Contig 012243:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007C14Sequence575003080 (2)747012243 (3)emb|CDP14479.1|4e-86unnamed protein product [Coffea canephora]
JMFF008F24Sequence578003080 (2)730012243 (3)emb|CDP14479.1|2e-81unnamed protein product [Coffea canephora]
JMFS168F05Sequence618012243 (3)ref|XP_009612457.1|3e-106PREDICTED: uncharacterized protein LOC104105773 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS168F05-                         GTCAACATCCATGTCTGGCTTTGGCAATCCTATTGGATACAAATGC
                      ____________________________________________________________
consensus                           GTCAACATCCATGTCTGGCTTTGGCAATCCTATTGGATACAAATGC
 
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JMFS168F05-           TGTGGGAGTAGATGAGTCTGGAACAGAGGAAGACCAAGCAGCATTTATGAAAGAACTGGA
                      ____________________________________________________________
consensus             TGTGGGAGTAGATGAGTCTGGAACAGAGGAAGACCAAGCAGCATTTATGAAAGAACTGGA
 
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JMFS168F05-           AACCTTCCATAAAGAAAGGTGCTTGGAATTCAAGCCCCCACGGTTTTATGGAGAGCCATT
                      ____________________________________________________________
consensus             AACCTTCCATAAAGAAAGGTGCTTGGAATTCAAGCCCCCACGGTTTTATGGAGAGCCATT
 
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JMFS168F05-           GAATTGCCTCAAGCTATGGAGAGCAGTGATCAGACTTGGTGGCTATGAACAGGTGACATC
                      ____________________________________________________________
consensus             GAATTGCCTCAAGCTATGGAGAGCAGTGATCAGACTTGGTGGCTATGAACAGGTGACATC
 
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JMFS168F05-           ATGCAAGCTATGGCGGCAAGTAGGAGAATCATTTAAGCCTCCAAAGACATGTACTACTGT
                      ____________________________________________________________
consensus             ATGCAAGCTATGGCGGCAAGTAGGAGAATCATTTAAGCCTCCAAAGACATGTACTACTGT
 
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JMFS168F05-           CTCTTGGACATTCCGGTGTTTCTATGAAAAGGCACTGTTGGAATATGAAAAGTACAAGAT
                      ____________________________________________________________
consensus             CTCTTGGACATTCCGGTGTTTCTATGAAAAGGCACTGTTGGAATATGAAAAGTACAAGAT
 
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JMFS168F05-           GCGCAGCGGTGAGCTTCCTTTTGCTGACGCATCTTTTTCAGAGCCTTCTAGTACTGGTAA
                      ____________________________________________________________
consensus             GCGCAGCGGTGAGCTTCCTTTTGCTGACGCATCTTTTTCAGAGCCTTCTAGTACTGGTAA
 
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JMFS168F05-           CCCGGGTAATCAGGCATCAGGATCGGGTAGAGCAAGAAGAGATGCTGCAGCACGTGCTAT
                      ____________________________________________________________
consensus             CCCGGGTAATCAGGCATCAGGATCGGGTAGAGCAAGAAGAGATGCTGCAGCACGTGCTAT
 
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JMFS168F05-           GCAAGGTTGGCATTCTCAACGCCTTCTTGGAAATGGTGAGGTTGGAGATCCTATCATTAA
rJMFF007C14+                                          ATGGTGAGGTTGGAGATCCTATCATTAA
rJMFF008F24+                                                            CTATCATTAA
                      ____________________________________________________________
consensus             GCAAGGTTGGCATTCTCAACGCCTTCTTGGAAATGGTGAGGTTGGAGATCCTATCATTAA
 
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JMFS168F05-           GGACAAGAACTCAATTTCAACACCAAAACGCGAGAAACAACTCAAGAGTATTGGCTTGCT
rJMFF007C14+          GGACAAGAACTCAATTTCAACACCAAAACGCGAGAAACAACTCAAGAGTATTGGCTTGCT
rJMFF008F24+          GGACAAGAACTCAATTTCAACACCAAAACGCGAGAAACAACTCAAGAGTATTGGCTTGCT
                      ____________________________________________________________
consensus             GGACAAGAACTCAATTTCAACACCAAAACGCGAGAAACAACTCAAGAGTATTGGCTTGCT
 
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JMFS168F05-           AAAGCGCANAAAGCTGTCTCCTGTTGATAATG                            
rJMFF007C14+          AAAGCGCAAAAAGCTGTCTCCTGTTGATAATGTTGCCAAAGCCGCCACGCGCATGAAAAT
rJMFF008F24+          AAAGCGCAAAAAGCTGTCTCCTGTTGATAATGTTGCCAAAGCCGCCACGCGCATGAAAAT
                      ____________________________________________________________
consensus             AAAGCGCAAAAAGCTGTCTCCTGTTGATAATGTTGCCAAAGCCGCCACGCGCATGAAAAT
 
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rJMFF007C14+          ACCAAAAACACAGTCAGAATCAATGGTCGCTGATATTGGGGCTCCTGCTGACTGGGTGAA
rJMFF008F24+          ACCAAAAACACAGTCAGAATCAATGGTCGCTGATATTGGGGCTCCTGCTGACTGGGTGAA
                      ____________________________________________________________
consensus             ACCAAAAACACAGTCAGAATCAATGGTCGCTGATATTGGGGCTCCTGCTGACTGGGTGAA
 
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rJMFF007C14+          GATCAATGTACAGAAGACTAATGACTGCTTTGAAGTATATGCTTTAGTACCTGGCCTTTT
rJMFF008F24+          GATCAATGTACAGAAGACTAATGACTGCTTTGAAGTATATGCTTTAGTACCTGGCCTTTT
                      ____________________________________________________________
consensus             GATCAATGTACAGAAGACTAATGACTGCTTTGAAGTATATGCTTTAGTACCTGGCCTTTT
 
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rJMFF007C14+          GCGTGAGGAGGTTCGTGTACAGTCTGATCCAGCAGGACGCCTGGTTATATCTGGCCAGCC
rJMFF008F24+          GCGTGAGGAGGTTCGTGTACAGTCTGATCCAGCAGGACGCCTGGTTATATCTGGCCAGCC
                      ____________________________________________________________
consensus             GCGTGAGGAGGTTCGTGTACAGTCTGATCCAGCAGGACGCCTGGTTATATCTGGCCAGCC
 
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rJMFF007C14+          AGAACAACTGGATAATCCCTGGGGTGTCACTCCATTCAAAAAGGTAGTGAGCTTGCCCTC
rJMFF008F24+          AGAACAACTGGATAATCCCTGGGGTGTCACTCCATTCAAAAAGGTAGTGAGCTTGCCCTC
                      ____________________________________________________________
consensus             AGAACAACTGGATAATCCCTGGGGTGTCACTCCATTCAAAAAGGTAGTGAGCTTGCCCTC
 
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rJMFF007C14+          AAGAATTGACCCTCATCAGACATCTGCTGTCGTTACCCTGCATGGACAGTTATTTGTACG
rJMFF008F24+          AAGAATTGACCCTCATCAGACATCTGCTGTCGTTACCCTGCATGGACAGTTATTTGTACG
                      ____________________________________________________________
consensus             AAGAATTGACCCTCATCAGACATCTGCTGTCGTTACCCTGCATGGACAGTTATTTGTACG
 
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rJMFF007C14+          CGTGCCGTTTGAGCAATCAGATATATAAACTAGGAAAGCACTCCATCTTGGATAGTGAGT
rJMFF008F24+          CGTGCCGTTTGAGCAATCAGATATATAAACTAGGAAAGCACTCCATCTTGGATAGTGAGT
                      ____________________________________________________________
consensus             CGTGCCGTTTGAGCAATCAGATATATAAACTAGGAAAGCACTCCATCTTGGATAGTGAGT
 
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rJMFF007C14+          TTGACTTTTACATGGGGGAAATGGGTGCTGAGATCAAATTTTGTATTGCACAAATTCCTC
rJMFF008F24+          TTGACTTTTACATGGGGGAAATGGGTGCTGAGATCAAATTTTGTATTGCACAAATTCCTC
                      ____________________________________________________________
consensus             TTGACTTTTACATGGGGGAAATGGGTGCTGAGATCAAATTTTGTATTGCACAAATTCCTC
 
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rJMFF007C14+          TTTAGTACAAGACTTAGCTTGTGAATTTTCTTATTGTTCAGGAACTTGTATGCGTATGTA
rJMFF008F24+          TTTAGTACAAGACTTAGCTTGTGAATTTTCTTATTGTTCAGGAACTTGTATGCGTATGTA
                      ____________________________________________________________
consensus             TTTAGTACAAGACTTAGCTTGTGAATTTTCTTATTGTTCAGGAACTTGTATGCGTATGTA
 
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rJMFF007C14+          GATTAATTTCTTATACTTCCTGGCAGTTTATGATCATGATACCTTCCGGTGTAAAATAGG
rJMFF008F24+          GATTAATTTCTTATACTTCCTGGCAGTTTATGATCATGATACCTTCCGGTGTAAAATAGG
                      ____________________________________________________________
consensus             GATTAATTTCTTATACTTCCTGGCAGTTTATGATCATGATACCTTCCGGTGTAAAATAGG
 
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rJMFF007C14+          ACGATGCATATTTCCCCTAGAGACTAGAGTTTAGTTGTGACATTGC              
rJMFF008F24+          ACGATGCATATTTCCCCTAGAGACTAGAGTTTAGTTGTGACATTGCCATGGCAGTACATA
                      ____________________________________________________________
consensus             ACGATGCATATTTCCCCTAGAGACTAGAGTTTAGTTGTGACATTGCCATGGCAGTACATA