Contig 012283:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF044K07-                GACCGCTTTCGCGTCCGCTTCACTTCTCATCTCAGACAGCAATGAACCCCTCCTC
                      ____________________________________________________________
consensus                  GACCGCTTTCGCGTCCGCTTCACTTCTCATCTCAGACAGCAATGAACCCCTCCTC
 
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JMSF044K07-           TGCACTCATCTTGAGCGCCGCCGCACTGGCTTTGCTCTCAGTCTTATTGGCTTTCAACTC
                      ____________________________________________________________
consensus             TGCACTCATCTTGAGCGCCGCCGCACTGGCTTTGCTCTCAGTCTTATTGGCTTTCAACTC
 
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JMSF044K07-           CCAGCTTCTCTTTACCCCACCCACCATCCCGGGCTCCCAAGACCTCCTCACCAACGCCGA
                      ____________________________________________________________
consensus             CCAGCTTCTCTTTACCCCACCCACCATCCCGGGCTCCCAAGACCTCCTCACCAACGCCGA
 
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JMSF044K07-           TATTCTCCCCGTCCCCGGCGCCCTTGGACCGGAAAGTCTTGCCTTTGACCCTAACGGAGA
                      ____________________________________________________________
consensus             TATTCTCCCCGTCCCCGGCGCCCTTGGACCGGAAAGTCTTGCCTTTGACCCTAACGGAGA
 
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JMSF044K07-           CGGGCCCTACACCGGAGTTGCCGACGGCCGGATTCTCAAGTGGGAGCCCGGTGCAGATGG
                      ____________________________________________________________
consensus             CGGGCCCTACACCGGAGTTGCCGACGGCCGGATTCTCAAGTGGGAGCCCGGTGCAGATGG
 
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JMSF044K07-           AATAAGTGGCGGCCGTTGGGTCGATTTTGCTGTCACCTCCTCTCAAAGGAAGGATTGTGT
                      ____________________________________________________________
consensus             AATAAGTGGCGGCCGTTGGGTCGATTTTGCTGTCACCTCCTCTCAAAGGAAGGATTGTGT
 
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JMSF044K07-           TCGGCCATTTGCTCCTGAAATGGAGCACATATGTGGAAGGCCACTGGGCTTGCGATTCGA
                      ____________________________________________________________
consensus             TCGGCCATTTGCTCCTGAAATGGAGCACATATGTGGAAGGCCACTGGGCTTGCGATTCGA
 
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JMSF044K07-           TAAGAAAACTGGAGATTTGTACGTTGCTGATGCCTACTTGGGCCTACATGTAGTGGGGCG
                      ____________________________________________________________
consensus             TAAGAAAACTGGAGATTTGTACGTTGCTGATGCCTACTTGGGCCTACATGTAGTGGGGCG
 
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JMSF044K07-           GACTGGAGGATCCTCCACACCACTGGTTAAAGAAGTTGATGGTCAATCTCTCCTCTTTAC
                      ____________________________________________________________
consensus             GACTGGAGGATCCTCCACACCACTGGTTAAAGAAGTTGATGGTCAATCTCTCCTCTTTAC
 
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JMSF044K07-           CAATGATATGGACATTGATGAGGATGAAGATGCCATTTATTTCACGGATACAAGCACCAA
                      ____________________________________________________________
consensus             CAATGATATGGACATTGATGAGGATGAAGATGCCATTTATTTCACGGATACAAGCACCAA
 
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JMSF044K07-           ATTTCAGCGGAGGCAATTTATTGCATCGGTTGTGAGTGGAGACAGGACAGGCAGACTGAT
rJMSF044K07+           TTTCAGCGGAGGCAATTTATTGCATCGGTTGTGAGTGGAGACAGGACAGGCAGACTGAT
JMFF017I21-              TCAGCGGAGGCAATTTATTGCATCGGTTGTGAGTGGAGACAGGACAGGCAGACTGAT
rJMFF017I21+             TCAGCGGAGGCAATTTATTGCATCGGTTGTGAGTGGAGACAGGACAGGCAGACTGAT
                      ____________________________________________________________
consensus             ATTTCAGCGGAGGCAATTTATTGCATCGGTTGTGAGTGGAGACAGGACAGGCAGACTGAT
 
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JMSF044K07-           GAAATACGACAGGTCAACGAAAGAAGTGACAGTTCTAATTCAAGGCATCGCTTTCGCCAA
rJMSF044K07+          GAAATACGACAGGTCAACGAAAGAAGTGACAGTTCTAATTCAAGGCATCGCTTTCGCCAA
JMFF017I21-           GAAATACGACAGGTCAACGAAAGAAGTGACAGTTCTAATTCAAGGCATCGCTTTCGCCAA
rJMFF017I21+          GAAATACGACAGGTCAACGAAAGAAGTGACAGTTCTAATTCAAGGCATCGCTTTCGCCAA
                      ____________________________________________________________
consensus             GAAATACGACAGGTCAACGAAAGAAGTGACAGTTCTAATTCAAGGCATCGCTTTCGCCAA
 
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JMSF044K07-           CGGTG                                                       
rJMSF044K07+          CGGTGTAGCGTTGAGCAAAGACGGGTCCTTTGTACTTGTAGCTGAAACTTCTACGGGTAG
JMFF017I21-           CGGTGTAGCGTTGAGCAAAGACGGGTCCTTTGTACTTGTAGCTGAAACTTCTACGGGTAG
rJMFF017I21+          CGGTGTAGCGTTGAGCAAAGACGGGTCCTTTGTACTTGTAGCTGAAACTTCTACGGGTAG
                      ____________________________________________________________
consensus             CGGTGTAGCGTTGAGCAAAGACGGGTCCTTTGTACTTGTAGCTGAAACTTCTACGGGTAG
 
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rJMSF044K07+          AGTGTTAAGATACTGGCTCAAAGGACCTGAAGCCGGGAACCACACTACTTTTGCTGTTGT
JMFF017I21-           AGTGTTAAGATACTGGCTCAAAGGACCTGAAGCCGGGAACCACACTACTTTTGCTGTTGT
rJMFF017I21+          AGTGTTAAGATACTGGCTCAAAGGACCTGAAGCCGGGAACCACACTACTTTTGCTGTTGT
                      ____________________________________________________________
consensus             AGTGTTAAGATACTGGCTCAAAGGACCTGAAGCCGGGAACCACACTACTTTTGCTGTTGT
 
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rJMSF044K07+          ACCGGGATTTCCAGACAACATTAGGAGGAACTCGAGAGGGCAATTCTGGGTCGCTTTACA
JMFF017I21-           ACCGGGATTTCCAGACAACATTAGGAGGAACTCGAGAGGGCAATTCTGGGTCGCTTTACA
rJMFF017I21+          ACCGGGATTTCCAGACAACATTAGGAGGAACTCGAGAGGGCAATTCTGGGTCGCTTTACA
                      ____________________________________________________________
consensus             ACCGGGATTTCCAGACAACATTAGGAGGAACTCGAGAGGGCAATTCTGGGTCGCTTTACA
 
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rJMSF044K07+          CGCCAAAAAAGGGGTTCTCGCTCACTTGCTCGTGTCTAATCCGTGGCTCGGAAAGACGTT
JMFF017I21-           CGCCAAAAAAGGGGTTCTCGCTCACTTGCTCGTGTCTAATCCGTGGCTCGGAAAGACGTT
rJMFF017I21+          CGCCAAAAAAGGGGTTCTCGCTCACTTGCTCGTGTCTAATCCGTGGCTCGGAAAGACGTT
                      ____________________________________________________________
consensus             CGCCAAAAAAGGGGTTCTCGCTCACTTGCTCGTGTCTAATCCGTGGCTCGGAAAGACGTT
 
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rJMSF044K07+          GTTAAAGCTCCCGTTCAACTTCAAGCAACTGCACCACTTGCTAGTGGGGAAGCCTCATGC
JMFF017I21-           GTTAAAGCTCCCGTTCAACTTCAAGCAACTGCACCACTTGCTAGTGGGGAAGCCTCATGC
rJMFF017I21+          GTTAAAGCTCCCGTTCAACTTCAAGCAACTGCACCACTTGCTAGTGGGGAAGCCTCATGC
                      ____________________________________________________________
consensus             GTTAAAGCTCCCGTTCAACTTCAAGCAACTGCACCACTTGCTAGTGGGGAAGCCTCATGC
 
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rJMSF044K07+          ATCTGCAATCAAGCTCGGGGAAGATGGGGAAGTCGTGGAGGTTTTGGAGGACATTGAAGG
JMFF017I21-           ATCTGCAATCAAGCTCGGGGAAGATGGGGAAGTCGTGGAGGTTTTGGAGGACATTGAAGG
rJMFF017I21+          ATCTGCAATCAAGCTCGGGGAAGATGGGGAAGTCGTGGAGGTTTTGGAGGACATTGAAGG
                      ____________________________________________________________
consensus             ATCTGCAATCAAGCTCGGGGAAGATGGGGAAGTCGTGGAGGTTTTGGAGGACATTGAAGG
 
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rJMSF044K07+          CAAGAGCTTGAAGTTCATAAGTGAAGTTGAGGAGCATGAGGGGAAGTTGTGGATTGGATC
JMFF017I21-           CAAGAGCTTGAAGTTCATAAGTGAAGTTGAGGAGCATGAGGGGAAGTTGTGGATTGGATC
rJMFF017I21+          CAAGAGCTTGAAGTTCATAAGTGAAGTTGAGGAGCATGAGGGGAAGTTGTGGATTGGATC
                      ____________________________________________________________
consensus             CAAGAGCTTGAAGTTCATAAGTGAAGTTGAGGAGCATGAGGGGAAGTTGTGGATTGGATC
 
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rJMSF044K07+          TGTATTGATGCCTTTTCTTGGAGTTTATAAACTGCCTTGACGTTCTGTACATCTTAGTAG
JMFF017I21-           TGTATTGATGCCTTTTCTTGGAGTT                                   
rJMFF017I21+          TGTATTGATGCCTTTTCTTGGAGTTTATAAACTGCCTTGAAGTTCTGTACATCTTAGTAG
                      ____________________________________________________________
consensus             TGTATTGATGCCTTTTCTTGGAGTTTATAAACTGCCTTGACGTTCTGTACATCTTAGTAG
 
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rJMSF044K07+          ACAAGAACATGGGCGAAAAGCAGCCCAACAGCATAGTTAATAAGACGAGAGTGATTAAAC
rJMFF017I21+          ACAAGAACATGGGCGAAAAGCAGCCCAACAACATAGTTAATAAGACGAGAGTGATTAAAC
                      ____________________________________________________________
consensus             ACAAGAACATGGGCGAAAAGCAGCCCAACAGCATAGTTAATAAGACGAGAGTGATTAAAC
 
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rJMSF044K07+          ATAGGTTGTCGGTCTCGTACCAAGGTGGCTTTTGAATCCATCATGTTAAATCT       
rJMFF017I21+          ATAGGTTGTCGGTCTCGTACCAAGGTGGCTTTTGAATCCATCATGTTAAATCTTTCATGT
                      ____________________________________________________________
consensus             ATAGGTTGTCGGTCTCGTACCAAGGTGGCTTTTGAATCCATCATGTTAAATCTTTCATGT
 
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rJMFF017I21+          TCAGAAAATATAAGTAATATTTTCATGCTAAATAAGACCTTTTCTGTCTGTTAGGGAAAA
                      ____________________________________________________________
consensus             TCAGAAAATATAAGTAATATTTTCATGCTAAATAAGACCTTTTCTGTCTGTTAGGGAAAA