Contig 012241:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008D02Sequence661012241 (5)emb|CDP01724.1|1e-64unnamed protein product [Coffea canephora]
JMSF015E01Sequence299000904 (7)emb|CAN61174.1|1e-27hypothetical protein VITISV_009380 [Vitis vinifera]786012241 (5)emb|CDP01724.1|2e-100unnamed protein product [Coffea canephora]
JMSF022H09Sequence680000904 (7)ref|XP_009615007.1|6e-83PREDICTED: probable metal-nicotianamine transporter YSL7 isoform X1 [Nicotiana 693012241 (5)emb|CDP01724.1|3e-82unnamed protein product [Coffea canephora]
JMSF031O24Sequence637000904 (7)ref|XP_009615007.1|2e-65PREDICTED: probable metal-nicotianamine transporter YSL7 isoform X1 [Nicotiana 605012241 (5)emb|CDP01724.1|1e-66unnamed protein product [Coffea canephora]
JMSF048P17Sequence662000904 (7)ref|XP_009615007.1|7e-81PREDICTED: probable metal-nicotianamine transporter YSL7 isoform X1 [Nicotiana 695012241 (5)emb|CDP01724.1|1e-82unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF015E01+ GTCCATGTTCGTTAGCCAGATTATTGGGACTGCCATGGGGTGC
                      ____________________________________________________________
consensus GTCCATGTTCGTTAGCCAGATTATTGGGACTGCCATGGGGTGC
 
. : . : . : . : . : . :
rJMSF015E01+ GTGATCTCCCCGCTCGTGTTTTGGATCTTCTACAACGCTTTCCCTAATTTGGGTAAAACT
rJMSF022H09+ AAACT
rJMSF048P17+ AAACT
                      ____________________________________________________________
consensus GTGATCTCCCCGCTCGTGTTTTGGATCTTCTACAACGCTTTCCCTAATTTGGGTAAAACT
 
. : . : . : . : . : . :
rJMSF015E01+ GGGTCGGAGTACCCCGCCCCAAACGCTGCTGTCTTTCGTAACATGGCCATCCTCGGGGTC
rJMSF022H09+ GGGTCGGAGTACCCCGCCCCAAACGCTGCTGTCTTTCGTAACATGGCCATCCTCGGGGTC
rJMSF048P17+ GGGTCGGAGTACCCCGCCCCAAACGCTGCTGTCTTTCGTAACATGGCCATCCTCGGGGTC
rJMFF008D02+ TC
                      ____________________________________________________________
consensus GGGTCGGAGTACCCCGCCCCAAACGCTGCTGTCTTTCGTAACATGGCCATCCTCGGGGTC
 
. : . : . : . : . : . :
rJMSF015E01+ GAAGGCTTCTCAGCTCTGCCAAAGAATTGCCTTACACTATGCTATATATTCTTCGTTGGA
rJMSF022H09+ GAAGGCTTCTCAGCTCTGCCAAAGAATTGCCTTACACTATGCTATATATTCTTCGTTGGA
rJMSF031O24+ TCTGCCAAAGAATTGCCTTACACTATGCTATATATTCTTCGTTGGA
rJMSF048P17+ GAAGGCTTCTCAGCTCTGCCAAAGAATTGCCTTACACTATGCTATATATTCTTCGTTGGA
rJMFF008D02+ GAAGGCTTCTCAGCTCTGCCAAAGAATTGCCTTACACTATGCTATATATTCTTCGTTGGA
                      ____________________________________________________________
consensus GAAGGCTTCTCAGCTCTGCCAAAGAATTGCCTTACACTATGCTATATATTCTTCGTTGGA
 
. : . : . : . : . : . :
rJMSF015E01+ GCTATTGTTATAAACGGTGTGAGGGATGGCGTGGGGAAGAAGTGGGCGCGGTTCATTCCC
rJMSF022H09+ GCTATTGTTATAAACGGTGTGAGGGATGGCGTGGGGAAGAAGTGGGCGCGGTTCATTCCC
rJMSF031O24+ GCTATTGTTATAAACGGTGTGAGGGATGGCGTGGGGAAGAAGTGGGCGCGGTTCATTCCC
rJMSF048P17+ GCTATTGTTATAAACGGTGTGAGGGATGGCGTGGGGAAGAAGTGGGCGCGGTTCATTCCC
rJMFF008D02+ GCTATTGTTATAAACGGTGTGAGGGATGGCGTGGGGAAGAAGTGGGCGCGGTTCATTCCC
                      ____________________________________________________________
consensus GCTATTGTTATAAACGGTGTGAGGGATGGCGTGGGGAAGAAGTGGGCGCGGTTCATTCCC
 
. : . : . : . : . : . :
rJMSF015E01+ CTTCCAATGGCAATGGCTATACCGTTTTACATTGGTAGCTACTTCGCGATTGATATGTTT
rJMSF022H09+ CTTCCAATGGCAATGGCTATACCGTTTTACATTGGTAGCTACTTCGCGATTGATATGTTT
rJMSF031O24+ CTTCCAATGGCAATGGCTATACCGTTTTACATTGGTAGCTACTTCGCGATTGATATGTTT
rJMSF048P17+ CTTCCAATGGCAATGGCTATACCGTTTTACATTGGTAGCTACTTCGCGATTGATATGTTT
rJMFF008D02+ CTTCCAATGGCAATGGCTATACCGTTTTACATTGGTAGCTACTTCGCGATTGATATGTTT
                      ____________________________________________________________
consensus CTTCCAATGGCAATGGCTATACCGTTTTACATTGGTAGCTACTTCGCGATTGATATGTTT
 
. : . : . : . : . : . :
rJMSF015E01+ GTTGGGACGGTGATATTGTTCGTGTGGCAGAAGATAAACCGGGCAAAAGCCGACGCCTTT
rJMSF022H09+ GTTGGGACGGTGATATTGTTCGTGTGGCAGAAGATAAACCGGGCAAAAGCCGACGCCTTT
rJMSF031O24+ GTTGGGACGGTGATATTGTTCGTGTGGCAGAAGATAAACCGGGCAAAAGCCGACGCCTTT
rJMSF048P17+ GTTGGGACGGTGATATTGTTCGTGTGGCAGAAGATAAACCGGGCAAAAGCCGACGCCTTT
rJMFF008D02+ GTTGGGACGGTGATATTGTTCGTGTGGCAGAAGATAAACCGGGCAAAAGCCGACGCCTTT
                      ____________________________________________________________
consensus GTTGGGACGGTGATATTGTTCGTGTGGCAGAAGATAAACCGGGCAAAAGCCGACGCCTTT
 
. : . : . : . : . : . :
rJMSF015E01+ GGACCGGCTGTGGCTTCTGGACTAATATGTGGAGATGGGATATGGACCTTGCCTGATTCA
rJMSF022H09+ GGACCGGCTGTGGCTTCTGGACTAATATGTGGAGATGGGATATGGACCTTGCCTGATTCA
rJMSF031O24+ GGACCGGCTGTGGCTTCTGGACTAATATGTGGAGATGGGATATGGACCTTGCCTGATTCA
rJMSF048P17+ GGACCGGCTGTGGCTTCTGGACTAATATGTGGAGATGGGATATGGACCTTGCCTGATTCA
rJMFF008D02+ GGACCGGCTGTGGCTTCTGGACTAATATGTGGAGATGGGATATGGACCTTGCCTGATTCA
                      ____________________________________________________________
consensus GGACCGGCTGTGGCTTCTGGACTAATATGTGGAGATGGGATATGGACCTTGCCTGATTCA
 
. : . : . : . : . : . :
rJMSF015E01+ ATACTTGCATTGGCTGGGGTGAAGCCACCTATTTGCATGAAGTTTCTGTCCAGGAAAGAT
rJMSF022H09+ ATACTTGCATTGGCTGGGGTGAAGCCACCTATTTGCATGAAGTTTCTGTCCAGGAAAGAT
rJMSF031O24+ ATACTTGCATTGGCTGGGGTGAAGCCACCTATTTGCATGAAGTTTCTGTCCAGGAAAGAT
rJMSF048P17+ ATACTTGCATTGGCTGGGGTGAAGCCACCTATTTGCATGAAGTTTCTGTCCAGGAAAGAT
rJMFF008D02+ ATACTTGCATTGGCTGGGGTGAAGCCACCTATTTGCATGAAGTTTCTGTCCAGGAAAGA-
                      ____________________________________________________________
consensus ATACTTGCATTGGCTGGGGTGAAGCCACCTATTTGCATGAAGTTTCTGTCCAGGAAAGAT
 
. : . : . : . : . : . :
rJMSF015E01+ AACACAAGGGTTG--ACTTTCTTACATCCTTAAATCATGTCTGATCATATATGATTCATA
rJMSF022H09+ AACACAAGGGTTGATACTTTCTTACATCCTTAAATCATGTCTGATCATATATGATTCATA
rJMSF031O24+ AACACAAGGGTTGATACTTTCTTACATCCTTAAATCATGTCTGATCATATATGATTCATA
rJMSF048P17+ AACACAAGGGTTGATACTTTCTTACATCCTTAAATCATGTCTGATCATATATGATTCATA
rJMFF008D02+ AACACAAGGGTTGATACTTTCTTACATCCTTAAATCATGTCTGATCATATATGATTCATA
                      ____________________________________________________________
consensus AACACAAGGGTTGATACTTTCTTACATCCTTAAATCATGTCTGATCATATATGATTCATA
 
. : . : . : . : . : . :
rJMSF015E01+ TTTCCCTCTCAAATGTTAGTTTGATGTATATATATAGTGATATGTGGCTGTACAAGAAGT
rJMSF022H09+ TTTCCCTCTCAAATGTTAGTTTGATGTATATATATAGTGATATGTGGCTGTACAAGAAGT
rJMSF031O24+ TTTCCCTCTCAAATGTTAGTTTGATGTATATATATAGTGATATGTGGCTGTACAAGAAGT
rJMSF048P17+ TTTCCCTCTCAAATGTTAGTTTGATGTATATATATAGTGATATGTGGCTGTACAAGAAGT
rJMFF008D02+ TTTCCCTCTCAAATGTTAGTTTGATGTATATATATAGTGATATGTGGCTGTACAAGAAGT
                      ____________________________________________________________
consensus TTTCCCTCTCAAATGTTAGTTTGATGTATATATATAGTGATATGTGGCTGTACAAGAAGT
 
. : . : . : . : . : . :
rJMSF015E01+ CTGTACCTGGTGGGTTTAAGATCATCAGCTCAAAGGGTTACATAGTGGGATTGTTTGTCT
rJMSF022H09+ CTGTACCTGGTGGGTTTAAGATCATCAGCTCAAAGGGTTACATAGTGGGATTGTTTGTCT
rJMSF031O24+ CTGTACCTGGTGGGTTTAAGATCATCAGCTCAAAGGGTTACATAGTGGGATTGTTTGTCT
rJMSF048P17+ CTGTACCTGGTGGGTTTAAGATCATCAGCTCAAAGGGTTACATAGTGGGATTGTTTGTCT
rJMFF008D02+ CTGTACCTGGTGGGTTTAAGATCATCAGCTCAAAGGGTTACATAGTGGGATTGTTTGTCT
                      ____________________________________________________________
consensus CTGTACCTGGTGGGTTTAAGATCATCAGCTCAAAGGGTTACATAGTGGGATTGTTTGTCT
 
. : . : . : . : . : . :
rJMSF015E01+ TTATAGATGTTCATAGTGGTTTGTGAATATCACACATACCTTAGAGGTTTGTGATGTATG
rJMSF022H09+ TTATAGATGTTCATAGTGGTTTGTGAATATCACACATACCTTAGAGGTTTGTGATGTATG
rJMSF031O24+ TTATAGATGTTCATAGTGGTTTGTGAATATCACACATACCTTAGAGGTTTGTGATGTATG
rJMSF048P17+ TTATAGATGTTCATAGTGGTTTGTGAATATCACACATACCTTAGAGGTTTGTGATGTATG
rJMFF008D02+ TTATAGATGTTCATAGTGGTTTGTGAATATCACACATACCTTAGAGGTTTGTGATGTATG
                      ____________________________________________________________
consensus TTATAGATGTTCATAGTGGTTTGTGAATATCACACATACCTTAGAGGTTTGTGATGTATG
 
. : . : . : . : . : . :
rJMSF015E01+ TGAGTTTTAAATGAAAAATATTAAG
rJMSF022H09+ TGAGTTTTAAATGAAAAATATTAAG
rJMSF031O24+ TGAGTTT
rJMSF048P17+ TGAGTTTTAAATGAAAAATATTAAG
rJMFF008D02+ TGAGTTTTAAATGAAAAATATTAAGTTACAATGTCAGTAAAGAAATAATAGAATCAAAAT
                      ____________________________________________________________
consensus TGAGTTTTAAATGAAAAATATTAAGTTACAATGTCAGTAAAGAAATAATAGAATCAAAAT