Contig 012244:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008I13Sequence501009588 (3)ref|XP_009623706.1|2e-45PREDICTED: probable glutamate carboxypeptidase 2 [Nicotiana tomentosiformis]767012244 (3)emb|CDP10550.1|8e-47unnamed protein product [Coffea canephora]
JMFF009D12Sequence502009588 (3)ref|XP_009623706.1|3e-44PREDICTED: probable glutamate carboxypeptidase 2 [Nicotiana tomentosiformis]727012244 (3)emb|CDP10550.1|2e-45unnamed protein product [Coffea canephora]
JMSF052M02Sequence650009588 (3)ref|XP_009623706.1|7e-45PREDICTED: probable glutamate carboxypeptidase 2 [Nicotiana tomentosiformis]816012244 (3)emb|CDP10550.1|2e-47unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF052M02+                     TCTTATGCAAGACAGTTGCTGGGGTATACGCATATCTTGACTGAAAAAT
                      ____________________________________________________________
consensus                        TCTTATGCAAGACAGTTGCTGGGGTATACGCATATCTTGACTGAAAAAT
 
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rJMSF052M02+          TGGGAGGGAGCTTTTCGTTGCATCCAATAACGGATGCCATTCAAGAATTTATGGCTGCAG
                      ____________________________________________________________
consensus             TGGGAGGGAGCTTTTCGTTGCATCCAATAACGGATGCCATTCAAGAATTTATGGCTGCAG
 
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rJMFF009D12+                                                            AAACTGAGCG
rJMSF052M02+          CTACAGAAATCGAGGAAGAAGTGAAGGTTCTAGAAAAGATGCTTTCTTGTAAACTGAGCG
rJMFF008I13+                                                            AAACTGAGCG
                      ____________________________________________________________
consensus             CTACAGAAATCGAGGAAGAAGTGAAGGTTCTAGAAAAGATGCTTTCTTGTAAACTGAGCG
 
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rJMFF009D12+          AGGATGAAACCATGGACGACGGCCTTTTTATTCTGAAGAGGCGGATGTTAAATGATCGAT
rJMSF052M02+          AGGATGAAACCATGGACGACGGCCTTTTTATTCTGAAGAGGCGGATGTTAAATGATCGAT
rJMFF008I13+          AGGATGAAACCATGGACGACGGCCTTTTTATTCTGAAGAGGCGGATGTTAAATGATCGAT
                      ____________________________________________________________
consensus             AGGATGAAACCATGGACGACGGCCTTTTTATTCTGAAGAGGCGGATGTTAAATGATCGAT
 
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rJMFF009D12+          TGGTATTTGCCGAAAGGGGTTTCTTAGATGGAGAAGGGCTTCCAGGAAAGCAATGGTTCA
rJMSF052M02+          TGATATTTGCCGAAAGGGGTTTCTTAGATGGAGAAGGGCTTCCAGGAAAGCAATGGTTCA
rJMFF008I13+          TGATATTTGCCGAAAGGGGTTTCTTAGATGGAGAAGGGCTTCCAGGAAAGCAATGGTTCA
                      ____________________________________________________________
consensus             TGATATTTGCCGAAAGGGGTTTCTTAGATGGAGAAGGGCTTCCAGGAAAGCAATGGTTCA
 
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rJMFF009D12+          AGCATCTTGTTTATGGGCCTTGTACTAACCATGAAAGCAATCTAGATTTCTTCCCTGGAA
rJMSF052M02+          AGCATCTTGTTTATGGGCCTTGTACTAACCATGAAAGCAATCTAGATTTCTTCCCTGGAA
rJMFF008I13+          AGCATCTTGTTTATGGGCCTTGTACTAACCATGAAAGCAATCTAGATTTCTTCCCTGGAA
                      ____________________________________________________________
consensus             AGCATCTTGTTTATGGGCCTTGTACTAACCATGAAAGCAATCTAGATTTCTTCCCTGGAA
 
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rJMFF009D12+          TTGTCGATGCCATAGCTGGATCCACTGGCATGAATAAGATCGAAAGGGAAGGTGTGATTC
rJMSF052M02+          TTGTCGATGCCATAGCTGGATCCACTGGCATGAATAAGATCGAAAGGGAAGGTGTGATTC
rJMFF008I13+          TTGTCGATGCCATAGCTGGATCCACTGGCATGAATAAGATCGAAAGGGAAGGTGTGATTC
                      ____________________________________________________________
consensus             TTGTCGATGCCATAGCTGGATCCACTGGCATGAATAAGATCGAAAGGGAAGGTGTGATTC
 
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rJMFF009D12+          GACATGAGATCTGGCGAGTTGGGAGGGCTATTCAACGAGCTGCCTATGCTCTCAGAGGCC
rJMSF052M02+          GACATGAGATCTGGCGAGTTGGGAGGGCTATTCAACGAGCTGCCTATGCTCTCAGAGGCC
rJMFF008I13+          GACATGAGATCTGGCGAGTTGGGAGGGCTATTCAACGAGCTGCCTATGCTCTCAGAGGCC
                      ____________________________________________________________
consensus             GACATGAGATCTGGCGAGTTGGGAGGGCTATTCAACGAGCTGCCTATGCTCTCAGAGGCC
 
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rJMFF009D12+          AACTAACCTGAAGTTACAGGCATTACACAAATATTCAGTCGGTGCCCTCAGTTCCGTGTT
rJMSF052M02+          AACTAACCTGAAGTTACAGGCATTACACAAATATTCAGTCGGTGCCCTCAGTTCCGTGTT
rJMFF008I13+          AACTAACCTGAAGTTACAGGCATTACACAAATATTCAGTCGGTGCCCTCAGTTCCGTGTT
                      ____________________________________________________________
consensus             AACTAACCTGAAGTTACAGGCATTACACAAATATTCAGTCGGTGCCCTCAGTTCCGTGTT
 
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rJMFF009D12+          AATTCAGCCCCTCAGCAACACGTCTTACCTATAAAATGTTAAATTGGCAGATGGCCAATC
rJMSF052M02+          AATTCAGCCCCTCAGCAACACGTCTTACCTATAAAATGTTAAATTGGCAGATGGCCAATC
rJMFF008I13+          AATTCAGCCCCTCAGCAACACGTCTTACCTATAAAATGTTAAATTGGCAGATGGCCAATC
                      ____________________________________________________________
consensus             AATTCAGCCCCTCAGCAACACGTCTTACCTATAAAATGTTAAATTGGCAGATGGCCAATC
 
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rJMFF009D12+          TCCTATTTGGCAATTACTCGACCGAATTTTGTCCTGTCTGGCAGGATTTTTGTTTCGGTT
rJMSF052M02+          TCCTATTTGGCAATTACTCGACCGAATTTTGTCCTGTCTGGCAGGATTTTTGTTTCGGTT
rJMFF008I13+          TCCTATTTGGCAATTACTCGACCGAATTTTGTCCTGTCTGGCAGGATTTTTGTTTCGGTT
                      ____________________________________________________________
consensus             TCCTATTTGGCAATTACTCGACCGAATTTTGTCCTGTCTGGCAGGATTTTTGTTTCGGTT
 
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rJMFF009D12+          GCAGGCCAAATGACAATTTCCAAATATATTAACATTTTGTGTCACACCTATGTGTGCTAT
rJMSF052M02+          GCAGGCCAAATGACAATTTCCAAATATATTAACATTTTGTGTCACACCTATGTGTGCTAT
rJMFF008I13+          GCAGGCCAAATGACAATTTCCAAATATATTAACATTTTGTGTCACACCTATGTGTGCTAT
                      ____________________________________________________________
consensus             GCAGGCCAAATGACAATTTCCAAATATATTAACATTTTGTGTCACACCTATGTGTGCTAT
 
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rJMFF009D12+          GTTTTTGCTCCATATGTTTTAGGTTCATTTGATAATCATGGATCTTAGCACGTCTACTCC
rJMSF052M02+          GTTTTTGCTCCATATGTTTTAGGTTCATTTGATAATCATGGATCTTAGCACGTCTACTCC
rJMFF008I13+          GTTTTTGCTCCATATGTTTTAGGTTCATTTGATAATCATGGATCTTAGCACGTCTACTCC
                      ____________________________________________________________
consensus             GTTTTTGCTCCATATGTTTTAGGTTCATTTGATAATCATGGATCTTAGCACGTCTACTCC
 
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rJMFF009D12+          ACGTGTTTAGGATCAACTAGTTTGTATATTGTAAATGAATAACATT              
rJMSF052M02+          ACGTGTTTAGGATCAACTAGTTTGTATATTGTAAATGAATAACATT              
rJMFF008I13+          ACGTGTTTAGGATCAACTAGTTTGTATATTGTAAATGAATAACATTTTGTTTATAAATTA
                      ____________________________________________________________
consensus             ACGTGTTTAGGATCAACTAGTTTGTATATTGTAAATGAATAACATTTTGTTTATAAATTA