Contig 012249:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010H10Sequence564012249 (6)ref|XP_009770186.1|220PREDICTED: uncharacterized protein LOC104220920 [Nicotiana sylvestris]707012249 (6)ref|XP_004229986.1|229PREDICTED: uncharacterized protein LOC101253024 [Solanum lycopersicum]
JMFF010M24Sequence588012249 (6)ref|XP_004229986.1|166PREDICTED: uncharacterized protein LOC101253024 [Solanum lycopersicum]
JMFF010N11Sequence301012249 (6)ref|XP_009607474.1|63.2PREDICTED: uncharacterized protein LOC104101687 [Nicotiana tomentosiformis]
JMFF023E13Sequence664012249 (6)ref|XP_004229986.1|215PREDICTED: uncharacterized protein LOC101253024 [Solanum lycopersicum]
JMFN025F08Sequence602012249 (6)ref|XP_009607474.1|228PREDICTED: uncharacterized protein LOC104101687 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF010H10-             CTCTTTTTCTTTTTCTTAGCACTCACACTTAGCTTTAATTTGTGTGTCTCTGTCTGGG
                      ____________________________________________________________
consensus               CTCTTTTTCTTTTTCTTAGCACTCACACTTAGCTTTAATTTGTGTGTCTCTGTCTGGG
 
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JMFF010H10-           CTCTGGGATCCCATCCCATCCCATCCCATCCCATCCTACGTTTCTTTCTCACTGCAATTT
JMFN025F08-                                               TACGTTTCTTTCTCACTGCAATTT
                      ____________________________________________________________
consensus             CTCTGGGATCCCATCCCATCCCATCCCATCCCATCCTACGTTTCTTTCTCACTGCAATTT
 
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JMFF010H10-           TACTTTCCTCTCCGCAATCCATCTATCAATTCTTGATTAATTTCCATGTTTGATCCGTAT
JMFN025F08-           TACTTTCCTCTCCGCAATCCATCTATCAATTCTTGATTAATTTCCATGTTTGATCCGTAT
                      ____________________________________________________________
consensus             TACTTTCCTCTCCGCAATCCATCTATCAATTCTTGATTAATTTCCATGTTTGATCCGTAT
 
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JMFF010H10-           AGATCTAAGCCTAGCCGTCGCGGCAGGACCAACTTAGCTTCATGTGTAGTCGCCACCGTT
JMFN025F08-           AGATCTAAGCCTAGCCGTCGCGGCAGGACCAACTTAGCTTCATGTGTAGTCGCCACCGTT
                      ____________________________________________________________
consensus             AGATCTAAGCCTAGCCGTCGCGGCAGGACCAACTTAGCTTCATGTGTAGTCGCCACCGTT
 
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JMFF010H10-           TTCTTGCTTTTTGTCGCCGCCATCATCGTCACAGTCTACTTCTTCGTCTTCAAGCCCAAG
JMFN025F08-           TTCTTGCTTTTTGTCGCCGCCATCATCGTCACAGTCTACTTCTTCGTCTTCAAGCCCAAG
rJMFF023E13+                                                                CCCAAG
rJMFF010H10+                  TTTTGTCGCCGCCATCATCGTCACAGTCTACTTNTTCGTCTTCAAGCCCAAG
                      ____________________________________________________________
consensus             TTCTTGCTTTTTGTCGCCGCCATCATCGTCACAGTCTACTTCTTCGTCTTCAAGCCCAAG
 
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JMFF010H10-           TCACCCAGAATAGCAGTCGACGCCGTGCGATTCCCCACCTTTTCCATCTCCAACGGCACC
JMFN025F08-           TCACCCAGAATAGCAGTCGACGCCGTGCGATTCCCCACCTTTTCCATCTCCAACGGCACC
rJMFF023E13+          TCACCCAGAATAGCAGTCGACGCCGTGCGATTCCCCACCTTTTCCATCTCCAACGGCACC
rJMFF010H10+          TCACCCAGAATAGCAGTNGACGCCGTGCGATTCCCCACCTTTTCCATCTCCAACGGCACC
                      ____________________________________________________________
consensus             TCACCCAGAATAGCAGTCGACGCCGTGCGATTCCCCACCTTTTCCATCTCCAACGGCACC
 
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JMFF010H10-           GTCAACTTCACCTTCCTCCAGTACGTCTCCGTCACCAATCCCAACCGCGACCAGTTCACT
JMFN025F08-           GTCAACTTCACCTTCCTCCAGTACGTCTCCGTCACCAATCCCAACCGCGACCAGTTCACT
rJMFF023E13+          GTCAACTTCACCTTCCTCCAGTACGTCTCCGTCACCAATCCCAACCGCGACCAGTTCACT
rJMFF010H10+          GTCAACTTCACCTTCCTCCAGTACGTCTCCGTCACCAATCCCAACCGCGACCAGTTCACT
rJMFF010M24+                     CTTCCTCCAGTACGTCTCCGTCACCAATCCCAACCGCGACCAGTTCACT
                      ____________________________________________________________
consensus             GTCAACTTCACCTTCCTCCAGTACGTCTCCGTCACCAATCCCAACCGCGACCAGTTCACT
 
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JMFF010H10-           CACTATGACAGCTCCCTCCAGCTTAGCTATTCCGGCCAGCCCGTCGGCGTCGTCTTCATT
JMFN025F08-           CACTATGACAGCTCCCTCCAGCTTAGCTATTCCGGCCAGCCCGTCGGCGTCGTCTTCATT
rJMFF023E13+          CACTATGACAGCTCCCTCCAGCTTAGCTATTCCGGCCAGCCCGTCGGCGTCGTCTTCATT
rJMFF010H10+          CACTATGACAGCTCCCTCCAGCTTAGCTATTCCGGCCAGCCCGTCGGCGTCGTCTTCATT
rJMFF010M24+          CACTATGACAGCTCCCTCCAGNTTAGCTATTCCGGCCAGCCCGTCGGCGTCGTCTTCATT
                      ____________________________________________________________
consensus             CACTATGACAGCTCCCTCCAGCTTAGCTATTCCGGCCAGCCCGTCGGCGTCGTCTTCATT
 
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JMFF010H10-           CCCGCCGGAAAGATTGACGCCGGGCGGACCCAGCACATGTCCGCCAAGTTCAATGTCCAG
JMFN025F08-           CCCGCCGGAAAGATTGACGCCGGGCGGACCCAGCACATGTCCGCCAAGTTCAATGTCCAG
rJMFF010N11+                                  CGGACCCAGCACATGTCCGCCAAGTTCAATGTCCAG
rJMFF023E13+          CCCGCCGGAAAGATTGACGCCGGGCGGACCCAGCACATGTCCGCCAAGTTCAATGTCCAG
rJMFF010H10+          CCCGCCGGAAAGATTGACGCCGGGCGGACCCAGCACATGTCCGCCAAGTTCAATGTCCAG
rJMFF010M24+          CCCGCCGGAAAGATTGACGCCGGGCGGACCCAGCACATGTCCGCCAAGTTCAATGTCCAG
                      ____________________________________________________________
consensus             CCCGCCGGAAAGATTGACGCCGGGCGGACCCAGCACATGTCCGCCAAGTTCAATGTCCAG
 
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JMFF010H10-           TCCTACCCCTTGCCGTCGGCGCTGAA                                  
JMFN025F08-           TCCTACCCCTTGCCGTCGGCGCTGAAGGCCGCTGGGATTGTTTCCTCCTCACAGCTGGCG
rJMFF010N11+          TCNTACCCCNTGCCGTCGGCGNTGAAGGCCGCTGGGATTGTTTCCTCNTCNCAGCTGGCG
rJMFF023E13+          TCCTACCCCTTGCCGTCGGCGCTGAAGGCCGCTGGGATTGTTTCCTCCTCACAGCTGGCG
rJMFF010H10+          TCCTACCCCTTGCCGTCGGCGCTGAAGGCCGCTGGGATTGTTTCCTCCTCACAGCTGGCG
rJMFF010M24+          TCCTACCCCTTGCCGTCGGCGCTGAAGGCCGCTGGGATTGTTTCCTCCTCACAGCTGGCG
                      ____________________________________________________________
consensus             TCCTACCCCTTGCCGTCGGCGCTGAAGGCCGCTGGGATTGTTTCCTCCTCACAGCTGGCG
 
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JMFN025F08-           GCGGCGGCTAGCGGTGGAGGAATGGGAATGGGACCCACGATGGTGATAGAAACTAGGATG
rJMFF010N11+          GCGGCGGNTAGCGGTGGAGGAATGGGAATGGGACCCANGATGGTGATAGAAANTAGGATG
rJMFF023E13+          GCGGCGGCTAGCGGTGGAGGAATGGGAATGGGACCCACGATGGTGATAGAAACTAGGATG
rJMFF010H10+          GCGGCGGCTAGCGGTGGAGGAATGGGAATGGGACCCACGATGGTGATAGAAACTAGGATG
rJMFF010M24+          GCGGCGGCTAGCGGTGGAGGAATGGGAATGGGACCCACGATGGTGATAGAAACTAGGATG
                      ____________________________________________________________
consensus             GCGGCGGCTAGCGGTGGAGGAATGGGAATGGGACCCACGATGGTGATAGAAACTAGGATG
 
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JMFN025F08-           AAGCTGGTGGGGAGGGTAAGAGTGCTGAAGGTGTTGAC                      
rJMFF010N11+          AAGCTGGTGGGGAGGGTAAGAGTGCTGAAGGTGTNGACGCATAGAGTGGCGAGCAAGGTG
rJMFF023E13+          AAGCTGGTGGGGAGGGTAAGAGTGCTGAAGGTGTTGACGCATAGAGTGGCGAGCAAGGTG
rJMFF010H10+          AAGCTGGTGGGGAGGGTAAGAGTGCTGAAGGTGTTGACGCATAGAGTGGCGAGCAAGGTG
rJMFF010M24+          AAGCTGGTGGGGAGGGTAAGAGTGCTGAAGGTGTTGACGCATAGAGTGGCGAGCAAGGTG
                      ____________________________________________________________
consensus             AAGCTGGTGGGGAGGGTAAGAGTGCTGAAGGTGTTGACGCATAGAGTGGCGAGCAAGGTG
 
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rJMFF010N11+          AGATNCGGGGTGGTGATTCAAGTCAGTAGTGGATCATGTAGTGGGCATCCATTGNTGAAT
rJMFF023E13+          AGATGCGGGGTGGTGATTCAAGTCAGTAGTGGATC-TGTACTGGGCATCCATTGCTGAAT
rJMFF010H10+          AGATGCGGGGTGGTGATTCAAGTCAGTAGTGGATC-TGTACTGGGCATCCATTGCTGAAT
rJMFF010M24+          AGATGCGGGGTGGTGATTCAAGTCAGTAGTGGATC-TGTACTGGGCATCCATTGCTGAAT
                      ____________________________________________________________
consensus             AGATGCGGGGTGGTGATTCAAGTCAGTAGTGGATC-TGTACTGGGCATCCATTGCTGAAT
 
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rJMFF010N11+          CNTGCAGCAGCCTCAGCCCTCAGCC                                   
rJMFF023E13+          CCTGCAGCAGCCTCAGCCCTCAGCCTCTACTCTGCTGCATTAATGTTTATCCTTAATGTA
rJMFF010H10+          CCTGCAGCAGCCTCAGCCCTCAGCCTCTACTCTGCTGCATTAATGTTTATCCTTAATGTA
rJMFF010M24+          CCTGCAGCAGCCTCAGCCCTCAGCCTCTACTCTGCTGCATTAATGTTTATCCTTAATGTA
                      ____________________________________________________________
consensus             CCTGCAGCAGCCTCAGCCCTCAGCCTCTACTCTGCTGCATTAATGTTTATCCTTAATGTA
 
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rJMFF023E13+          CAAGTAATTAAATCCAGCAAACAAAGGGAATTAATTACTTTGCGTTTCTCCTTCTATAGA
rJMFF010H10+          CAAGTAATTAAATCCAGCAAACAAAGGGAATTAATTACTTTGCGTTTCTCCTTCTATAGA
rJMFF010M24+          CAAGTAATTAAATCCAGCAAACAAAGGGAATTAATTACTTTGCGTTTCTCCTTCTATAGA
                      ____________________________________________________________
consensus             CAAGTAATTAAATCCAGCAAACAAAGGGAATTAATTACTTTGCGTTTCTCCTTCTATAGA
 
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rJMFF023E13+          TAGATACTAGATAATTGATGTAAGATATACTGTAAGATTGAAGATCT             
rJMFF010H10+          TAGATACTAGATAATTGATGTAAGATATACTGTAAGATTGAAGATCTGCAAAA       
rJMFF010M24+          TAGATACTAGATAATTGATGTAAGATATACTGTAAGATTGAAGATCTGCAAAAGCACAAG
                      ____________________________________________________________
consensus             TAGATACTAGATAATTGATGTAAGATATACTGTAAGATTGAAGATCTGCAAAAGCACAAG