Contig 012260:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF012K23-                                                            TCAAAGCTAAG
JMSF048E19-                                                          GGTCAAAGCTAAG
                      ____________________________________________________________
consensus                                                            GGTCAAAGCTAAG
 
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JMFF012K23-           GCAATCAACTCTCATACCAAACACAAACTTTCTTCAATTCTCATCATCTTTTTGCTAGCT
JMSF048E19-           GCAATCAACTCTCATACCAAACACAAACTTTCTTCAATTCTCATCATCTTTTTGCTAGCT
                      ____________________________________________________________
consensus             GCAATCAACTCTCATACCAAACACAAACTTTCTTCAATTCTCATCATCTTTTTGCTAGCT
 
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JMFF012K23-           ACCTTTTCTCTCTCCATATCACTACACTACCACTATATATATATATATATCACCACCGTA
JMSF048E19-           ACCTTTTCTCTCTCCATATCACTACACTACCACTATATATATATATATATCACCACCGTA
                      ____________________________________________________________
consensus             ACCTTTTCTCTCTCCATATCACTACACTACCACTATATATATATATATATCACCACCGTA
 
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JMFF012K23-           ATGGCTCCGCCGGCTGTTATTGATACTGGTGTTACTACTGAGAAACTAAGAATTAGTGAT
JMSF048E19-           NTGGCTCCGCCGGNTGTTATTGATACTGGTGTTACTACTGAGAAACTAAGAATTAGTGAT
                      ____________________________________________________________
consensus             ATGGCTCCGCCGGCTGTTATTGATACTGGTGTTACTACTGAGAAACTAAGAATTAGTGAT
 
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JMFF012K23-           AAAATCTATGCCAGACTTAGGTTGGCAAAAGAATCAGATGTGAGTCATATTTACAAACTG
JMSF048E19-           AAAATCTATGCCAGACTTAGGTTGGCAAAAGAATCCGATGTGAGTCATATTTACAAACTG
                      ____________________________________________________________
consensus             AAAATCTATGCCAGACTTAGGTTGGCAAAAGAATCCGATGTGAGTCATATTTACAAACTG
 
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JMFF012K23-           TTTTACCAAATCCATGAATACCACAGTTTAACGCACCTCTATAAAGTGAGCGAGGATTCT
JMSF048E19-           TTTTACCAAATCCATGAATACCACAGTTTAACGCACCTCTATAAAGTGAGCGAGGATTCT
rJMSF048E19+           TTTACCAAATCCATGAATACCACAGTTTAACGCACCTCTATAAAGTGAGCGAGGATTCT
rJMFF012K23+                                  AGTTTAACGCACCTCTATAAAGTGAGCGAGGATTCT
                      ____________________________________________________________
consensus             TTTTACCAAATCCATGAATACCACAGTTTAACGCACCTCTATAAAGTGAGCGAGGATTCT
 
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JMFF012K23-           TTGTGCAAGATGCTTTTCAAAGAAAACCCTAACCCTCCGTTCTACTCGCCGACCATCCTC
JMSF048E19-           TTGTGCAAGATGCTTTTCAAAGAAAACCCTAACCCTCCGTTCTACTCGCCGACCATCCTC
rJMSF048E19+          TTGTGCAAGATGCTTTTCAAAGAAAACCCTAACCCTCCGTTCTACTCGCCGACCATCCTC
rJMFF012K23+          TTGTGCAAGATGCTTTTCAAAGAAAACCCTAACCCTCCGTTCTACTCGCCGACCATCCTC
                      ____________________________________________________________
consensus             TTGTGCAAGATGCTTTTCAAAGAAAACCCTAACCCTCCGTTCTACTCGCCGACCATCCTC
 
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JMFF012K23-           CTCGTCGAGGTATCCGCCACCGAGTTCCCCGCCCCGACCCCCGACGAGTCGGGGTTCGAG
JMSF048E19-           CTCGTCGAGGTATCCGCCACCGAGTTCCCCGCCCCGACCCCCGACGAGTCGGGGTTCGAG
rJMSF048E19+          CTCGTCGAGGTATCCGCCACCGAGTTCCCCGCCCCGACCCCCGACGAGTCGGGGTTCGAG
rJMFF012K23+          CTCGTCGAGGTATCCGCCACCGAGTTCCCCGCCCCGACCCCCGACGAGTCGGGGTTCGAG
                      ____________________________________________________________
consensus             CTCGTCGAGGTATCCGCCACCGAGTTCCCCGCCCCGACCCCCGACGAGTCGGGGTTCGAG
 
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JMFF012K23-           CCGATCGTCAAGGAGTTCGACCTCAAAGCCCCCGTCGCCGACGACGAGAGCGATGCCTTC
JMSF048E19-           CCGATCGTCAAGGAGTTCGACCTCAAAGCCCCCGTCGCCGACGACGAGAGCGATGCCTTC
rJMSF048E19+          CCGATCGTCAAGGAGTTCGACCTCAAAGCCCCCGTCGCCGACGACGAGAGCGATGCCTTC
rJMFF012K23+          CCGATCGTCAAGGAGTTCGACCTCAAAGCCCCCGTCGCCGACGACGAGAGCGATGCCTTC
                      ____________________________________________________________
consensus             CCGATCGTCAAGGAGTTCGACCTCAAAGCCCCCGTCGCCGACGACGAGAGCGATGCCTTC
 
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JMFF012K23-           CGGTCCAAC                                                   
JMSF048E19-           CGGTCCAACGTGGCCGACCACGAGGCCTATATCGCCGGCTACGCCTTCTTCTTCCCCAAC
rJMSF048E19+          CGGTCCAACGTGGCCGACCACGAGGCCTATATCGCCGGCTACGCCTTCTTCTTCCCCAAC
rJMFF012K23+          CGGTCCAACGTGGCCGACCACGAGGCCTATATCGCCGGCTACGCCTTCTTCTTCCCCAAC
                      ____________________________________________________________
consensus             CGGTCCAACGTGGCCGACCACGAGGCCTATATCGCCGGCTACGCCTTCTTCTTCCCCAAC
 
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JMSF048E19-           TACTCGTGCTTCTACGACAAGCCCGGGATCTTCTTCGAGAGCCTGTACTTCCGGGCTAGC
rJMSF048E19+          TACTCGTGCTTCTACGACAAGCCCGGGATCTTCTTCGAGAGCCTGTACTTCCGGGCTAGC
rJMFF012K23+          TACTCGTGCTTCTACGACAAGCCCGGGATCTTCTTCGAGAGCCTGTACTTCCGGGCTAGC
                      ____________________________________________________________
consensus             TACTCGTGCTTCTACGACAAGCCCGGGATCTTCTTCGAGAGCCTGTACTTCCGGGCTAGC
 
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JMSF048E19-           TACCGGAAGCTGGGGATGGGGCGGCTGATGTTCTCCACCGTCGCCGCCNATGCCG     
rJMSF048E19+          TACCGGAAGCTGGGGATGGGGCGGCTGATGTTCTCCACCGTCGCCGCCAATGCCGCCGAC
rJMFF012K23+          TACCGGAAGCTGGGGATGGGGCGGCTGATGTTCTCCACCGTCGCCGCCAATGCCGCCGAC
                      ____________________________________________________________
consensus             TACCGGAAGCTGGGGATGGGGCGGCTGATGTTCTCCACCGTCGCCGCCAATGCCGCCGAC
 
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rJMSF048E19+          AAGGGGTTCTCGTCCGTCGAGGGGATCGTGGCGGTCTGGAACAAGAAATCCTACGACTTC
rJMFF012K23+          AAGGGGTTCTCGTCCGTCGAGGGGATCGTGGCGGTCTGGAACAAGAAATCCTACGACTTC
                      ____________________________________________________________
consensus             AAGGGGTTCTCGTCCGTCGAGGGGATCGTGGCGGTCTGGAACAAGAAATCCTACGACTTC
 
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rJMSF048E19+          TACGTCGACATGGGCGTTGAAATCATGGACGAGTTCCGGTACGGCAAGCTCACCGGCGAC
rJMFF012K23+          TACGTCGACATGGGCGTTGAAATCATGGACGAGTTCCGGTACGGCAAGCTCACCGGCGAC
                      ____________________________________________________________
consensus             TACGTCGACATGGGCGTTGAAATCATGGACGAGTTCCGGTACGGCAAGCTCACCGGCGAC
 
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rJMSF048E19+          GCCCTTCAAGCGTATGCTAAGAAGAAGAGTTCTTAATTTATTTATTGCAAATTAAATCCG
rJMFF012K23+          GCTCTTCAAGCGTATGCTAAGAAGAAGAGTTCTTAATTTATTTATTGCAAATTAAATCCG
                      ____________________________________________________________
consensus             GCTCTTCAAGCGTATGCTAAGAAGAAGAGTTCTTAATTTATTTATTGCAAATTAAATCCG
 
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rJMSF048E19+          CATATAATACTTTTGCTGTTTTGTGTTTGTTTTATATTTTAATTTCCATATAAAGTACTA
rJMFF012K23+          CATATAATACTTTTGCTGTTTTGTGTTTGTTTTATATTTTAATTTCCATATAAAGTACTA
                      ____________________________________________________________
consensus             CATATAATACTTTTGCTGTTTTGTGTTTGTTTTATATTTTAATTTCCATATAAAGTACTA
 
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rJMSF048E19+          AAGTACGATGAAATGTGTATTTTATTTGATTTATGGTGTTTTTAGGGACAATTAACGTTG
rJMFF012K23+          AAGTACGATGAAATGTGTATTTTATTTGATTTATGGTGTTTTTAGGGACAATTAACGTTG
                      ____________________________________________________________
consensus             AAGTACGATGAAATGTGTATTTTATTTGATTTATGGTGTTTTTAGGGACAATTAACGTTG
 
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rJMSF048E19+          TATTATAGAATTTTCAG                                           
rJMFF012K23+          TATTATAGAATTTTCAGTTGTATTACTGTGTATTTGCTGCGATACTCGGAATAAATATCA
                      ____________________________________________________________
consensus             TATTATAGAATTTTCAGTTGTATTACTGTGTATTTGCTGCGATACTCGGAATAAATATCA