Contig 012242:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009F08+                                                TGAAATGCCTGTAGGGGAAGGT
                      ____________________________________________________________
consensus                                                   TGAAATGCCTGTAGGGGAAGGT
 
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rJMSF009F08+          ACACAAAGGGGTTGCAGCTGTGGATCAATCTTGCCTCCAAGGACAAAATGATTGAGCCAA
                      ____________________________________________________________
consensus             ACACAAAGGGGTTGCAGCTGTGGATCAATCTTGCCTCCAAGGACAAAATGATTGAGCCAA
 
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rJMSF009F08+          ATTATCAAGAACTGTTGAGTGCAGACATCCCAAGTGCAGAAAGCGATGGGGTTGAAGTAA
                      ____________________________________________________________
consensus             ATTATCAAGAACTGTTGAGTGCAGACATCCCAAGTGCAGAAAGCGATGGGGTTGAAGTAA
 
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JMFF008E15-                       GAGAGTCGATGGGCTTGAAGTCCCCGGTTTACACAAGAACTCCCACAA
rJMSF009F08+          AGATTATAGCAGGAGAGTCGATGGGCGTGAAGTCCCCGGTTTACACAAGAACTCCCACAA
rJMFF008E15+                      GAGAGTCGATGGGCTTGAAGTCCCCGGTTTACACAAGAACTCCCACAA
                      ____________________________________________________________
consensus             AGATTATAGCAGGAGAGTCGATGGGCTTGAAGTCCCCGGTTTACACAAGAACTCCCACAA
 
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JMFF008E15-           TGTACCTCGATTTCACTCTAAACCCGTCATCTCAACACCACCAAAGCATCCCAGAATCAT
rJMSF009F08+          TGTACCTCGATTTCACTCTAAACCCGTCATCTCAACACCACCAAAGCATCCCAGAATCAT
rJMFF008E15+          TGTACCTCGATTTCACTCTAAACCCGTCATCTCAACACCACCAAAGCATCCCAGAATCAT
                      ____________________________________________________________
consensus             TGTACCTCGATTTCACTCTAAACCCGTCATCTCAACACCACCAAAGCATCCCAGAATCAT
 
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JMFF008E15-           GGAACGCGTTTATCTACATCGTCGAAGGAGAGGGGGTGTTTGGCGTCCCGAATTCACAGC
rJMSF009F08+          GGAACGCGTTTATCTACATCGTCGAAGGAGAGGGGGTGTTTGGCGTCCCGAATTCACAGC
rJMFF008E15+          GGAACGCGTTTATCTACATCGTCGAAGGAGAGGGGGTGTTTGGCGTCCCGAATTCACAGC
                      ____________________________________________________________
consensus             GGAACGCGTTTATCTACATCGTCGAAGGAGAGGGGGTGTTTGGCGTCCCGAATTCACAGC
 
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JMFF008E15-           CTGCATCAGCTCACCACTGCTTGGTTTTGGGTCCGGGAGAGGGCCTGAGCGTATGGAACA
rJMSF009F08+          CTGCATCAGCTCACCACTGCTTGGTTTTGGGTCCGGGAGAGGGCCTGAGCGTATGGAACA
rJMFF008E15+          CTGCATCAGCTCACCACTGCTTGGTTTTGGGTCCGGGAGAGGGCCTGAGCGTATGGAACA
                      ____________________________________________________________
consensus             CTGCATCAGCTCACCACTGCTTGGTTTTGGGTCCGGGAGAGGGCCTGAGCGTATGGAACA
 
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JMFF008E15-           AGGGGTCCACACCCCTGAGATTCGTTTTGTTGGGTGGACAGCCACTCAACGAGCCGGTTG
rJMSF009F08+          AGGGGTCCACACCCCTGAGATTCGTTTTGTTGGGTGGACAGCCACTCAACGAGCCGGTTG
rJMFF008E15+          AGGGGTCCACACCCCTGAGATTCGTTTTGTTGGGTGGACAGCCACTCAACGAGCCGGTTG
                      ____________________________________________________________
consensus             AGGGGTCCACACCCCTGAGATTCGTTTTGTTGGGTGGACAGCCACTCAACGAGCCGGTTG
 
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JMFF008E15-           TTCAGTATGGTCCTTTTGTGATGAACACACAAGCTGAAATCGAGCAGACCTTCCAGGACT
rJMSF009F08+          TTCAGTATGGTCCTTTTGTGATGAACACACAAGCTGAAATCGAGCAGACCTTCCAGGACT
rJMFF008E15+          TTCAGTATGGTCCTTTTGTGATGAACACACAAGCTGAAATCGAGCAGACCTTCCAGGACT
                      ____________________________________________________________
consensus             TTCAGTATGGTCCTTTTGTGATGAACACACAAGCTGAAATCGAGCAGACCTTCCAGGACT
 
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JMFF008E15-           ACCATTACTACAAGAATGGTTTTGAGAAGGCAAGGCACTGGAGATCTCATTCTGGACACT
rJMSF009F08+          ACCATTACTACAAGAATGGTTTTGAGAAGGCAAGGCACTGGAGATCTCATTCTGGACACT
rJMFF008E15+          ACCATTACTACAAGAATGGTTTTGAGAAGGCAAGGCACTGGAGATCTCATTCTGGACACT
                      ____________________________________________________________
consensus             ACCATTACTACAAGAATGGTTTTGAGAAGGCAAGGCACTGGAGATCTCATTCTGGACACT
 
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JMFF008E15-           AGGAAGGCCCCCATAGCCCATGTAATGATAAGAAAAGCTCCAATAGAATTTCATTTGAGA
rJMSF009F08+          AGGAAGGCCCCCATAGCCCATGTAATGATAAGAAAAGCTCCAATAGAATTTCATTTGAGA
rJMFF008E15+          AGGAAGGCCCCCATAGCCCATGTAATGATAAGAAAAGCTCCAATAGAATTTCATTTGAGA
                      ____________________________________________________________
consensus             AGGAAGGCCCCCATAGCCCATGTAATGATAAGAAAAGCTCCAATAGAATTTCATTTGAGA
 
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JMFF008E15-           AAAAGAATAAAATACTAGACTGTGGAGGATTAGACTTTGTCTTCCATCATGTCTTAATCT
rJMSF009F08+          AAAAGAATAAAATACTAGACTGTGGAGGATTAGACTTTGTCTTCCATCATGTCTTAATCT
rJMFF008E15+          AAAAGAATAAAATACTAGACTGTGGAGGATTAGACTTTGTCTTCCATCATGTCTTAATCT
                      ____________________________________________________________
consensus             AAAAGAATAAAATACTAGACTGTGGAGGATTAGACTTTGTCTTCCATCATGTCTTAATCT
 
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JMFF008E15-           TTCTCCAA                                                    
rJMSF009F08+          TTCTCCAAACCCACCTAATATGGAAGCTTGGGTAAGATAGGTACTTTAATATATATCAAG
rJMFF008E15+          TTCTCCAAACCCACCTAATATGGAAGCTTGGGTAAGATAGGTACTTTAATATATATCAAG
                      ____________________________________________________________
consensus             TTCTCCAAACCCACCTAATATGGAAGCTTGGGTAAGATAGGTACTTTAATATATATCAAG
 
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rJMSF009F08+          AATGCTAAAGCCTCTAGAAGCCTTAGCTAGCTTCATGTATTATATAGTTTGATATACTT 
rJMFF008E15+          AATGCTAAAGCCTCTAGAAGCCTTAGCTAGCTTCATGTATTATATAGTTTGATATACTTT
                      ____________________________________________________________
consensus             AATGCTAAAGCCTCTAGAAGCCTTAGCTAGCTTCATGTATTATATAGTTTGATATACTTT