Contig 012246:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF016O24+                                     ATCGTCACAAGGATCGAAGTAAAGACAAGGATA
                      ____________________________________________________________
consensus                                        ATCGTCACAAGGATCGAAGTAAAGACAAGGATA
 
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rJMSF016O24+          AAGATAAAAAGAAAGATAAAAGTGGCCATCATGATTCTGGTGCCGAGCATTCAAAGAAGC
                      ____________________________________________________________
consensus             AAGATAAAAAGAAAGATAAAAGTGGCCATCATGATTCTGGTGCCGAGCATTCAAAGAAGC
 
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rJMSF016O24+          ATCATGAGAAGAAAAGGAAGCATGATGGAGAGGAAGATATCAATGATCACAAGCACAAGA
                      ____________________________________________________________
consensus             ATCATGAGAAGAAAAGGAAGCATGATGGAGAGGAAGATATCAATGATCACAAGCACAAGA
 
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rJMSF016O24+          AAAGCAAGCACAAGAGCTCAAAAATTGATGAAATGGGTGCAATAAAGGTAGCAGGCTAAC
rJMFF009I14+                                 ATTGATGAAATGGGTGCAATAAAGGTAGCAGGCTAAC
                      ____________________________________________________________
consensus             AAAGCAAGCACAAGAGCTCAAAAATTGATGAAATGGGTGCAATAAAGGTAGCAGGCTAAC
 
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rJMSF016O24+          AAGCAGCATGACTGGTGTCCAATGTTTTTTGTCCTCAGATTTTGCAGTTGAGAATATGAA
rJMFF009I14+          AAGCAGCATGACTGGTGTCCAATGTTTTTTGTCCTCAGATTTTGCAGTTGAGAATATGAA
                      ____________________________________________________________
consensus             AAGCAGCATGACTGGTGTCCAATGTTTTTTGTCCTCAGATTTTGCAGTTGAGAATATGAA
 
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rJMSF016O24+          GGGAACCTTCTACTAACTATTATGAAATTTTTCTGAGAATAGTGTATGGGCTAATGAAAG
rJMFF009I14+          GGGAACCTTCTACTAACTATTATGAAATTTTTCTGAGAATAGTGTATGGGCTAATGAAAG
                      ____________________________________________________________
consensus             GGGAACCTTCTACTAACTATTATGAAATTTTTCTGAGAATAGTGTATGGGCTAATGAAAG
 
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rJMSF016O24+          ATTGCTGATAACGTGAACTGTCCTGTTGAAGTAGATTAACGGAGTTTCAACCTGTGGAAA
rJMFF009I14+          ATTGCTGATAACGTGAACTGTCCTGTTGAAGTAGATTAACGGAGTTTCAACCTGTGGAAA
                      ____________________________________________________________
consensus             ATTGCTGATAACGTGAACTGTCCTGTTGAAGTAGATTAACGGAGTTTCAACCTGTGGAAA
 
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rJMSF016O24+          CAAACCATGCATCATGGAATATGGTCCCTTCATATGGCACTCGTGACAGATTGTTTTTCA
rJMFF009I14+          CAAACCATGCATCATGGAATATGGTCCCTTCATATGGCACTCGTGACAGATTGTTTTTCA
                      ____________________________________________________________
consensus             CAAACCATGCATCATGGAATATGGTCCCTTCATATGGCACTCGTGACAGATTGTTTTTCA
 
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rJMSF016O24+          TCTGTTATCCTCCTCGCTTAATCTAATCTAAAGGCTTACTATTAGGCGAACCAATTGGAG
rJMFF009I14+          TCTGTTATCCTCCTCGCTTAATCTAATCTAAAGGCTTACTATTAGGCGAACCAATTGGAG
                      ____________________________________________________________
consensus             TCTGTTATCCTCCTCGCTTAATCTAATCTAAAGGCTTACTATTAGGCGAACCAATTGGAG
 
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rJMSF016O24+          CTATTGGGTAGAAGGCAGAGGATGAGATGACTATGAGTCTCTATATGTCATTTATTATTT
rJMFF009I14+          CTATTGGGTAGAAGGCAGAGGATGAGATGACTATGAGTCTCTATATGTCATTTATTATTT
                      ____________________________________________________________
consensus             CTATTGGGTAGAAGGCAGAGGATGAGATGACTATGAGTCTCTATATGTCATTTATTATTT
 
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rJMSF016O24+          TCCATTAAGGTTGAGAATCTGGTTTCTGATCTTCAATTTGTAGATATTTATTAGGTTTCT
rJMFF009I14+          TCCATTAAGGTTGAGAATCTGGTTTCTGATCTTCAATTTGTAGATATTTATTAGGTTTCT
                      ____________________________________________________________
consensus             TCCATTAAGGTTGAGAATCTGGTTTCTGATCTTCAATTTGTAGATATTTATTAGGTTTCT
 
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rJMSF016O24+          TTTTCATTTTTGGGGTGGGGGATTTGTTTCTAGTATGGGTTCTCACATGTACTCCTATAG
rJMFF009I14+          TTTTCATTTTTGGGGTGGGGGATTTGTTTCTAGTATGGGTTCTCACATGTACTCCTATAG
                      ____________________________________________________________
consensus             TTTTCATTTTTGGGGTGGGGGATTTGTTTCTAGTATGGGTTCTCACATGTACTCCTATAG
 
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rJMSF016O24+          GACTATGATTGTTGCAACAGATGTTCTTGT                              
rJMFF009I14+          GACTATGATTGTTGCAACAGATGTTCTTGTTGTACATACTTCTAGAAAGAAATCAAAATG
                      ____________________________________________________________
consensus             GACTATGATTGTTGCAACAGATGTTCTTGTTGTACATACTTCTAGAAAGAAATCAAAATG
 
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rJMFF009I14+          ATGCCATTGTTTCTTATGCCAAATCTTGGAGAATGTTCTGCTTGGAGCTTTAATGAGCCC
                      ____________________________________________________________
consensus             ATGCCATTGTTTCTTATGCCAAATCTTGGAGAATGTTCTGCTTGGAGCTTTAATGAGCCC
 
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rJMFF009I14+          AAATCTTAGGTGGACCTGTGTTAACATTGTAAAGTGGACTTGAGTCTAAATGTTCATAAT
                      ____________________________________________________________
consensus             AAATCTTAGGTGGACCTGTGTTAACATTGTAAAGTGGACTTGAGTCTAAATGTTCATAAT