Contig 012264:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013K08Sequence598011546 (3)gb|KDO65255.1|1e-72hypothetical protein CISIN_1g008242mg [Citrus sinensis]665012264 (2)gb|KDO65257.1|5e-64hypothetical protein CISIN_1g0445341mg, partial [Citrus sinensis]
JMFF024D04Sequence468011546 (3)gb|KDO65255.1|9e-48hypothetical protein CISIN_1g008242mg [Citrus sinensis]723012264 (2)gb|AJO70156.1|1e-70invertase 6 [Camellia sinensis]

Alignment

This contig is upended


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rJMFF024D04+                            CTGCGTTCAAATAAGGTTGAGATGCCCAGTACGATGCTCAAG
                      ____________________________________________________________
consensus                               CTGCGTTCAAATAAGGTTGAGATGCCCAGTACGATGCTCAAG
 
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rJMFF024D04+          AAAGGATCTGTATCTGAAGTTTCAGGAATCAGTGCCGCTCAGGCGGATGGAGGTTACGTT
                      ____________________________________________________________
consensus             AAAGGATCTGTATCTGAAGTTTCAGGAATCAGTGCCGCTCAGGCGGATGGAGGTTACGTT
 
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rJMFF024D04+          TAAGATAATGGAGTTTGGGAAGGCAGAAAAAATGGAGGAAAGATGGACGACAGACCCTCA
rJMFF013K08+                                                                 CCTCA
                      ____________________________________________________________
consensus             TAAGATAATGGAGTTTGGGAAGGCAGAAAAAATGGAGGAAAGATGGACGACAGACCCTCA
 
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rJMFF024D04+          AGTGTTGTGCAGCCAGAAGGGGGCATCAGTACGAGGAGGAATAGGGCCATTTGGGTTGAA
rJMFF013K08+          AGTGTTGTGCAGCCAGAAGGGGGCATCAGTACGAGGAGGAATAGGGCCATTTGGGTTGAA
                      ____________________________________________________________
consensus             AGTGTTGTGCAGCCAGAAGGGGGCATCAGTACGAGGAGGAATAGGGCCATTTGGGTTGAA
 
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rJMFF024D04+          GGTTTTGGCTTCAGAAAACAGGCAAGAATACACAGCAGTGTTCTTCAGAGTCTTCATGGG
rJMFF013K08+          GGTTTTGGCTTCAGAAAACAGGCAAGAATACACAGCAGTGTTCTTCAGAGTCTTCATGGG
                      ____________________________________________________________
consensus             GGTTTTGGCTTCAGAAAACAGGCAAGAATACACAGCAGTGTTCTTCAGAGTCTTCATGGG
 
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rJMFF024D04+          AAACAACAATAATCCTGTCGTGCTCATGTGCAGTGATCAAACCAGGTCTTCACTAGACAA
rJMFF013K08+          AAACAACAATAATCCTGTCGTGCTCATGTGCAGTGATCAAACCAGGTCTTCACTAGACAA
                      ____________________________________________________________
consensus             AAACAACAATAATCCTGTCGTGCTCATGTGCAGTGATCAAACCAGGTCTTCACTAGACAA
 
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rJMFF024D04+          GAAGACAGATAAGACCAGTTATGGTGCATTTGTGGATGTGAATCCTATGCAAGAAGAATT
rJMFF013K08+          GAAGACAGATAAGACCAGTTATGGTGCATTTGTGGATGTGAATCCTATGCAAGAAGAATT
                      ____________________________________________________________
consensus             GAAGACAGATAAGACCAGTTATGGTGCATTTGTGGATGTGAATCCTATGCAAGAAGAATT
 
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rJMFF024D04+          ATCACTCAGGATCTTGATTGACCACTCCATAGTGGAGAGCTTTGGAGCAAAAGGAAAGGT
rJMFF013K08+          ATCACTCAGGATCTTGATTGACCACTCCATAGTGGAGAGCTTTGGAGCAAAAGGAAAGGT
                      ____________________________________________________________
consensus             ATCACTCAGGATCTTGATTGACCACTCCATAGTGGAGAGCTTTGGAGCAAAAGGAAAGGT
 
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rJMFF024D04+          TTGCATTACTTCAAGGGTTTATCCCACAAAGGCTATTGGTGAGAAGGCACACTTGTATGC
rJMFF013K08+          TTGCATTACTTCAAGGGTTTATCCCACAAAGGCTATTGGTGAGAAGGCACACTTGTATGC
                      ____________________________________________________________
consensus             TTGCATTACTTCAAGGGTTTATCCCACAAAGGCTATTGGTGAGAAGGCACACTTGTATGC
 
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rJMFF024D04+          ATTCAATAATGGAGTCCACAGCATTAAGCTCTCCAAATTGACTGCTTGGTCCATGAAAAA
rJMFF013K08+          ATTCAATAATGGAGTCCACAGCATTAAGCTCTCCAAATTGACTGCTTGGTCCATGAAAAA
                      ____________________________________________________________
consensus             ATTCAATAATGGAGTCCACAGCATTAAGCTCTCCAAATTGACTGCTTGGTCCATGAAAAA
 
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rJMFF024D04+          ACCAACCATCAATTGACTCCATCCTCAATATTAATGTTACTAAGGATATATCATATAAAT
rJMFF013K08+          ACCAACCATCAATTGACTCCATCCTCAATATTAATGTTACTAAGGATATATCATATAAAT
                      ____________________________________________________________
consensus             ACCAACCATCAATTGACTCCATCCTCAATATTAATGTTACTAAGGATATATCATATAAAT
 
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rJMFF024D04+          AAATAAATTAGCTTGTCGGTCTGGTGATGATTACATTTGTATGTCGTGCGTTATTTTTAA
rJMFF013K08+          AAATAAATTAGCTTGTCGGTCTGGTGATGATTACATTTGTATGTCGTGCGTTATTTTTAA
                      ____________________________________________________________
consensus             AAATAAATTAGCTTGTCGGTCTGGTGATGATTACATTTGTATGTCGTGCGTTATTTTTAA
 
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rJMFF024D04+          TGTAACTTATTATGCAAGTAA                                       
rJMFF013K08+          TGTAACTTATTATGCAAGTAATAATATAAAGATTGATGATGAAGAAAGCATGTACTCATT
                      ____________________________________________________________
consensus             TGTAACTTATTATGCAAGTAATAATATAAAGATTGATGATGAAGAAAGCATGTACTCATT
 
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rJMFF013K08+          TCATTACATATATATATATAGTATTTTTAATGTAACTTATTATGCAAGTAATTNATANAA
                      ____________________________________________________________
consensus             TCATTACATATATATATATAGTATTTTTAATGTAACTTATTATGCAAGTAATTNATANAA