Contig 012290:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019D24Sequence540009511 (2)759012290 (3)ref|XP_009601149.1|132PREDICTED: uncharacterized protein LOC104096481 [Nicotiana tomentosiformis] ref|
JMFF025K10Sequence574008794 (2)741012290 (3)ref|XP_009763121.1|115PREDICTED: uncharacterized protein LOC104215073 [Nicotiana sylvestris]
JMSF043F17Sequence803009511 (2)ref|XP_009763121.1|86.7PREDICTED: uncharacterized protein LOC104215073 [Nicotiana sylvestris]781012290 (3)ref|XP_009601149.1|118PREDICTED: uncharacterized protein LOC104096481 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043F17+ CGACATTGAGTTCAGATCAGAGTTTGAAATAGCT
                      ____________________________________________________________
consensus CGACATTGAGTTCAGATCAGAGTTTGAAATAGCT
 
. : . : . : . : . : . :
rJMSF043F17+ AGGTCCACCAAAACTTACAAGTCAGTTCTTCCAAGCATTGCCCAACATTTTTTGTGGGTA
rJMFF025K10+ TTTTTGTGGGTA
rJMFF019D24+ TTTTTGTGGGTA
                      ____________________________________________________________
consensus AGGTCCACCAAAACTTACAAGTCAGTTCTTCCAAGCATTGCCCAACATTTTTTGTGGGTA
 
. : . : . : . : . : . :
rJMSF043F17+ AATGCGATCGCCTGCAAAAGATCATTTCTATAGTATCTGAAGCAGCTAAGCAAAGTTTGA
rJMFF025K10+ AATGCGATCGCCTGCAAAAGATCATTTCTATAGTATCTGAGGCAGCTAAGCAAAGTTTGA
rJMFF019D24+ AATGCGATCGCCTGCAAAAGATCATTTCTATAGTATCTGAAGCAGCTAAGCAAAGTTTGA
                      ____________________________________________________________
consensus AATGCGATCGCCTGCAAAAGATCATTTCTATAGTATCTGAAGCAGCTAAGCAAAGTTTGA
 
. : . : . : . : . : . :
rJMSF043F17+ AGAAGAAAGGTATGCCTGTTCCACCGTGGAGGCAAGCTGAGTATGTCAAGGCCAAATGGT
rJMFF025K10+ AGAAGAAAGGTATGCCTGTTCCNCCATGGAGGCAAGCTGAGTATGTCAAGGCCAAATGGT
rJMFF019D24+ AGAAGAAAGGTATGCCTGTTCCACCGTGGAGGCAAGCTGAGTATGTCAAGGCCAAATGGT
                      ____________________________________________________________
consensus AGAAGAAAGGTATGCCTGTTCCACCGTGGAGGCAAGCTGAGTATGTCAAGGCCAAATGGT
 
. : . : . : . : . : . :
rJMSF043F17+ TCTCTCCCTACACTAGAATTGACTTGACATCTTCAAAGGCAGAGACTTGTTTGAAGGTG-
rJMFF025K10+ TCTNTCCCTACACTAGAATTGATTTGACATNTTCAAAGGCAGAGACTTGTTTGAAGGTGG
rJMFF019D24+ TCTCTCCCTACACTAGAATTGACTTGACATCTTCAAAGGCAGAGACTTGTTTGAAGGTG-
                      ____________________________________________________________
consensus TCTCTCCCTACACTAGAATTGACTTGACATCTTCAAAGGCAGAGACTTGTTTGAAGGTG-
 
. : . : . : . : . : . :
rJMSF043F17+ --GAGGAGGAGAGTGTGTGTTTGTGTGAAGCTAACTTGAAAGTGGGAAAATCGAAGCCGA
rJMFF025K10+ AGGAGGAGGAGAGTGTGTGTTTGTGTGAAGCTAACTTGAAAGTGGGAAAGCCGAAGCCGA
rJMFF019D24+ --GAGGAGGAGAGTGTGTGTTTGTGTGAAGCTAACTTGAAAGTGGGAAAATCGAAGCCGA
                      ____________________________________________________________
consensus --GAGGAGGAGAGTGTGTGTTTGTGTGAAGCTAACTTGAAAGTGGGAAAATCGAAGCCGA
 
. : . : . : . : . : . :
rJMSF043F17+ GTAGTAGGAAGGAAGATGATGAGAGTTGCAGTGAGTTTGAGGTTCTGATGTTTGGAGAGG
rJMFF025K10+ GTAGTAGGAAGGAAGATGATGAGAGTTGCAGTGAGTTTGAGGTGCTGATGTTTGGAGAGG
rJMFF019D24+ GTAGTAGGAAGGAAGATGATGAGAGTTGCAGTGAGTTTGAGGTTCTGATGTTTGGAGAGG
                      ____________________________________________________________
consensus GTAGTAGGAAGGAAGATGATGAGAGTTGCAGTGAGTTTGAGGTTCTGATGTTTGGAGAGG
 
. : . : . : . : . : . :
rJMSF043F17+ GAACTTCTAAGTCCAAATCTTATGGTGAA---GATGATGATAAGGAGGTGGGAGTAGGT-
rJMFF025K10+ GAACTTNTAAGTCCAAATNTTGTGGTGAAGATGATGATGATAAGGAGATGGGTGTAGGTG
rJMFF019D24+ GAACTTCTAAGTCCAAATCTTATGGTGAA---GATGATGATAAGGAGGTGGGAGTAGGT-
                      ____________________________________________________________
consensus GAACTTCTAAGTCCAAATCTTATGGTGAA---GATGATGATAAGGAGGTGGGAGTAGGT-
 
. : . : . : . : . : . :
rJMSF043F17+ --GAAGCACAGGAGACTAAAGTGAATGGAGGGAAGAAAATGACTGGTTTATCTTCTTTGA
rJMFF025K10+ AAGAAGCNCGGGAGACTAAAGTGAATGGAGGGAAGAAAATGACTGGTTTATNTTNTTTGA
rJMFF019D24+ --GAAGCACAGGAGACTAAAGTGAATGGAGGGAAGAAAATGACTGGTTTATCTTCTTTGA
                      ____________________________________________________________
consensus --GAAGCACAGGAGACTAAAGTGAATGGAGGGAAGAAAATGACTGGTTTATCTTCTTTGA
 
. : . : . : . : . : . :
rJMSF043F17+ TTGAAGAGAAGGCTTGAAG-TTTGGAGCTTTAATTCAATGGTCTCTGTGTTTTAGTATAC
rJMFF025K10+ TTGAAGAGAAGGCTTGAAGTTTTGGAGCTTCAATTCAATGG--TCTGTGTTTTAGTATAC
rJMFF019D24+ TTGAAGAGAAGGCTTGAAGTTTTGGAGCTTTAATTCAATGGTCTCTGTGTTTTAGTATAC
                      ____________________________________________________________
consensus TTGAAGAGAAGGCTTGAAGTTTTGGAGCTTTAATTCAATGGTCTCTGTGTTTTAGTATAC
 
. : . : . : . : . : . :
rJMSF043F17+ TAATAATA---TTTTTTTTCTTTGTTTTCTGCCCCTGGGTTTTGGTATTTGGGGCACTAT
rJMFF025K10+ TAACAATATATTTTTTTTTTCTTGTTTTCTGCCCCTGGGTTTTGGTATTTGGGGCACTAT
rJMFF019D24+ TAATAATA---TTTTTTTTCTTTGTTTTCTGCCCCTGGGTTTTGGTATTTGGGGCACTAT
                      ____________________________________________________________
consensus TAATAATA---TTTTTTTTCTTTGTTTTCTGCCCCTGGGTTTTGGTATTTGGGGCACTAT
 
. : . : . : . : . : . :
rJMSF043F17+ TGAATGCAGTCCAAGTATTATATGTCTTGGCCTAAGTATGTCTTGATCAAGTAATGCCCT
rJMFF025K10+ AGAACGCAGTCCAAGTATTATATGTCTTGGCCTAAGTATGTCTTGATCAAGTAATGCCCT
rJMFF019D24+ TGAATGCAGTCCAAGTATTATATGTCTTGGCCTAAGTATGTCTTGATCAAGTAATGCCCT
                      ____________________________________________________________
consensus TGAATGCAGTCCAAGTATTATATGTCTTGGCCTAAGTATGTCTTGATCAAGTAATGCCCT
 
. : . : . : . : . : . :
rJMSF043F17+ TCACCTTTTAATGTAAGGGTACTAAGTGTTAATGCAATACAATCACTAGTAGTAATAG
rJMFF025K10+ TCACCTTTTAATGTAAGGGTACTAAGTGTTAATGCAATACAATCACTAGTAGTAATAG
rJMFF019D24+ TCACCTTTTAATGTAAGGGTACTAAGTGTTAATGCAATACAATCACTAGTAGTAATAGTG
                      ____________________________________________________________
consensus TCACCTTTTAATGTAAGGGTACTAAGTGTTAATGCAATACAATCACTAGTAGTAATAGTG
 
. : . : . : . : . : . :
rJMFF019D24+ GCAGTAGTGAAGAATAGGGGTTGTGTAACTCTGACATTTTGGTGTGTGACCTCAATAATA
                      ____________________________________________________________
consensus GCAGTAGTGAAGAATAGGGGTTGTGTAACTCTGACATTTTGGTGTGTGACCTCAATAATA