Contig 012291:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002O05Sequence488012291 (12)ref|XP_009793584.1|1e-94PREDICTED: amino acid permease 6-like [Nicotiana sylvestris]
JMFF012A02Sequence554012291 (12)ref|XP_009793584.1|1e-108PREDICTED: amino acid permease 6-like [Nicotiana sylvestris]
JMFF015H13Sequence466012291 (12)ref|XP_009793584.1|8e-91PREDICTED: amino acid permease 6-like [Nicotiana sylvestris]
JMFF015H14Sequence528012291 (12)ref|XP_009793584.1|2e-100PREDICTED: amino acid permease 6-like [Nicotiana sylvestris]
JMFF015N15Sequence607012291 (12)ref|XP_009793584.1|5e-112PREDICTED: amino acid permease 6-like [Nicotiana sylvestris]
JMFF019I20Sequence733012291 (12)emb|CDP00979.1|1e-123unnamed protein product [Coffea canephora]
JMFF020G16Sequence490012291 (12)ref|XP_009793584.1|1e-96PREDICTED: amino acid permease 6-like [Nicotiana sylvestris]
JMFF031L02Sequence201012291 (12)gb|EYU34219.1|2e-30hypothetical protein MIMGU_mgv1a005305mg [Erythranthe guttata]
JMFF032K22Sequence636012291 (12)ref|XP_009793584.1|9e-105PREDICTED: amino acid permease 6-like [Nicotiana sylvestris]
JMFF038E21Sequence729012291 (12)emb|CDP00979.1|1e-124unnamed protein product [Coffea canephora]
JMFF039D15Sequence483012291 (12)ref|XP_009793584.1|5e-93PREDICTED: amino acid permease 6-like [Nicotiana sylvestris]
JMSF039D22Sequence676012291 (12)ref|XP_011074307.1|2e-118PREDICTED: amino acid permease 6 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF039D22+                                                                    TA
                      ____________________________________________________________
consensus                                                                       TA
 
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rJMSF039D22+          CTCANCTGTCCTCATCGAGATACAGGACACATTGAGATCACACCCACCAGAAAACAAGGT
rJMFF038E21+                                                                CAAGGT
rJMFF019I20+                                                                CAAGGT
                      ____________________________________________________________
consensus             CTCANCTGTCCTCATCGAGATACAGGACACATTGAGATCACACCCACCAGAAAACAAGGT
 
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rJMFF012A02+                           GGGTTGGAGTGACCACAACCACATTGTTCTATGTCCTATGTGG
rJMSF039D22+          AATGAAGAAAGCATCT-GGGTTGGAGTGACCACAACCACATTGTTCTATGTCCTATGTGG
rJMFF038E21+          AATGAAGAAAGCATCTGGGGTTGGAGTGACCACAACCACATTGTTCTATGTCCTATGTGG
rJMFF020G16+                                                               TATGTGG
rJMFF015N15+                                                     TTCTATGTCCTATGTGG
rJMFF032K22+                                                               TATGTGG
rJMFF019I20+          AATGAAGAAAGCATCTGGGGTTGGAGTGACCACAACCACATTGTTCTATGTCCTATGTGG
                      ____________________________________________________________
consensus             AATGAAGAAAGCATCTGGGGTTGGAGTGACCACAACCACATTGTTCTATGTCCTATGTGG
 
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rJMFF012A02+          TTGCCTNGGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCCTCACCGGTTTCGG
rJMFF002O05+                                                                   CGG
rJMSF039D22+          TTGCCTTGGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCCTCACCGGTTTCGG
rJMFF038E21+          TTGCCTTGGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCCTCACCGGTTTCGG
rJMFF015H14+                 GGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCNTCACCGGTTTCGG
rJMFF020G16+          TTGCCTTGGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCCTCACCGGTTTCGG
rJMFF015H13+                                                          CACCGGTTTCGG
rJMFF015N15+          TTGCCTTGGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCCTCACCGGTTTCGG
rJMFF032K22+          TTGCCTTGGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCCTCACCGGTTTCGG
rJMFF019I20+          TTGCCTTGGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCCTCACCGGTTTCGG
                      ____________________________________________________________
consensus             TTGCCTTGGCTATGCGGCGTTCGGAAACAATGCTCCCGGAAACTTCCTCACCGGTTTCGG
 
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rJMFF012A02+          CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMFF002O05+          CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMFF039D15+            TCTACGAGCCNTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMSF039D22+          CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMFF038E21+          CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMFF015H14+          CTTCTACGAGCCNTTCTGGNTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMFF020G16+          CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMFF015H13+          CTTNTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTNTGCATCGCCATCCATCTCAT
rJMFF015N15+          CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMFF032K22+          CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
rJMFF019I20+          CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
                      ____________________________________________________________
consensus             CTTCTACGAGCCCTTCTGGCTGATCGACTTCGCCAACGTCTGCATCGCCATCCATCTCAT
 
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rJMFF012A02+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF002O05+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF039D15+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMSF039D22+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF038E21+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF015H14+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF020G16+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF015H13+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF015N15+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF032K22+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
rJMFF019I20+          CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
                      ____________________________________________________________
consensus             CGGCGCTTACCAGGTTTTTTGCCAACCACTATTCAGCTTTGTCGAGTCTCGCTGCAGCCA
 
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rJMFF012A02+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF002O05+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF039D15+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMSF039D22+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF038E21+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF015H14+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF020G16+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF015H13+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF015N15+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF032K22+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
rJMFF019I20+          GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
                      ____________________________________________________________
consensus             GAGATGGCCAGACAGCAAATTCATAACCGCGGAATATGAAGTGAATGTCCCATGCTTTGG
 
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rJMFF012A02+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF002O05+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF039D15+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMSF039D22+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF038E21+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF015H14+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF020G16+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF015H13+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF031L02+                                       TGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF015N15+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF032K22+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
rJMFF019I20+          CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
                      ____________________________________________________________
consensus             CACTTGCTCCATCAACTTCTTCAGGCTGGTGTGGAGAACAGGTTATGTCATAGTCACAGC
 
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rJMFF012A02+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF002O05+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF039D15+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMSF039D22+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF038E21+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF015H14+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF020G16+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF015H13+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF031L02+          CGTGGTNGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF015N15+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF032K22+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
rJMFF019I20+          CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
                      ____________________________________________________________
consensus             CGTGGTTGCCATGATATTCCCGTTCTTCAACGACTTCTTGGGGCTGATTGGGGCCGCCTC
 
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rJMFF012A02+          GTTCTATCCACTCACCGTCCACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF002O05+          GTTCTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF039D15+          GTTCTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMSF039D22+          GTTCTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF038E21+          GTTCTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF015H14+          GTTCTATCCACTCACCCTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF020G16+          GTTCTATCCACTCACCGTCCACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF015H13+          GTTCTATCCACTCACCCTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF031L02+          GTTNTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF015N15+          GTTCTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF032K22+          GTTCTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
rJMFF019I20+          GTTCTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
                      ____________________________________________________________
consensus             GTTCTATCCACTCACCGTCTACTTCCCGATTGAGATGCACATCGCCCAGACCAAGATCCC
 
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rJMFF012A02+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF002O05+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF039D15+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMSF039D22+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF038E21+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF015H14+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF020G16+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF015H13+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF031L02+          CAAGTACTCGTTCAGATGGATATGNNTGAAGATCCTGAGCNGGACTTGCC          
rJMFF015N15+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF032K22+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
rJMFF019I20+          CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
                      ____________________________________________________________
consensus             CAAGTACTCGTTCAGATGGATATGGCTGAAGATCCTGAGCTGGACTTGCCTGGTTGTATC
 
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rJMFF012A02+          GCT                                                         
rJMFF002O05+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTCGCGTCTGATGTC-AAGACGTACAAAC
rJMFF039D15+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTCGCGTCTGATGTC-AAGACGTACAAAC
rJMSF039D22+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTCGCGTCTGATGTC-AAGACGTACAAAC
rJMFF038E21+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTCGNGTNTGATGTC-AAGACGTACAAAC
rJMFF015H14+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCT                           
rJMFF020G16+          GCT                                                         
rJMFF015H13+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTC                          
rJMFF015N15+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTCGCGTCTGATGTC-AAGACGTACAAAC
rJMFF032K22+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTCGCGTCTGATGTCTAAGACGTACAAAC
rJMFF019I20+          GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTCGCGTTTGATGTC-AAGACGTACAAAC
                      ____________________________________________________________
consensus             GCTCGTCGCTGCTGCTGGATCCATTCAAGGGCTCGCGTCTGATGTC-AAGACGTACAAAC
 
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rJMFF002O05+          CTTTC                                                       
rJMFF039D15+          CTTTC                                                       
rJMSF039D22+          CTTTCAAAGCTCAAT                                             
rJMFF038E21+          CTTTCAAAGCTCAATGAGTAGCCGGAACAAAGTAATGAACTTGNGAAAAATGTAATGTTA
rJMFF015N15+          CTNTCAAAGCTCAATGAGTANCCGGAACAAAGTAATGAA                     
rJMFF032K22+          CTNTCAAAGCTCAATGAGTANCCGGAACAAAGTAATGAACTTGNGAAAAATGTAATGNTA
rJMFF019I20+          CTTTCAAAGCTCAATGAGTAGCCGGAACAAAGTAATGAACTTGTGAAAAATGTAATGTTA
                      ____________________________________________________________
consensus             CTTTCAAAGCTCAATGAGTAGCCGGAACAAAGTAATGAACTTGTGAAAAATGTAATGTTA
 
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rJMFF038E21+          NGAAATAANTTAAGAANTAGTTCATGGTAGTGAACTGCAATGTAGTGATGTTC       
rJMFF032K22+          NGAAATAA                                                    
rJMFF019I20+          TGAAATAAGTNAAGAACTAGTTCATGGTAGTGAGCTGCAATGTAGTGATGTTCAAAAAAT
                      ____________________________________________________________
consensus             TGAAATAAGTTAAGAACTAGTTCATGGTAGTGAGCTGCAATGTAGTGATGTTCAAAAAAT