Contig 012281:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017G13Sequence569010235 (2)ref|XP_009769175.1|129PREDICTED: uncharacterized protein LOC104220068 [Nicotiana sylvestris] ref|XP_00670012281 (2)ref|XP_009617258.1|5e-35PREDICTED: uncharacterized protein LOC104109602 isoform X2 [Nicotiana tomentosi
JMFF026D01Sequence521010235 (2)ref|XP_009769175.1|125PREDICTED: uncharacterized protein LOC104220068 [Nicotiana sylvestris] ref|XP_00699012281 (2)ref|XP_009769175.1|167PREDICTED: uncharacterized protein LOC104220068 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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rJMFF026D01+                                               TATTCTTGATGAGATGCGCCAAG
                      ____________________________________________________________
consensus                                                  TATTCTTGATGAGATGCGCCAAG
 
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rJMFF026D01+          CTCTTGAAGTACGACTAGATGCTGCCGAGAGAGAGAGGGAAGCTGCTGAACAAGACAAGT
rJMFF017G13+                                                            CAAGACAAGT
                      ____________________________________________________________
consensus             CTCTTGAAGTACGACTAGATGCTGCCGAGAGAGAGAGGGAAGCTGCTGAACAAGACAAGT
 
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rJMFF026D01+          TGCAAAAGGAAGAGCTTGCACGGAAAGCACT-GGTTGAGCAAGAACTCATTATGGAGAAA
rJMFF017G13+          TGCAAAAGGAAGAGCTTGCACGGAAAGCACTNGGTTGAGCAAGAACTCATTATGGAGAAA
                      ____________________________________________________________
consensus             TGCAAAAGGAAGAGCTTGCACGGAAAGCACTNGGTTGAGCAAGAACTCATTATGGAGAAA
 
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rJMFF026D01+          GTTGTGCAAGATTCAAACATTTTGAAGCGAGAGGCAGAAGAAAATGCCAAGTTACAGGAG
rJMFF017G13+          GTGGTGCAAGATTCAAACATTTTGAGGCGAGAGGCAGAAGAAAATGCCAAGTTACAGGAG
                      ____________________________________________________________
consensus             GTTGTGCAAGATTCAAACATTTTGAGGCGAGAGGCAGAAGAAAATGCCAAGTTACAGGAG
 
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rJMFF026D01+          TTCCTTGTTGATCGTGGACGCATTGTAGATATGTTGCAAGGAGAGATATCAGTGATATGT
rJMFF017G13+          TTCCTTGTTGATCGTGGACGCATTGTAGATATGTTGCAAGGAGAGATATCAGTGATATGT
                      ____________________________________________________________
consensus             TTCCTTGTTGATCGTGGACGCATTGTAGATATGTTGCAAGGAGAGATATCAGTGATATGT
 
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rJMFF026D01+          CAAGATGTGAGGTTACTAAAAGAGAAGTTTGATGATCGCGTTCCACTCAGCAAATCGCTT
rJMFF017G13+          CAAGATGTGAGGTTACTAAAAGAGAAGTTTGATGATCGCGTTCCACTCAGCAAATCGCTT
                      ____________________________________________________________
consensus             CAAGATGTGAGGTTACTAAAAGAGAAGTTTGATGATCGCGTTCCACTCAGCAAATCGCTT
 
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rJMFF026D01+          TCTTCCAGTCAGACAAGCTGCATTTTAGCATCTTCAAGCTCATCCTCGAAAAGTCTGGTA
rJMFF017G13+          TCTTCCAGTCAGACAAGCTGCATTTTAGCATCTTCAAGCTCATCCTCGAAAAGTCTGGTA
                      ____________________________________________________________
consensus             TCTTCCAGTCAGACAAGCTGCATTTTAGCATCTTCAAGCTCATCCTCGAAAAGTCTGGTA
 
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rJMFF026D01+          CCTGATTCGGACCAAGTAGCTGCTGAGCAAACAAATTTGTCAGGACAGCAGAAGATGGAC
rJMFF017G13+          CCTGCGTCGGACCAAGTAGCTGCTGAGCAAACAAATTTGTCAGGACAGCAGAAGATGGAC
                      ____________________________________________________________
consensus             CCTGCTTCGGACCAAGTAGCTGCTGAGCAAACAAATTTGTCAGGACAGCAGAAGATGGAC
 
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rJMFF026D01+          AGCACATCTGCAGCAGCAGAGGAAACCAGAAATAATTGTAAAGCTGCTCTTCTGGAGGAT
rJMFF017G13+          AGCACATCTGCAGCAGCAGAGGAAACCAGAAATAATTGTAAAGCTGCTCTTCTGGAGGAT
                      ____________________________________________________________
consensus             AGCACATCTGCAGCAGCAGAGGAAACCAGAAATAATTGTAAAGCTGCTCTTCTGGAGGAT
 
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rJMFF026D01+          GGATGGGAAATTTTTGACAACCGTGACTTGTGCATGTGAAGGAAATGGTGCTTAGAATTG
rJMFF017G13+          GGATGGGAAATTTTTGACAACCGTGACTTGTGCATGTGAAGGAAATGGTGCTTAGAATTG
                      ____________________________________________________________
consensus             GGATGGGAAATTTTTGACAACCGTGACTTGTGCATGTGAAGGAAATGGTGCTTAGAATTG
 
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rJMFF026D01+          AGACGACAGCTCTGTCAAATTATAATAGCCTTTTTGCTTGCATTTTATCTTAAGTTCCCA
rJMFF017G13+          AGACGACAGCTCTGTCAAATTATAATAGCCTTTTTGCTTGCATTTTATCTTAAGTTCCCA
                      ____________________________________________________________
consensus             AGACGACAGCTCTGTCAAATTATAATAGCCTTTTTGCTTGCATTTTATCTTAAGTTCCCA
 
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rJMFF026D01+          CTCCCCCCTTTTCTGCTAAATAGCTTTATTTTGGTTACATCCATTCTTGGTCAGCTAAAC
rJMFF017G13+          CTCCCCCCTTTTCTGCTAAATAGCTTTATTTTGGTTACATCCATTCTTGGTCAGCTAAAC
                      ____________________________________________________________
consensus             CTCCCCCCTTTTCTGCTAAATAGCTTTATTTTGGTTACATCCATTCTTGGTCAGCTAAAC
 
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rJMFF026D01+          TCTGAGTTTGTTTGAGC                                           
rJMFF017G13+          TCTGAGTTTGTTTGAGCCCATGCCATGGAGTTTTGGAGGTGTTAATGATAAATAAAGTAG
                      ____________________________________________________________
consensus             TCTGAGTTTGTTTGAGCCCATGCCATGGAGTTTTGGAGGTGTTAATGATAAATAAAGTAG