| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001C12 | Sequence | 519 | 008702 (4) | ref|XP_011091529.1| | 139 | PREDICTED: uncharacterized protein LOC105171946 [Sesamum indicum] ref|XP_0110915 | 711 | 012273 (4) | ref|XP_006339473.1| | 3e-72 | PREDICTED: U-box domain-containing protein 12-like isoform X2 [Solanum tuberosu |
| JMFF016A11 | Sequence | 601 | 008702 (4) | ref|XP_011091529.1| | 187 | PREDICTED: uncharacterized protein LOC105171946 [Sesamum indicum] ref|XP_0110915 | 710 | 012273 (4) | ref|XP_006339473.1| | 3e-72 | PREDICTED: U-box domain-containing protein 12-like isoform X2 [Solanum tuberosu |
| JMFF044K13 | Sequence | 646 | 008702 (4) | ref|XP_011091529.1| | 283 | PREDICTED: uncharacterized protein LOC105171946 [Sesamum indicum] ref|XP_0110915 | 557 | 012273 (4) | ref|XP_006339473.1| | 2e-60 | PREDICTED: U-box domain-containing protein 12-like isoform X2 [Solanum tuberosu |
| JMFN034I06 | Sequence | 279 | 012273 (4) | emb|CBI38775.3| | 2e-31 | unnamed protein product [Vitis vinifera] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF001C12+ ATGTCGCCATGGATTCCCTGGTTTCTCTGGGAATCATTCCGAGACTAGTTCAC
rJMFF016A11+ GTCGCCATGGATTCCCTGGTTTCTCTGGGAATCATTCCGAGACTAGTTCAC
____________________________________________________________
consensus ATGTCGCCATGGATTCCCTGGTTTCTCTGGGAATCATTCCGAGACTAGTTCAC
. : . : . : . : . : . :
rJMFF044K13+ CCGCAGCTTCAGCTATATGCAAAAT
rJMFF001C12+ GTCCTGAAATCCGGCTCCATTGGAGCCCAACAGGCCCGCAGCTTCAGCTATATGCAAAAT
rJMFF016A11+ GTCCTGAAATCCGGCTCCATTGGAGCCCAACAGGCCCGCAGCTTCAGCTATATGCAAAAT
____________________________________________________________
consensus GTCCTGAAATCCGGCTCCATTGGAGCCCAACAGGCCCGCAGCTTCAGCTATATGCAAAAT
. : . : . : . : . : . :
rJMFF044K13+ CTGCACTTCCACCGAAGCGAAATCCATCGTAGGCGAAGCAGGATGCATCCCTCTTCTGGT
rJMFF001C12+ CTGCACTTCCACCGAAGCGAAATCCATCGTAGGCGAAGCAGGATGCATCCCTCTTCTGGT
rJMFF016A11+ CTGCACTTCCACCGAAGCGAAATCCATCGTAGGCGAAGCAGGATGCATCCCTCTTCTGGT
____________________________________________________________
consensus CTGCACTTCCACCGAAGCGAAATCCATCGTAGGCGAAGCAGGATGCATCCCTCTTCTGGT
. : . : . : . : . : . :
rJMFF044K13+ GAAATTGCTCGAGGCGAAAGCGAATAGCGCAAGAGAAGTTGCAGCGCAAGCCATTGCTAG
rJMFF001C12+ GAAATTGCTCGAGGCGAAAGCGAATAGCGCAAGAGAAGTTGCAGCGCAAGCCATTGCTAG
rJMFF016A11+ GAAATTGCTCGAGGCGAAAGCGAATAGCGCAAGAGAAGTTGCAGCGCAAGCCATTGCTAG
____________________________________________________________
consensus GAAATTGCTCGAGGCGAAAGCGAATAGCGCAAGAGAAGTTGCAGCGCAAGCCATTGCTAG
. : . : . : . : . : . :
rJMFF044K13+ CCTGATGAGTGTTGCGCATAATTGCAGGGAGATTAAGAAGATGGATAAGAGTGTGCCGAA
rJMFF001C12+ CCTGATGAGTGTTGCGCATAATTGCAGGGAGATTAAGAAGATGGATAAGAGTGTGCCGAA
rJMFF016A11+ CCTGATGAGTGTTGCGCATAATTGCAGGGAGATTAAGAAGATGGATAAGAGTGTGCCGAA
____________________________________________________________
consensus CCTGATGAGTGTTGCGCATAATTGCAGGGAGATTAAGAAGATGGATAAGAGTGTGCCGAA
. : . : . : . : . : . :
rJMFF044K13+ TTTGGTTCAATTATTGGAGCCGAGCCCGCAAAACACAGCCAAAAAGTATGCAGTTTCGTG
JMFN034I06- TTGGAGCCGAGCCCGCAAAACACAGCCAAAAAGTATGCAGTTTCGTG
rJMFF001C12+ TTTGGTTCAATTATTGGAGCCGAGCCCGCAAAACACAGCCAAAAAGTATGCAGTTTCGTG
rJMFF016A11+ TTTGGTTCAATTATTGGAGCCGAGCCCGCAAAACACAGCCAAAAAGTATGCAGTTTCGTG
____________________________________________________________
consensus TTTGGTTCAATTATTGGAGCCGAGCCCGCAAAACACAGCCAAAAAGTATGCAGTTTCGTG
. : . : . : . : . : . :
rJMFF044K13+ CCTTGCGTTGCTCTCCTCGAGCCACAAATGCAAGAAGCTGATGGTTTCGTATGGGGCGAT
JMFN034I06- CCTTGCGTTGCTCTCCTCGAGCCACAAATGCAAGAAGCTGATGGTTTCGTATGGGGCGAT
rJMFF001C12+ CCTTGCGTTGCTCTCCTCGAGCCACAAATGCAAGAAGCTGATGGTTTCGTATGGGGCGAT
rJMFF016A11+ CCTTGCGTTGCTCTCCTCGAGCCACAAATGCAAGAAGCTGATGGTTTCGTATGGGGCGAT
____________________________________________________________
consensus CCTTGCGTTGCTCTCCTCGAGCCACAAATGCAAGAAGCTGATGGTTTCGTATGGGGCGAT
. : . : . : . : . : . :
rJMFF044K13+ TGGGTACCTGAAGAAGCTCTCTGAAATGGATGTTCCAGGTGCCAAAAAAGTTGCTCCAGC
JMFN034I06- TGGGTACCTGAAGAAGCTCTCTGAAATGGATGGTCCAGGTGCC-AAAAAGTTGCTCCAGC
rJMFF001C12+ TGGGTACCTGAAGAAGCTCTCTGAAATGGATGTTCCAGGTGCC-AAAAAGTTGCTCCAGC
rJMFF016A11+ TGGGTACCTGAAGAAGCTCTCTGAAATGGATGTTCCAGGTGCC-AAAAAGTTGCTCCAGC
____________________________________________________________
consensus TGGGTACCTGAAGAAGCTCTCTGAAATGGATGTTCCAGGTGCC-AAAAAGTTGCTCCAGC
. : . : . : . : . : . :
rJMFF044K13+ GTTTGGAGAGAGGGAGACTCAGAAGCTTGTTTACCACAAAGCTAGTGTAATGTAATCCCC
JMFN034I06- GTTTGGAGAGAGGGAGACTCAGAAGCTTGTTTACCACAAAGCTAGTGTAATGTAATCCCC
rJMFF001C12+ GTTTGGAGAGAGGGAGACTCAGAAGCTTGTTTACCACAAAGCTAGTGTAATGTAATCCCC
rJMFF016A11+ GTTTGGAGAGAGGGAGACTCAGAAGCTTGTTTACCACAAAGCTAGTGTAATGTAATCCCC
____________________________________________________________
consensus GTTTGGAGAGAGGGAGACTCAGAAGCTTGTTTACCACAAAGCTAGTGTAATGTAATCCCC
. : . : . : . : . : . :
rJMFF044K13+ AACTGTATGTGTTTGAATAATATTTCATATTACTTCTAATGGAAAATGCTTATTTCCTGT
JMFN034I06- AACTGTATGTGTTTGAATAATATTTCATATTACTTCT
rJMFF001C12+ AACTGTATGTGTTTGAATAATATTTCATATTACTTCTAATGGAAAATGCTTATTTCCTGT
rJMFF016A11+ AACTGTATGTGTTTGAATAATATTTCATATTACTTCTAATGGAAAATGCTTATTTCCTGT
____________________________________________________________
consensus AACTGTATGTGTTTGAATAATATTTCATATTACTTCTAATGGAAAATGCTTATTTCCTGT
. : . : . : . : . : . :
rJMFF001C12+ ATGTGTTTACCACTCAGAATTAGGGGTATAAATGATCAGAGTTGTTCAATCAAAGTTGGG
rJMFF016A11+ ATGTGTTTACCACTCAGAATTAGGGGTATAAATGATCAGAGTTGTTCAATCAAAGTTGGG
____________________________________________________________
consensus ATGTGTTTACCACTCAGAATTAGGGGTATAAATGATCAGAGTTGTTCAATCAAAGTTGGG
. : . : . : . : . : . :
rJMFF001C12+ CTCAAGTTTGATCAATTTCGAGCTCGAGTTTACTCATTTCGTAATCGAGTCGAATCAAA
rJMFF016A11+ CTCAAGTTTGATCAATTTCGAGCTCGAGTTTACTCATTTCGTAATCGAGTCGAATCAAAT
____________________________________________________________
consensus CTCAAGTTTGATCAATTTCGAGCTCGAGTTTACTCATTTCGTAATCGAGTCGAATCAAAT