Contig 012279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017E13Sequence561004775 (4)334012279 (2)
JMSF039O03Sequence700004775 (4)ref|XP_006344633.1|1e-05PREDICTED: sucrose nonfermenting 4-like protein-like [Solanum tuberosum]619012279 (2)ref|XP_009588179.1|86.3PREDICTED: sucrose nonfermenting 4-like protein [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF039O03+                                        TGNTAANGNCTCTTTGCCGGANATATACNG
                      ____________________________________________________________
consensus                                           TGNTAANGNCTCTTTGCCGGANATATACNG
 
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rJMSF039O03+          TCGAAGNGATATCNCTGCTTTGGCNAAAGATAGGGNTTATGCNCNAATTCNTNTTGATGA
                      ____________________________________________________________
consensus             TCGAAGNGATATCNCTGCTTTGGCNAAAGATAGGGNTTATGCNCNAATTCNTNTTGATGA
 
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rJMSF039O03+          ANTGNGTATTCCCCCGGCGTTACAANTGNGNCNAGNCGCTAGTTNTTCAAANGAACTTTT
                      ____________________________________________________________
consensus             ANTGNGTATTCCCCCGGCGTTACAANTGNGNCNAGNCGCTAGTTNTTCAAANGAACTTTT
 
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rJMSF039O03+          CNANGGNCNGNGANGTCNGANGNGTNTGAGGTTTGATCCNTTGCCCAAAGNGANGGNACG
                      ____________________________________________________________
consensus             CNANGGNCNGNGANGTCNGANGNGTNTGAGGTTTGATCCNTTGCCCAAAGNGANGGNACG
 
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rJMSF039O03+          GTTATNTGTTCCNGGGGNTNGAAGNGNTGTCNTAGTGGNGGCNGGCNGCNAGCGTGTAGA
                      ____________________________________________________________
consensus             GTTATNTGTTCCNGGGGNTNGAAGNGNTGTCNTAGTGGNGGCNGGCNGCNAGCGTGTAGA
 
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rJMSF039O03+          AGGGATCNTTTCNTTGAGCGNCGNGTTCNGATTTTTGCTTGGNTGAAANAGNGGNGGCNT
                      ____________________________________________________________
consensus             AGGGATCNTTTCNTTGAGCGNCGNGTTCNGATTTTTGCTTGGNTGAAANAGNGGNGGCNT
 
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rJMSF039O03+          TTNTCCTCNTNTNTCCCCCNAANGAAGNGCNGCNTTNNTGAAGTTNTTTNTCNNGAATCN
                      ____________________________________________________________
consensus             TTNTCCTCNTNTNTCCCCCNAANGAAGNGCNGCNTTNNTGAAGTTNTTTNTCNNGAATCN
 
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rJMSF039O03+          ATTCCNTTTAGNATCTTTTCNGCNANGCCCGTTCCNCGNTGCNNTTGNGGNTGGTNTTNT
                      ____________________________________________________________
consensus             ATTCCNTTTAGNATCTTTTCNGCNANGCCCGTTCCNCGNTGCNNTTGNGGNTGGTNTTNT
 
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rJMSF039O03+          AANTCCCTTGTNTTTGATANGNCNGGNTCNTACTTNTTAGCCNTGNGCTTTTTTAGGGGG
rJMFF017E13+                                                          TTTTTTAGGNGG
                      ____________________________________________________________
consensus             AANTCCCTTGTNTTTGATANGNCNGGNTCNTACTTNTTAGCCNTGNGCTTTTTTAGGGGG
 
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rJMSF039O03+          CGATCCCTAAGGAAAGACGNGTTTGTAAATTAAGNGGNTCNTAAAAAAAAAAAGAAAGAA
rJMFF017E13+          NGATCCATAAGGAAANACGNGTTTGTAAATTAAGAGGATCATAAAAAAAAAAAGAAAGAA
                      ____________________________________________________________
consensus             CGATCCCTAAGGAAAGACGNGTTTGTAAATTAAGAGGATCATAAAAAAAAAAAGAAAGAA
 
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rJMSF039O03+          TTATGACAAACTAATTATATCTACTGTGGACTGCGGATCAAAAAT               
rJMFF017E13+          TTATGACAAACTAATTATATCTACTGTGGACTGCGGATCAAAAATTCAAAAGAAAAGAAA
                      ____________________________________________________________
consensus             TTATGACAAACTAATTATATCTACTGTGGACTGCGGATCAAAAATTCAAAAGAAAAGAAA