| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014K24 | Sequence | 513 | 012271 (4) | ref|XP_009791107.1| | 7e-79 | PREDICTED: dephospho-CoA kinase isoform X1 [Nicotiana sylvestris] | 756 | 012271 (4) | ref|XP_009627700.1| | 5e-118 | PREDICTED: dephospho-CoA kinase isoform X1 [Nicotiana tomentosiformis] ref|XP_00 |
| JMFS151F11 | Sequence | 301 | 012271 (4) | ref|XP_010038187.1| | 8e-41 | PREDICTED: dephospho-CoA kinase [Eucalyptus grandis] ref|XP_010038188.1| PREDICT | |||||
| JMSF037L03 | Sequence | 661 | 012271 (4) | ref|XP_004250350.1| | 7e-34 | PREDICTED: dephospho-CoA kinase [Solanum lycopersicum] ref|XP_010312802.1| PREDI | 699 | 019389 | emb|CBI15033.3| | 3e-14 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF037L03- GACCGCACGCTGCTTCAACACTTCAAATCTTCGAACCACGAATCACCGGCTTCAACACT
____________________________________________________________
consensus GACCGCACGCTGCTTCAACACTTCAAATCTTCGAACCACGAATCACCGGCTTCAACACT
. : . : . : . : . : . :
JMSF037L03- CCCACCCATCGCCCATCGCCTAGCTATCACCGGCTTCACGTTGCACCCCGACCACCACCG
____________________________________________________________
consensus CCCACCCATCGCCCATCGCCTAGCTATCACCGGCTTCACGTTGCACCCCGACCACCACCG
. : . : . : . : . : . :
JMSF037L03- TCGCACACCACCAACTGTCGTCGCACACCCACCACCGCGACGCCGACGCCACAGCCGCCA
____________________________________________________________
consensus TCGCACACCACCAACTGTCGTCGCACACCCACCACCGCGACGCCGACGCCACAGCCGCCA
. : . : . : . : . : . :
JMSF037L03- CCACGCCGTCGATCTGCACCCCTCCCTTGCCCTGCGACGATGGCGGCCTCCCTGTGACGA
____________________________________________________________
consensus CCACGCCGTCGATCTGCACCCCTCCCTTGCCCTGCGACGATGGCGGCCTCCCTGTGACGA
. : . : . : . : . : . :
JMSF037L03- TGCCACAGCCGCCGGCTCCAATCACGCGGTCTGAACCCTAATTTGAATGAGCTAGAATTG
JMFS151F11+ GAATTG
JMFF014K24- GAATTG
____________________________________________________________
consensus TGCCACAGCCGCCGGCTCCAATCACGCGGTCTGAACCCTAATTTGAATGAGCTAGAATTG
. : . : . : . : . : . :
JMSF037L03- CTTCAGGGAAGAGCACCGTCTCAAATCTTTTCAAGTCTCGCGGTATTCCGGTCGTCGATG
JMFS151F11+ CTTCAGGGAAGAGCACAACCTCCAGTCATTTCAAGTCCCGCGGCATTCCAGTCGTGGATG
JMFF014K24- CTTCAGGGAAGAGCACCGTCTCCAATCTTTTCAAGTCCCGCGGTATTCCGGTCGTCGATG
rJMFF014K24+ GTCGTCGATG
____________________________________________________________
consensus CTTCAGGGAAGAGCACCGTCTCCAATCTTTTCAAGTCCCGCGGTATTCCGGTCGTCGATG
. : . : . : . : . : . :
JMSF037L03- CCGACATCGTTGCTCGTAATGCCTTGAACAAAGGCACTCGAGGGTGGAAAAAGGTAGTGG
JMFS151F11+ CCGACATCGTTGCTCGTAATGTCTTAATGAAAGGCACTGTTGGATGGAAAAAGGTAGTGG
JMFF014K24- CCGACATCGTTGCTCGTAATGTCTTGAAGAAAGGCACTGGAGGGTGGAAAAAGGTAGTGG
rJMFF014K24+ CCGACATCGTTGCTCGTAATGTCTTGAAGAAAGGCACTGGAGGGTGGAAAAAGGTAGTGG
____________________________________________________________
consensus CCGACATCGTTGCTCGTAATGTCTTGAAGAAAGGCACTGGAGGGTGGAAAAAGGTAGTGG
. : . : . : . : . : . :
JMSF037L03- CTGCATTTGGAGAAGACATCTTGCAGGCCAATGGCGAGGTGGATCGTGCCAAGCTGGGTC
JMFS151F11+ CTACATTTGGGGAGGACATCTTGCAGGCCAACGGCGAGGTGGATCGTGGCAAGCTTGGTC
JMFF014K24- CTGCATTTGGAGAAGACATCTTGCAGGCCAATGGCGAGGTGGATCGCGCCAAGCTGGGTC
rJMFF014K24+ CTGCATTTGGAGAAGACATCTTGCAGGCCAATGGCGAGGTGGATCGCGCCAAGCTGGGTC
____________________________________________________________
consensus CTGCATTTGGAGAAGACATCTTGCAGGCCAATGGCGAGGTGGATCGTGCCAAGCTGGGTC
. : . : . : . : . : . :
JMSF037L03- AAATTGTGTTTTCTGATCCTGCAAAACGACACCTCCTTAATAG
JMFS151F11+ AAGTTGTATTTTCTGATCCTGCAAAACGCCAGCTCCTTAATAG
JMFF014K24- AAATCGTGTTTTCTGATCCTGCAAAACGCCACCTCCTTAATAGGCTGTTAGCGCCTTATA
rJMFF014K24+ AAATCGTGTTTTCTGATCCTGCAAAACGCCACCTCCTTAATAGGCTGTTAGCGCCTTATA
____________________________________________________________
consensus AAATTGTGTTTTCTGATCCTGCAAAACGCCACCTCCTTAATAGGCTGTTAGCGCCTTATA
. : . : . : . : . : . :
JMFF014K24- TTTCATCCGGTATCTTTATGGAAGTCTTGAAGCTGTGGATGAAGGGTTGCAAGATAATTG
rJMFF014K24+ TTTCATCCGGTATCTTTATGGAAGTCTTGAAGCTGTGGATGAAGGGTTGCAAGATAATTG
____________________________________________________________
consensus TTTCATCCGGTATCTTTATGGAAGTCTTGAAGCTGTGGATGAAGGGTTGCAAGATAATTG
. : . : . : . : . : . :
JMFF014K24- TTCTCGATGTGCCTCTTTTATTTGAAGCCAAGATGGATAAGTGGACTAAACCGATTATTG
rJMFF014K24+ TTCTCGATGTGCCTCTTTTATTTGAAGCCAAGATGGATAAGTGGACTAAACCGATTATTG
____________________________________________________________
consensus TTCTCGATGTGCCTCTTTTATTTGAAGCCAAGATGGATAAGTGGACTAAACCGATTATTG
. : . : . : . : . : . :
JMFF014K24- TTGTTTGGGTA
rJMFF014K24+ TTGTTTGGGTAGACCCGGAGACACAGCTTCAGCGGCTCATGACAAGGGATGGATCTATAG
____________________________________________________________
consensus TTGTTTGGGTAGACCCGGAGACACAGCTTCAGCGGCTCATGACAAGGGATGGATCTATAG
. : . : . : . : . : . :
rJMFF014K24+ AGGAAGAGGCCAAAAGCAGGATAAGTTCTCAGATGTCTCTGGATGTAAAGAGGACAAAGG
____________________________________________________________
consensus AGGAAGAGGCCAAAAGCAGGATAAGTTCTCAGATGTCTCTGGATGTAAAGAGGACAAAGG
. : . : . : . : . : . :
rJMFF014K24+ CGGATATTGTGATTGATAATACAGGGACACTAGAGGATTTGAATAAGCAGTTTGAGGCGG
____________________________________________________________
consensus CGGATATTGTGATTGATAATACAGGGACACTAGAGGATTTGAATAAGCAGTTTGAGGCGG
. : . : . : . : . : . :
rJMFF014K24+ TGTTAATCCAGATAACAAAGCCATTGACTTGGACCGAGTATGCACTTACCAGACAGGGAG
____________________________________________________________
consensus TGTTAATCCAGATAACAAAGCCATTGACTTGGACCGAGTATGCACTTACCAGACAGGGAG
. : . : . : . : . : . :
rJMFF014K24+ CTATTCTTGGATTGCTTTCTATTTTCGTTGGCGTTGTAATATGCAAGAAAAGTTTATGAT
____________________________________________________________
consensus CTATTCTTGGATTGCTTTCTATTTTCGTTGGCGTTGTAATATGCAAGAAAAGTTTATGAT
. : . : . : . : . : . :
rJMFF014K24+ TGTAATTTCTTTAAACTTTTCATTAATGTTTTGTGTTTGAAGTATTCTACTCGAAAACTG
____________________________________________________________
consensus TGTAATTTCTTTAAACTTTTCATTAATGTTTTGTGTTTGAAGTATTCTACTCGAAAACTG
. : . : . : . : . : . :
rJMFF014K24+ GATCCATTTGTTGAAAGTTTCTTATTGTGCTAACATAGCATGCAGGATACCAATTTCATT
____________________________________________________________
consensus GATCCATTTGTTGAAAGTTTCTTATTGTGCTAACATAGCATGCAGGATACCAATTTCATT