| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002N13 | Sequence | 571 | 004470 (9) | ref|XP_009802382.1| | 3e-77 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 691 | 012282 (9) | ref|XP_009802382.1| | 5e-94 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
| JMFF007C03 | Sequence | 535 | 004470 (9) | ref|XP_009802382.1| | 1e-58 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 778 | 012282 (9) | ref|XP_009802382.1| | 5e-83 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
| JMFF017H08 | Sequence | 556 | 004470 (9) | ref|XP_009802382.1| | 3e-77 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 711 | 012282 (9) | ref|XP_009802382.1| | 3e-84 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
| JMFF023O15 | Sequence | 539 | 004470 (9) | ref|XP_009802382.1| | 5e-79 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 666 | 012282 (9) | ref|XP_009802382.1| | 1e-81 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
| JMFF028N19 | Sequence | 564 | 004470 (9) | ref|XP_009802382.1| | 6e-76 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 658 | 012282 (9) | ref|XP_009802382.1| | 9e-84 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
| JMFF033H03 | Sequence | 559 | 004470 (9) | ref|XP_009802382.1| | 3e-77 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 754 | 012282 (9) | ref|XP_009802382.1| | 7e-96 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
| JMFN020N09 | Sequence | 599 | 012282 (9) | ref|XP_009802382.1| | 2e-81 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | |||||
| JMSF009E16 | Sequence | 252 | 004470 (9) | ref|XP_009802382.1| | 4e-10 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 774 | 012282 (9) | ref|XP_009802382.1| | 1e-90 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
| JMSF021G21 | Sequence | 606 | 004470 (9) | ref|XP_009802382.1| | 8e-104 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 752 | 012282 (9) | ref|XP_009802382.1| | 1e-92 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF033H03+ CTAATCAAATA
____________________________________________________________
consensus CTAATCAAATA
. : . : . : . : . : . :
rJMFF033H03+ TTGTGATCCGTATTCAGCTGAACATCCTCCGATTGAATGTGAGGGAGCTCTGGCACTTGC
rJMFF002N13+ GCACTTGC
rJMFF007C03+ TGTGAGGGAGCTCTGGCACTTGC
rJMSF021G21+ C
rJMSF009E16+ TGTGAGGGAGCTCTGGCACTTGC
____________________________________________________________
consensus TTGTGATCCGTATTCAGCTGAACATCCTCCGATTGAATGTGAGGGAGCTCTGGCACTTGC
. : . : . : . : . : . :
rJMFF033H03+ AGAAGAGGAGCAGGGAGATATTGATGCTTATAGTATATACACTCCTGTCTGCACTAAAAC
rJMFF002N13+ AGAAGAGGAGCAGGGAGATATTGATGCTTATAGTATATACACTCCTGTCTGCACTAAAAC
rJMFF007C03+ AGAAGAGGAGCAGGGAGATATTGATGCTTATAGTATATACACTCCTGTCTGCACTAAAAC
rJMSF021G21+ AGAAGAGGAGCAGGGAGATATTGATGCTTATAGTATATACACTCCTGTCTGCACTAAAAC
rJMSF009E16+ AGAAGAGGAGCAGGGAGATATTGATGCTTATAGTATATACACTCCTGTCTGCACTAAAAC
____________________________________________________________
consensus AGAAGAGGAGCAGGGAGATATTGATGCTTATAGTATATACACTCCTGTCTGCACTAAAAC
. : . : . : . : . : . :
rJMFF033H03+ TTCTTCATC-TTCATCTCCTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
rJMFF002N13+ TTCTTCATC-TTCATCTCCTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
rJMFF007C03+ TTCTTCATCTTTCATCTCCTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
rJMFF023O15+ GGGGTCACTATCCATGGATGTCCAGAG
rJMFF028N19+ CTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
JMFN020N09- TTCTTCATC-TTCATCTCCTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
rJMSF021G21+ TTCTTCATC-TTCATCTCCTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
rJMSF009E16+ TTCTTCATC-TTCATCTCCTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
rJMFF017H08+ C-TTCATCTCCTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
____________________________________________________________
consensus TTCTTCATC-TTCATCTCCTCGGTTCAAACTAAGGGGTCACTATCCATGGATGTCCAGAG
. : . : . : . : . : . :
rJMFF033H03+ CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
rJMFF002N13+ CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
rJMFF007C03+ CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
rJMFF023O15+ CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
rJMFF028N19+ CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
JMFN020N09- CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGCAAGTGCAGA
rJMSF021G21+ CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
rJMSF009E16+ CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
rJMFF017H08+ CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
____________________________________________________________
consensus CATATGATCCATGCACTGCCAACTATGCACAAGTTTACTTCAATCTACCGGAAGTGCAGA
. : . : . : . : . : . :
rJMFF033H03+ AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
rJMFF002N13+ AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
rJMFF007C03+ AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
rJMFF023O15+ AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
rJMFF028N19+ AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
JMFN020N09- AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
rJMSF021G21+ AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
rJMSF009E16+ AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
rJMFF017H08+ AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
____________________________________________________________
consensus AGGCATTTCATGCCAATGTGACTGGAATCCCCTATCCTTGGGATACATGCAATTATGATG
. : . : . : . : . : . :
rJMFF033H03+ TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
rJMFF002N13+ TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
rJMFF007C03+ TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
rJMFF023O15+ TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
rJMFF028N19+ TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
JMFN020N09- TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
rJMSF021G21+ TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
rJMSF009E16+ TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
rJMFF017H08+ TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
____________________________________________________________
consensus TTAATGGCAACTGGGGAGATGCTCCTGTGTCAATGCTGCCTATTTATCAAGAACTCATCG
. : . : . : . : . : . :
rJMFF033H03+ ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
rJMFF002N13+ ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
rJMFF007C03+ ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
rJMFF023O15+ ATGCTGGTCTCAGGATATGGGTTTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
rJMFF028N19+ ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
JMFN020N09- ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
rJMSF021G21+ ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
rJMSF009E16+ ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
rJMFF017H08+ ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
____________________________________________________________
consensus ATGCTGGTCTCAGGATATGGGTGTTCAGTGGGGATACCGATTCAGTGGTTCCACTAACTG
. : . : . : . : . : . :
rJMFF033H03+ CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
rJMFF002N13+ CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
rJMFF007C03+ CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
rJMFF023O15+ CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
rJMFF028N19+ CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
JMFN020N09- CATCCCAGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACAGGTACCCTTGGT
rJMSF021G21+ CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
rJMSF009E16+ CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
rJMFF017H08+ CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
____________________________________________________________
consensus CATCCCGGCGTTCCATTAACGCATTGAAGCTTCCAACCAAGAAAAACTGGTACCCTTGGT
. : . : . : . : . : . :
rJMFF033H03+ ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
rJMFF002N13+ ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAACATATGAAGGGTTGAGCCTTGTGAGTA
rJMFF007C03+ ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
rJMFF023O15+ ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
rJMFF028N19+ ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
JMFN020N09- ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
rJMSF021G21+ ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
rJMSF009E16+ ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
rJMFF017H08+ ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
____________________________________________________________
consensus ATGACAATGGAAAGGTTGGTGGGTGGAGCCAAATATATGAAGGGTTGAGCCTTGTGAGTA
. : . : . : . : . : . :
rJMFF033H03+ TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
rJMFF002N13+ TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
rJMFF007C03+ TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTTTGATCA
rJMFF023O15+ TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
rJMFF028N19+ TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
JMFN020N09- TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
rJMSF021G21+ TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
rJMSF009E16+ TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
rJMFF017H08+ TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
____________________________________________________________
consensus TACTGGGAGCAGGGCATGAGGTGCCATTAACAAGGCCTCAACATGCTTTGACTCTGATCA
. : . : . : . : . : . :
rJMFF033H03+ AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
rJMFF002N13+ AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
rJMFF007C03+ AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
rJMFF023O15+ AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
rJMFF028N19+ AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
JMFN020N09- AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTTGTTATT
rJMSF021G21+ AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
rJMSF009E16+ AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
rJMFF017H08+ AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
____________________________________________________________
consensus AATCATATCTGGAGAACAAGCCAATGCCAACTTTGTCAGAAACTCTCAAGTCTAGTTATT
. : . : . : . : . : . :
rJMFF033H03+ AAAGAATTGAGAATTGAAGGTGTTCAACATATATAATATAATGTATAAATAAATGTGCTG
rJMFF002N13+ AAAGAATTGAGAATTGAAGGTGTTCAACATATATAATATAATGTATAAATAAATGTGCTG
rJMFF007C03+ AAAGAATTGAGAATTGAAGGTGTTCAATATATATAATATAATGTATAAATAAATGTGCTG
rJMFF023O15+ AGAGAATTGAGAATTGAAGGTGTTCAACATATATAATATAATGTATAAATAAATGTGCTG
rJMFF028N19+ AAAGAATTGAGAATTGAAGGTGTTCAACATATATAATATAATGTATAAATAAATGTGCTG
JMFN020N09- AAAGAATTGAGACTTGAAGGTGTTCACCATATATAATATA
rJMSF021G21+ AAAGAATTGAGAATTGAAGGTGTTCAACATATATAATATAATGTATAAATAAATGTGCTG
rJMSF009E16+ AAAGAATTGAGAATTGAAGGTGTTTAACATATATAATATAATGTATAAATAAATGTGCTG
rJMFF017H08+ AAAGAATTGAGAATTGAAGGTGTTCAACATATATAATATAATGTATAAATAAATGTGCTG
____________________________________________________________
consensus AAAGAATTGAGAATTGAAGGTGTTCAACATATATAATATAATGTATAAATAAATGTGCTG
. : . : . : . : . : . :
rJMFF033H03+ TCCAATCCAACTATCAACTAAACT
rJMFF002N13+ TCCAATCCAACTATCAACTAAACT
rJMFF007C03+ TCCAATCCAACTATCAACTAAACTTTTAGTTGAGATGTTTTAATTTGGCATCAGAGCATC
rJMFF023O15+ TCCAATCCAACTATCAACTAAACTTTTAGTTGAGATGTTTTAATTTGGCATCAGAGCATC
rJMFF028N19+ TCCAATCCAACTATCAACTAAACTTTTAGTTGAGATGTTTTAATTTGGCATCAGAGCATC
rJMSF021G21+ TCCAATCCAACTATCAACTAAACTTTTAGTTGAGATGTTTTAATTTGGCATCAGAGCATC
rJMSF009E16+ TCCAATCCAACTATCAACTAAACTTTTAGTTGAGATGTTTTAATTTGGCATCAGAGCATC
rJMFF017H08+ TCCAATCCAACTATCAACTAAACTTTTAGTTGAGATGTTTTAATTTGGCATCAGAGCATC
____________________________________________________________
consensus TCCAATCCAACTATCAACTAAACTTTTAGTTGAGATGTTTTAATTTGGCATCAGAGCATC
. : . : . : . : . : . :
rJMFF007C03+ TCTTGTAAAAGTTGCGAT
rJMFF023O15+ TCTTGTAAAAGTTGCGATTGAAATAATAAGTT
rJMFF028N19+ TCT
rJMSF021G21+ TCTTGTAAAAGTTGCGATTGAAATAATAAGTT
rJMSF009E16+ TCTTGTAAAAGTTGCGATTGAAATAATAAGTT
rJMFF017H08+ TCTTGTAAAAGTTGCGATTGAAATAATAAGTTGTATTTTAAAATAAAATAAAATAAAAAA
____________________________________________________________
consensus TCTTGTAAAAGTTGCGATTGAAATAATAAGTTGTATTTTAAAATAAAATAAAATAAAAAA