Contig 012266:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001J14Sequence592003201 (12)ref|XP_009770420.1|7e-106PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr675012266 (13)gb|ABR25526.1|1e-11526S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF011E12Sequence617003201 (12)ref|XP_009770420.1|7e-108PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr727012266 (13)gb|ABR25526.1|5e-12326S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF011L16Sequence555003201 (12)ref|XP_009770420.1|2e-91PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr749012266 (13)gb|ABR25526.1|4e-13126S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF014B02Sequence598003201 (12)ref|XP_009770420.1|9e-71PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr301012266 (13)
JMFF019A06Sequence546003201 (12)ref|XP_009599866.1|3e-87PREDICTED: 26S protease regulatory subunit 8 homolog A [Nicotiana tomentosiform772012266 (13)gb|ABR25526.1|2e-12026S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF019H15Sequence559003201 (12)ref|XP_009770420.1|2e-91PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr716012266 (13)gb|ABR25526.1|6e-12326S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF023B16Sequence505003201 (12)ref|XP_009770420.1|6e-83PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr733012266 (13)gb|AFW66097.1|2e-93hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFF030L04Sequence473003201 (12)ref|XP_009770420.1|7e-64PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr601012266 (13)gb|AFW66097.1|9e-101hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFF031D08Sequence589003201 (12)ref|XP_009770420.1|4e-100PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr678012266 (13)gb|ABR25526.1|1e-10726S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF048F19Sequence431003201 (12)ref|XP_009770420.1|7e-58PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr218012266 (13)
JMFF049F23Sequence644003201 (12)ref|XP_009770420.1|2e-115PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr588012266 (13)gb|AFW66097.1|6e-63hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFN005L16Sequence481012266 (13)ref|XP_002285273.1|1e-35PREDICTED: 26S protease regulatory subunit 8 homolog A [Vitis vinifera] emb|CBI
JMFN028N22Sequence535012266 (13)ref|XP_010420829.1|7e-50PREDICTED: 26S protease regulatory subunit 8 homolog B-like [Camelina sativa]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF019H15+ TCTCGTATGGTGAGAGA
rJMFF011L16+ AACTAGTGCAGAAATATATTGGGGAAGGTTCTCGTATGGTGAGAGA
rJMFF011E12+ ATGGTGAGAGA
rJMFF019A06+ TGAGAGA
                      ____________________________________________________________
consensus AACTAGTGCAGAAATATATTGGGGAAGGTTCTCGTATGGTGAGAGA
 
. : . : . : . : . : . :
rJMFF019H15+ ACTTTTTGTTATGNCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
rJMFF011L16+ ACTTTTTGTTATGGCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
rJMFF011E12+ ACTTTTTGTTATGGCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
rJMFF001J14+ CCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
rJMFF031D08+ GGATGAAATAGACAG
rJMFF019A06+ ACTTTTTGTTATGGCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
                      ____________________________________________________________
consensus ACTTTTTGTTATGGCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
 
. : . : . : . : . : . :
rJMFF030L04+ CTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCNC
rJMFF019H15+ CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF011L16+ CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF011E12+ CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF001J14+ CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF031D08+ CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF019A06+ CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF023B16+ GACAGTGAGGTGCAGCGCAC
                      ____________________________________________________________
consensus CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
 
. : . : . : . : . : . :
rJMFF030L04+ AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF019H15+ AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF011L16+ AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF011E12+ AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF001J14+ AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF031D08+ AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF019A06+ AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF023B16+ AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
                      ____________________________________________________________
consensus AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
 
. : . : . : . : . : . :
rJMFF030L04+ AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF019H15+ AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF011L16+ AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF011E12+ AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF001J14+ AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF031D08+ AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF019A06+ AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF049F23+ AGGCCAGGCAGAATTGA
rJMFF023B16+ AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
                      ____________________________________________________________
consensus AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
 
. : . : . : . : . : . :
rJMFF030L04+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF019H15+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF011L16+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF011E12+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF001J14+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF031D08+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF019A06+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
JMFN028N22- AGAGTCTCGCTGGGATATCCTGAAGATTCA
JMFN005L16- AGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF049F23+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF023B16+ CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
                      ____________________________________________________________
consensus CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
 
. : . : . : . : . : . :
rJMFF030L04+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF019H15+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF011L16+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF011E12+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF001J14+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF031D08+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF019A06+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
JMFN028N22- TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
JMFN005L16- TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAGTATGA
rJMFF049F23+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF023B16+ TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
                      ____________________________________________________________
consensus TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
 
. : . : . : . : . : . :
rJMFF030L04+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF019H15+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF011L16+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF011E12+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF001J14+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF031D08+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF019A06+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
JMFN028N22- ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
JMFN005L16- ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF049F23+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF023B16+ ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
                      ____________________________________________________________
consensus ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
 
. : . : . : . : . : . :
rJMFF030L04+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF019H15+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF011L16+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF011E12+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF001J14+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF031D08+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF019A06+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
JMFN028N22- GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
JMFN005L16- GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF049F23+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF023B16+ GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
                      ____________________________________________________________
consensus GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
 
. : . : . : . : . : . :
rJMFF030L04+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF019H15+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF011L16+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF011E12+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF001J14+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF031D08+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF048F19+ GGAAGTAATTTGACATCTCAC
rJMFF019A06+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
JMFN028N22- AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
JMFN005L16- AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF049F23+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF023B16+ AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF014B02+ C
                      ____________________________________________________________
consensus AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
 
. : . : . : . : . : . :
rJMFF030L04+ CGAGCTTTCCTCGTAGCC--GTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF019H15+ CGAGCTTTCCTCGTAGCC--GTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF011L16+ CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF011E12+ CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF001J14+ CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF031D08+ CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF048F19+ CGAGCTTTCCTGGTAGCC--GTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF019A06+ CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
JMFN028N22- CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
JMFN005L16- CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF049F23+ CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF023B16+ CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF014B02+ CGAGCTTTCCTCGTAGCCGNGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
                      ____________________________________________________________
consensus CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
 
. : . : . : . : . : . :
rJMFF030L04+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF019H15+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF011L16+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF011E12+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF001J14+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF031D08+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF048F19+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF019A06+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
JMFN028N22- CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
JMFN005L16- CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF049F23+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF023B16+ CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF014B02+ CCAGGGGGTTTCATNNNCCGTTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTATN
                      ____________________________________________________________
consensus CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
 
. : . : . : . : . : . :
rJMFF030L04+ TTAGATCCCTTTC
rJMFF019H15+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCAT
rJMFF011L16+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAA
rJMFF011E12+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATT
rJMFF001J14+ TTAGATCCCTTTCTGTTTTTGTATCTGACTG
rJMFF031D08+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATT
rJMFF048F19+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
rJMFF019A06+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
JMFN028N22- TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
JMFN005L16- TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
rJMFF049F23+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
rJMFF023B16+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
rJMFF014B02+ TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
                      ____________________________________________________________
consensus TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
 
. : . : . : . : . : . :
rJMFF048F19+ TCGCTCAA
rJMFF019A06+ TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAAC
JMFN028N22- TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
JMFN005L16- TCGCTCAAGTAGCATGACATGCTTTTCAGTCT
rJMFF049F23+ TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
rJMFF023B16+ TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
rJMFF014B02+ TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
                      ____________________________________________________________
consensus TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
 
. : . : . : . : . : . :
JMFN028N22- TTCAATCCTGAAACACAGCTGTTCTTG
rJMFF049F23+ TTCAATCCTGAAACACAGCTGTTCTTG
rJMFF023B16+ TTCAATCCTGAAACACAGCTGTTCTTGAAGGGTTATAGCAGCCTCTCAAGTCGTA
rJMFF014B02+ TTCAATCCTGAAACACAGCTGTTCTTGAAGGGTTATAGCAGCCTCTCAAGTCGTATGATA
                      ____________________________________________________________
consensus TTCAATCCTGAAACACAGCTGTTCTTGAAGGGTTATAGCAGCCTCTCAAGTCGTATGATA