Contig 012266:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001J14Sequence592003201 (12)ref|XP_009770420.1|7e-106PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr675012266 (13)gb|ABR25526.1|1e-11526S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF011E12Sequence617003201 (12)ref|XP_009770420.1|7e-108PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr727012266 (13)gb|ABR25526.1|5e-12326S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF011L16Sequence555003201 (12)ref|XP_009770420.1|2e-91PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr749012266 (13)gb|ABR25526.1|4e-13126S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF014B02Sequence598003201 (12)ref|XP_009770420.1|9e-71PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr301012266 (13)
JMFF019A06Sequence546003201 (12)ref|XP_009599866.1|3e-87PREDICTED: 26S protease regulatory subunit 8 homolog A [Nicotiana tomentosiform772012266 (13)gb|ABR25526.1|2e-12026S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF019H15Sequence559003201 (12)ref|XP_009770420.1|2e-91PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr716012266 (13)gb|ABR25526.1|6e-12326S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF023B16Sequence505003201 (12)ref|XP_009770420.1|6e-83PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr733012266 (13)gb|AFW66097.1|2e-93hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFF030L04Sequence473003201 (12)ref|XP_009770420.1|7e-64PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr601012266 (13)gb|AFW66097.1|9e-101hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFF031D08Sequence589003201 (12)ref|XP_009770420.1|4e-100PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr678012266 (13)gb|ABR25526.1|1e-10726S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF048F19Sequence431003201 (12)ref|XP_009770420.1|7e-58PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr218012266 (13)
JMFF049F23Sequence644003201 (12)ref|XP_009770420.1|2e-115PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr588012266 (13)gb|AFW66097.1|6e-63hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFN005L16Sequence481012266 (13)ref|XP_002285273.1|1e-35PREDICTED: 26S protease regulatory subunit 8 homolog A [Vitis vinifera] emb|CBI
JMFN028N22Sequence535012266 (13)ref|XP_010420829.1|7e-50PREDICTED: 26S protease regulatory subunit 8 homolog B-like [Camelina sativa]

Alignment

This contig is upended


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rJMFF019H15+                                                     TCTCGTATGGTGAGAGA
rJMFF011L16+                        AACTAGTGCAGAAATATATTGGGGAAGGTTCTCGTATGGTGAGAGA
rJMFF011E12+                                                           ATGGTGAGAGA
rJMFF019A06+                                                               TGAGAGA
                      ____________________________________________________________
consensus                           AACTAGTGCAGAAATATATTGGGGAAGGTTCTCGTATGGTGAGAGA
 
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rJMFF019H15+          ACTTTTTGTTATGNCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
rJMFF011L16+          ACTTTTTGTTATGGCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
rJMFF011E12+          ACTTTTTGTTATGGCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
rJMFF001J14+                        CCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
rJMFF031D08+                                                       GGATGAAATAGACAG
rJMFF019A06+          ACTTTTTGTTATGGCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
                      ____________________________________________________________
consensus             ACTTTTTGTTATGGCCAGAGAGCATGCTCCATCTATTATATTTATGGATGAAATAGACAG
 
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rJMFF030L04+                  CTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCNC
rJMFF019H15+          CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF011L16+          CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF011E12+          CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF001J14+          CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF031D08+          CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF019A06+          CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
rJMFF023B16+                                                  GACAGTGAGGTGCAGCGCAC
                      ____________________________________________________________
consensus             CATTGGATCTGCTAGAATGGAATCAGGAAGTGGCAATGGTGACAGTGAGGTGCAGCGCAC
 
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rJMFF030L04+          AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF019H15+          AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF011L16+          AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF011E12+          AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF001J14+          AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF031D08+          AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF019A06+          AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
rJMFF023B16+          AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
                      ____________________________________________________________
consensus             AATGTTGGAGCTTCTTAACCAGCTGGATGGATTTGAGGCATCAAACAAGATTAAGGTATT
 
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rJMFF030L04+          AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF019H15+          AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF011L16+          AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF011E12+          AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF001J14+          AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF031D08+          AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF019A06+          AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
rJMFF049F23+                                                     AGGCCAGGCAGAATTGA
rJMFF023B16+          AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
                      ____________________________________________________________
consensus             AATGGCCACCAACCGTATTGATATTCTGGATCAAGCTCTCCTTAGGCCAGGCAGAATTGA
 
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rJMFF030L04+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF019H15+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF011L16+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF011E12+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF001J14+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF031D08+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF019A06+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
JMFN028N22-                                         AGAGTCTCGCTGGGATATCCTGAAGATTCA
JMFN005L16-                                         AGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF049F23+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
rJMFF023B16+          CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
                      ____________________________________________________________
consensus             CAGGAAAATTGAATTTCCAAATCCCAATGAAGAGTCTCGCTGGGATATCCTGAAGATTCA
 
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rJMFF030L04+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF019H15+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF011L16+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF011E12+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF001J14+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF031D08+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF019A06+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
JMFN028N22-           TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
JMFN005L16-           TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAGTATGA
rJMFF049F23+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
rJMFF023B16+          TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
                      ____________________________________________________________
consensus             TTCAAGGAAAATGAACTTGATGCGTGGCATTGACTTGAAAAAGATAGCTGAAAAG-ATGA
 
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rJMFF030L04+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF019H15+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF011L16+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF011E12+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF001J14+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF031D08+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF019A06+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
JMFN028N22-           ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
JMFN005L16-           ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF049F23+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
rJMFF023B16+          ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
                      ____________________________________________________________
consensus             ATGGCGCTTCAGGGGCTGAGCTTAAGGCTGTTTGCACAGAAGCAGGTATGTTTGCGTTGA
 
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rJMFF030L04+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF019H15+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF011L16+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF011E12+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF001J14+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF031D08+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF019A06+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
JMFN028N22-           GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
JMFN005L16-           GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF049F23+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
rJMFF023B16+          GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
                      ____________________________________________________________
consensus             GAGAAAGGAGGGTCCATGTCACGCAGGAAGATTTTGAGATGGCAGTTGCGAAGGTGATGA
 
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rJMFF030L04+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF019H15+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF011L16+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF011E12+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF001J14+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF031D08+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF048F19+                                                 GGAAGTAATTTGACATCTCAC
rJMFF019A06+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
JMFN028N22-           AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
JMFN005L16-           AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF049F23+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF023B16+          AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
rJMFF014B02+                                                                     C
                      ____________________________________________________________
consensus             AGAAAGATACGGAGAAAAACATGTCATTGCGCAAGCTATGGAAGTAATTTGACATCTCAC
 
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rJMFF030L04+          CGAGCTTTCCTCGTAGCC--GTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF019H15+          CGAGCTTTCCTCGTAGCC--GTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF011L16+          CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF011E12+          CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF001J14+          CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF031D08+          CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF048F19+          CGAGCTTTCCTGGTAGCC--GTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF019A06+          CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
JMFN028N22-           CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
JMFN005L16-           CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF049F23+          CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF023B16+          CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
rJMFF014B02+          CGAGCTTTCCTCGTAGCCGNGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
                      ____________________________________________________________
consensus             CGAGCTTTCCTCGTAGCCGTGTAAGCCCCAAAATGTGTTCATCATGCTGATATGGAAGCA
 
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rJMFF030L04+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF019H15+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF011L16+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF011E12+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF001J14+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF031D08+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF048F19+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF019A06+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
JMFN028N22-           CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
JMFN005L16-           CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF049F23+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF023B16+          CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
rJMFF014B02+          CCAGGGGGTTTCATNNNCCGTTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTATN
                      ____________________________________________________________
consensus             CCAGGGGGTTTCAT-AGCCATTTGAATATTTCTCTTCAAACTTCATCAAATCAGTTTACT
 
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rJMFF030L04+          TTAGATCCCTTTC                                               
rJMFF019H15+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCAT                 
rJMFF011L16+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAA               
rJMFF011E12+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATT      
rJMFF001J14+          TTAGATCCCTTTCTGTTTTTGTATCTGACTG                             
rJMFF031D08+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATT      
rJMFF048F19+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
rJMFF019A06+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
JMFN028N22-           TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
JMFN005L16-           TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
rJMFF049F23+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
rJMFF023B16+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
rJMFF014B02+          TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
                      ____________________________________________________________
consensus             TTAGATCCCTTTCTGTTTTTGTATCTGACTGGTTTTCTTTCATAATTTAAGATTTGTGAT
 
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rJMFF048F19+          TCGCTCAA                                                    
rJMFF019A06+          TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAAC             
JMFN028N22-           TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
JMFN005L16-           TCGCTCAAGTAGCATGACATGCTTTTCAGTCT                            
rJMFF049F23+          TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
rJMFF023B16+          TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
rJMFF014B02+          TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
                      ____________________________________________________________
consensus             TCGCTCAAGTAGCATGACATGCTTTTCAGTCTTCTGTTGTCATCAACTGGTAAACATAAT
 
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JMFN028N22-           TTCAATCCTGAAACACAGCTGTTCTTG                                 
rJMFF049F23+          TTCAATCCTGAAACACAGCTGTTCTTG                                 
rJMFF023B16+          TTCAATCCTGAAACACAGCTGTTCTTGAAGGGTTATAGCAGCCTCTCAAGTCGTA     
rJMFF014B02+          TTCAATCCTGAAACACAGCTGTTCTTGAAGGGTTATAGCAGCCTCTCAAGTCGTATGATA
                      ____________________________________________________________
consensus             TTCAATCCTGAAACACAGCTGTTCTTGAAGGGTTATAGCAGCCTCTCAAGTCGTATGATA