Contig 012272:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015J17Sequence539006373 (2)ref|XP_009362229.1|5e-44PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic [Pyrus x bre759012272 (3)ref|XP_010098567.1|5e-106Ferredoxin--NADP reductase, root isozyme [Morus notabilis] gb|EXB75227.1| Ferred
JMSF005A04Sequence265006373 (2)132012272 (3)
JMSF005O06Sequence305004954 (5)105012272 (3)

Alignment

This contig is upended


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rJMFF015J17+                               CTTCTGGTAAGGTAATGCTTCTGCNTGAAGATAACCCAA
                      ____________________________________________________________
consensus                                  CTTCTGGTAAGGTAATGCTTCTGCNTGAAGATAACCCAA
 
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rJMFF015J17+          ATGCTACACACATTATGATTGCAACTGGTACTGGTGTGGCTCCCTACAGAGGGTACCTTC
                      ____________________________________________________________
consensus             ATGCTACACACATTATGATTGCAACTGGTACTGGTGTGGCTCCCTACAGAGGGTACCTTC
 
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rJMFF015J17+          GTCGTATGTTTATGGAATCTGTCCCAACATTCAAGTTCAATGGCCTTGCTTGGCTCTTCC
                      ____________________________________________________________
consensus             GTCGTATGTTTATGGAATCTGTCCCAACATTCAAGTTCAATGGCCTTGCTTGGCTCTTCC
 
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rJMFF015J17+          TTGGGGTGGCCAACCAGGACAGTCTTCTGTATGATGAGGAGTTCACCAAATATCTCCAGG
                      ____________________________________________________________
consensus             TTGGGGTGGCCAACCAGGACAGTCTTCTGTATGATGAGGAGTTCACCAAATATCTCCAGG
 
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rJMFF015J17+          ATTATCCAGATAATTTCAGGTACGAACGTGCTCTTAGCCGGGAGCAGAAGAACAAGAGCG
                      ____________________________________________________________
consensus             ATTATCCAGATAATTTCAGGTACGAACGTGCTCTTAGCCGGGAGCAGAAGAACAAGAGCG
 
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rJMFF015J17+          GAGGCAAGATGTATGTTCAGGACAAAATTGAGGAATACAGTGATGAGATCTTCAAACTGC
                      ____________________________________________________________
consensus             GAGGCAAGATGTATGTTCAGGACAAAATTGAGGAATACAGTGATGAGATCTTCAAACTGC
 
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rJMFF015J17+          TGGATGAAGGAGCGCACATCTATTTCTGTGGGCTGAAGGGAATGATGCCTGGAATTCAGG
                      ____________________________________________________________
consensus             TGGATGAAGGAGCGCACATCTATTTCTGTGGGCTGAAGGGAATGATGCCTGGAATTCAGG
 
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rJMFF015J17+          ATACATTGAAGCGGGTGGCGGAGGAAAGAGGGGAGAGCTGGGAGACGAAGCTTTCACAAC
                      ____________________________________________________________
consensus             ATACATTGAAGCGGGTGGCGGAGGAAAGAGGGGAGAGCTGGGAGACGAAGCTTTCACAAC
 
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rJMSF005A04+                                                        TAGATTTAGACATT
rJMFF015J17+          TCAAAAAGAACAAACAGTGGCACGTTGAGGTCTACTGATAGCATTATAGATTTAGACATT
                      ____________________________________________________________
consensus             TCAAAAAGAACAAACAGTGGCACGTTGAGGTCTACTGATAGCATTATAGATTTAGACATT
 
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rJMSF005A04+          AGGCAGGCAGNGAATTACNGCANTGTTGTTCAGATANTTGTTTGTATGAGTANTGATTCA
rJMFF015J17+          AGGCAGGCAGGGAATTACAGCATTGTTGTTCAGATAATTGTTTGTATGAGTATTGATTCA
                      ____________________________________________________________
consensus             AGGCAGGCAGGGAATTACAGCATTGTTGTTCAGATAATTGTTTGTATGAGTATTGATTCA
 
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rJMSF005A04+          AGAGAACTTGCATGTTTGGTGTTATTNCCTGGTGAAAATGGAAGC               
rJMSF005O06+                                                                  GTAG
rJMFF015J17+          AGAGAACTTGCATGTTTGGTGTTATTTGCTGGTGAAAATGGAAGCTGCTTTATTAGGTAG
                      ____________________________________________________________
consensus             AGAGAACTTGCATGTTTGGTGTTATTTGCTGGTGAAAATGGAAGCTGCTTTATTAGGTAG
 
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rJMSF005O06+          GTATTGCAGAATGAGAAGTCGATTTTAGCCTGAATAANGTAATCCTTTTNTACAGATTGT
rJMFF015J17+          GTATTGCAGAATGAGAAGTAGATTTTAGCCTGAATAATGTAATCCTTTTCTACAGATTGT
                      ____________________________________________________________
consensus             GTATTGCAGAATGAGAAGTCGATTTTAGCCTGAATAATGTAATCCTTTTCTACAGATTGT
 
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rJMSF005O06+          NTCTGTGTAACTTCCAAAACCCT                                     
rJMFF015J17+          TTCTGTGTAACTTCCAAAACCCTGTGGAATTGGGAGTTGGCACTATTGCTAAATCCAGTC
                      ____________________________________________________________
consensus             TTCTGTGTAACTTCCAAAACCCTGTGGAATTGGGAGTTGGCACTATTGCTAAATCCAGTC