Contig 012279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017E13Sequence561004775 (4)334012279 (2)
JMSF039O03Sequence700004775 (4)ref|XP_006344633.1|1e-05PREDICTED: sucrose nonfermenting 4-like protein-like [Solanum tuberosum]619012279 (2)ref|XP_009588179.1|86.3PREDICTED: sucrose nonfermenting 4-like protein [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039O03+ TGNTAANGNCTCTTTGCCGGANATATACNG
                      ____________________________________________________________
consensus TGNTAANGNCTCTTTGCCGGANATATACNG
 
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rJMSF039O03+ TCGAAGNGATATCNCTGCTTTGGCNAAAGATAGGGNTTATGCNCNAATTCNTNTTGATGA
                      ____________________________________________________________
consensus TCGAAGNGATATCNCTGCTTTGGCNAAAGATAGGGNTTATGCNCNAATTCNTNTTGATGA
 
. : . : . : . : . : . :
rJMSF039O03+ ANTGNGTATTCCCCCGGCGTTACAANTGNGNCNAGNCGCTAGTTNTTCAAANGAACTTTT
                      ____________________________________________________________
consensus ANTGNGTATTCCCCCGGCGTTACAANTGNGNCNAGNCGCTAGTTNTTCAAANGAACTTTT
 
. : . : . : . : . : . :
rJMSF039O03+ CNANGGNCNGNGANGTCNGANGNGTNTGAGGTTTGATCCNTTGCCCAAAGNGANGGNACG
                      ____________________________________________________________
consensus CNANGGNCNGNGANGTCNGANGNGTNTGAGGTTTGATCCNTTGCCCAAAGNGANGGNACG
 
. : . : . : . : . : . :
rJMSF039O03+ GTTATNTGTTCCNGGGGNTNGAAGNGNTGTCNTAGTGGNGGCNGGCNGCNAGCGTGTAGA
                      ____________________________________________________________
consensus GTTATNTGTTCCNGGGGNTNGAAGNGNTGTCNTAGTGGNGGCNGGCNGCNAGCGTGTAGA
 
. : . : . : . : . : . :
rJMSF039O03+ AGGGATCNTTTCNTTGAGCGNCGNGTTCNGATTTTTGCTTGGNTGAAANAGNGGNGGCNT
                      ____________________________________________________________
consensus AGGGATCNTTTCNTTGAGCGNCGNGTTCNGATTTTTGCTTGGNTGAAANAGNGGNGGCNT
 
. : . : . : . : . : . :
rJMSF039O03+ TTNTCCTCNTNTNTCCCCCNAANGAAGNGCNGCNTTNNTGAAGTTNTTTNTCNNGAATCN
                      ____________________________________________________________
consensus TTNTCCTCNTNTNTCCCCCNAANGAAGNGCNGCNTTNNTGAAGTTNTTTNTCNNGAATCN
 
. : . : . : . : . : . :
rJMSF039O03+ ATTCCNTTTAGNATCTTTTCNGCNANGCCCGTTCCNCGNTGCNNTTGNGGNTGGTNTTNT
                      ____________________________________________________________
consensus ATTCCNTTTAGNATCTTTTCNGCNANGCCCGTTCCNCGNTGCNNTTGNGGNTGGTNTTNT
 
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rJMSF039O03+ AANTCCCTTGTNTTTGATANGNCNGGNTCNTACTTNTTAGCCNTGNGCTTTTTTAGGGGG
rJMFF017E13+ TTTTTTAGGNGG
                      ____________________________________________________________
consensus AANTCCCTTGTNTTTGATANGNCNGGNTCNTACTTNTTAGCCNTGNGCTTTTTTAGGGGG
 
. : . : . : . : . : . :
rJMSF039O03+ CGATCCCTAAGGAAAGACGNGTTTGTAAATTAAGNGGNTCNTAAAAAAAAAAAGAAAGAA
rJMFF017E13+ NGATCCATAAGGAAANACGNGTTTGTAAATTAAGAGGATCATAAAAAAAAAAAGAAAGAA
                      ____________________________________________________________
consensus CGATCCCTAAGGAAAGACGNGTTTGTAAATTAAGAGGATCATAAAAAAAAAAAGAAAGAA
 
. : . : . : . : . : . :
rJMSF039O03+ TTATGACAAACTAATTATATCTACTGTGGACTGCGGATCAAAAAT
rJMFF017E13+ TTATGACAAACTAATTATATCTACTGTGGACTGCGGATCAAAAATTCAAAAGAAAAGAAA
                      ____________________________________________________________
consensus TTATGACAAACTAATTATATCTACTGTGGACTGCGGATCAAAAATTCAAAAGAAAAGAAA