATGCAAATTACCAAACATGTGAATGATCATATCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+           TATGTTTGAAATATAATTTCCCAAATTAAAATAAATAAACAAATAAAAAGAAAGAGAGAA
rJMFF020C24-          TATGTTTGAAATATAATTTCCCAAATTAAAATAAATAAACAAATAAAAAGAAAGAGAGAA
                      ____________________________________________________________
consensus             TATGTTTGAAATATAATTTCCCAAATTAAAATAAATAAACAAATAAAAAGAAAGAGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+           GAAAGATCATATAAATAAAATAAATAATGTAACAATTATTTATCTGCTAAATCCTTGGTG
JMFF020C24+                                                             ATCCTTGGTG
rJMFF020C24-          GAAAGATCATATAAATAAAATAAATAATGTAACAATTATTTATCTGCTAAATCCTTGGTG
                      ____________________________________________________________
consensus             GAAAGATCATATAAATAAAATAAATAATGTAACAATTATTTATCTGCTAAATCCTTGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+           TTCTGATTACTTTGATCATTATTATTTTTACTATCATTATTTTTATTATCATTATTATTA
JMFF020C24+           TTNTGATTACTTTGATCATTATTATTTTTACTATCATTATTTTTATTATCATTATTATTA
rJMFF020C24-          TTCTGATTACTTTGATCATTATTATTTTTACTATCATTATTTTTATTATCATTATTATTA
                      ____________________________________________________________
consensus             TTCTGATTACTTTGATCATTATTATTTTTACTATCATTATTTTTATTATCATTATTATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+           TTATTATTATCATTATTATTGTGATGATGATGATCAGGTCTCTTTGCAAACTTCTTTACC
JMFF020C24+           TTATTATTATCATTATTATTGNGATGATGATGATCAGGTCTCTTTGCAAACTTCTTTACC
rJMFF020C24-          TTATTATTATCATTATTATTGTGATGATGATGATCAGGTCTCTTTGCAAACTTCTTTACC
                      ____________________________________________________________
consensus             TTATTATTATCATTATTATTGTGATGATGATGATCAGGTCTCTTTGCAAACTTCTTTACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+           CATTGGAAGGTCAAGAACTTCTTAGCGGCGGTGCCTTTTCCGGAGTCTTTGTGGGTCCCC
JMFF020C24+           CATTGGAAGGTCAAGAACTTNTTAGCGGCGGTGCCTTTTCCGGAGTNTTTGTGGGTCCCC
rJMFF020C24-          CATTGGAAGGTCAAGAACTTCTTAGCGGCGGTGCCTTTTCCGGAGTCTTTGTGGGTCCCC
                      ____________________________________________________________
consensus             CATTGGAAGGTCAAGAACTTCTTAGCGGCGGTGCCTTTTCCGGAGTCTTTGTGGGTCCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+           TTCTTCTCGCCGGGCGCCGGAAGCGGCTCTGGGTCCCACTGGTCAGCCCAGGACAGCCCC
JMFF020C24+           TTNTTCTCGCCGGGCGCCGGAAGCGGCTTTGGGTCCCACTGGTCAGCCCAGGACAGCCCC
rJMFF020C24-          TTCTTCTCGCCGGGCGCCGGAAGCGGCTCTGGGTCCCACTGGTCAGCCCAGGACAGCCCC
                      ____________________________________________________________
consensus             TTCTTCTCGCCGGGCGCCGGAAGCGGCTCTGGGTCCCACTGGTCAGCCCAGGACAGCCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+           TCAGCCTTCTGGTCGCCCATGGCTGCCTGCTAGCTACTACCTGGGCCTTCCTGCAACTTT
JMFF020C24+           TCAGCCTTNTGGTCGCCCATGGCTGCCTGCTAGCTACTACCTGGGCCTTCCTGCAACTTT
rJMFF020C24-          TCAGCCTTCTGGTCGCCCATGGCTGCCTGCTAGCTACTACCTGGGCCTTCCTGCAACTTT
                      ____________________________________________________________
consensus             TCAGCCTTCTGGTCGCCCATGGCTGCCTGCTAGCTACTACCTGGGCCTTCCTGCAACTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS024D10+           AATTTTATATTTTTTTTTTTATCAACTTTATATATTATTCAAATGACTGTGGCTGGGGAA
JMFF020C24+           AATTTTATA-TTTTTTTTTTATCAACTTTATATATTATTCAAATGACTGTGGCTGGGGAA
rJMFF020C24-          AATTTTATA-TTTTTTTTTTATCAACTTTATATATTATTCAAATGACTGTGGCTGGGGAA
                      ____________________________________________________________
consensus             AATTTTATA-TTTTTTTTTTATCAACTTTATATATTATTCAAATGACTGTGGCTGGGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF020C24+           CCTCATTCCCCGGCCACAGC                                        
rJMFF020C24-          CCTCATTCCCCGGCCACAGCCATCGCTGTTCCAGACAGCGATGACTCGAGAACCATGGTA
                      ____________________________________________________________
consensus             CCTCATTCCCCGGCCACAGCCATCGCTGTTCCAGACAGCGATGACTCGAGAACCATGGTA