Contig 012254:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012B06Sequence505013231 (2)ref|XP_009607949.1|6e-07PREDICTED: probable receptor-like protein kinase At1g80640 [Nicotiana tomentosi765012254 (2)ref|XP_011073360.1|2e-117PREDICTED: probable receptor-like protein kinase At1g80640 isoform X2 [Sesamum
JMSF006B19Sequence353009275 (20)gb|AFG47248.1|3e-55hypothetical protein 2_207_02, partial [Pinus taeda]332012254 (2)ref|XP_009773864.1|9e-46PREDICTED: probable receptor-like protein kinase At1g80640 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMFF012B06+                         CGTGGATCAACTTTAAGTTGGCCTCTCCGAATGAAAATTGCTTTG
                      ____________________________________________________________
consensus                            CGTGGATCAACTTTAAGTTGGCCTCTCCGAATGAAAATTGCTTTG
 
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rJMFF012B06+          GATATTGCAAGAGGATTAGAATACCTTCACGAGCGTTGCAACCCCCCTGTGATCCATAGG
                      ____________________________________________________________
consensus             GATATTGCAAGAGGATTAGAATACCTTCACGAGCGTTGCAACCCCCCTGTGATCCATAGG
 
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rJMFF012B06+          CATCTCAAATCGTCTAATATTCTTCTTGATTCCAGCTTCAACGCAAAGATTTCTGATTTT
                      ____________________________________________________________
consensus             CATCTCAAATCGTCTAATATTCTTCTTGATTCCAGCTTCAACGCAAAGATTTCTGATTTT
 
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rJMFF012B06+          GGCCTTTCTGTAACTGGCGGAAACCTAAGCAAGAACATAACCAAGATTTCGGGATCACTG
                      ____________________________________________________________
consensus             GGCCTTTCTGTAACTGGCGGAAACCTAAGCAAGAACATAACCAAGATTTCGGGATCACTG
 
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rJMFF012B06+          GGTTATCTTGCTCCAGAGTATCTCTTAGACGGTAAACTAACTGATAAGAGTGATGTGTAT
                      ____________________________________________________________
consensus             GGTTATCTTGCTCCAGAGTATCTCTTAGACGGTAAACTAACTGATAAGAGTGATGTGTAT
 
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rJMFF012B06+          GGTTTTGGCATTATTCTTCTAGAGCTTTTGATGGGTAAAAGGCCAGTGGAGAAAGTGGGA
                      ____________________________________________________________
consensus             GGTTTTGGCATTATTCTTCTAGAGCTTTTGATGGGTAAAAGGCCAGTGGAGAAAGTGGGA
 
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rJMFF012B06+          GAAACTAAGTGCCAATCAATAGTTACATGGGCTATGCCCCAGCTTACGGACCGATCAAAG
                      ____________________________________________________________
consensus             GAAACTAAGTGCCAATCAATAGTTACATGGGCTATGCCCCAGCTTACGGACCGATCAAAG
 
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rJMSF006B19+                                 GATCAGAAACACAATGGATGTTAAGCATTTATATCAG
rJMFF012B06+          CTTCCGAATATTGTTGACCCTACGATCAGGAACACAATGGATGTTAAGCATTTATATCAG
                      ____________________________________________________________
consensus             CTTCCGAATATTGTTGACCCTACGATCAGGAACACAATGGATGTTAAGCATTTATATCAG
 
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rJMSF006B19+          GTTGCGGCTGTAGCTGTGTTATGTGTGCAACCGGAGCCAAGCTATAGGCCATTGATAAC 
rJMFF012B06+          GTTGCGGCTGTAGCTGTGTTATGTGTGCAACCGGAGCCAAGCTATAGGCCATTGATAACT
                      ____________________________________________________________
consensus             GTTGCGGCTGTAGCTGTGTTATGTGTGCAACCGGAGCCAAGCTATAGGCCATTGATAACT
 
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rJMFF012B06+          GATGTACTACACTCCTTCATTCCACTTGTACCAAATGAACTCGGGGGGTCGCTTAGGGTA
                      ____________________________________________________________
consensus             GATGTACTACACTCCTTCATTCCACTTGTACCAAATGAACTCGGGGGGTCGCTTAGGGTA
 
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rJMFF012B06+          GTGGATTCTACTCCCCATTGCTCATAGGAGTCATAGTTGTACCATACTTTGTATTCCCAA
                      ____________________________________________________________
consensus             GTGGATTCTACTCCCCATTGCTCATAGGAGTCATAGTTGTACCATACTTTGTATTCCCAA
 
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rJMFF012B06+          AAGGATTGAAAATCAATGGAAGATCTTGTGTTTCCTGTATTCTTGGTTACAGATCTCCCA
                      ____________________________________________________________
consensus             AAGGATTGAAAATCAATGGAAGATCTTGTGTTTCCTGTATTCTTGGTTACAGATCTCCCA
 
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rJMFF012B06+          AATGTGGTTTTTTGCTATGTGTTTAGAGTAGTGACACATGACAATGATATCTGTTGCTTT
                      ____________________________________________________________
consensus             AATGTGGTTTTTTGCTATGTGTTTAGAGTAGTGACACATGACAATGATATCTGTTGCTTT