Contig 012235:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF006G10-                                         ATTCAGTAAAAAGCAAAACACACACAAATT
JMFF031M05-                                          TTCAGTAAAAAGCAAAACACACACAAATT
                      ____________________________________________________________
consensus                                           ATTCAGTAAAAAGCAAAACACACACAAATT
 
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JMFF006G10-           GGGAGAATGGCACAACTTTTTGTGAAGCAGGCAAAACAATATTCTGAGGGAAGGCCATCA
JMFF031M05-           GGGAGAATGGCACAACTTTTTGTGAAGCAGGCAAAACAATATTCTGAGGGAAGGCCATCA
                      ____________________________________________________________
consensus             GGGAGAATGGCACAACTTTTTGTGAAGCAGGCAAAACAATATTCTGAGGGAAGGCCATCA
 
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JMFF006G10-           TACCCACAAGAGCTTTTCCATTTCATTGCCTCTAAAACTCCATCTCATGATCTTGCCTGG
JMFF031M05-           TACCCACAAGAGCTTTTCCATTTCATTGCCTCTAAAACTCCATCTCATGATCTTGCCTGG
                      ____________________________________________________________
consensus             TACCCACAAGAGCTTTTCCATTTCATTGCCTCTAAAACTCCATCTCATGATCTTGCCTGG
 
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JMFF006G10-           GATGTCGGCACTGGTAGCGGCCAAGCTGCCAAATCACTAGCAGCTATATACAAGAATATG
JMFF031M05-           GATGTCGGCACTGGTAGCGGCCAAGCTGCCAAATCACTAGCAGCTATATACAAGAATATG
rJMFF006G10+                                           TCACTAGCAGCTATATACAAGAATATG
                      ____________________________________________________________
consensus             GATGTCGGCACTGGTAGCGGCCAAGCTGCCAAATCACTAGCAGCTATATACAAGAATATG
 
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JMFF006G10-           GTTGCCACGGACACGAGCCAGCAGCAACTGGAGTACGCAGCGAAGCTTCCCAACGTCCGA
JMFF031M05-           GTTGCCACGGACACGAGCCAGCAGCAACTGGAGTACGCAGCGAAGCTTCCCAACGTCCGA
rJMFF006G10+          GTTGCCACGGACACGAGCCAGCAGCAACTGGAGTACGCAGCGAAGCTTCCCAACGTCCGA
                      ____________________________________________________________
consensus             GTTGCCACGGACACGAGCCAGCAGCAACTGGAGTACGCAGCGAAGCTTCCCAACGTCCGA
 
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JMFF006G10-           TACGAACGCACCCCT-CCCAAGATGTCGACGGCGGAGCTGGAAGCCTTAGTGGGAAAGGA
JMFF031M05-           TACGAACGCACCCCT-CCCAAGATGTCGACGGCGGAGCTGGAAGCCTTAGTGGGAAAGGA
rJMFF031M05+                                ATGTCGACGGCGGAGCTGGAAGCCTTAGTGGGAAAGGA
rJMFF006G10+          TACGAACGCACCCNTCCCCAAGATGTCGACGGCGGAGCTGGAAGCCTTAGTGGGAAAGGA
                      ____________________________________________________________
consensus             TACGAACGCACCCCT-CCCAAGATGTCGACGGCGGAGCTGGAAGCCTTAGTGGGAAAGGA
 
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JMFF006G10-           ATCGACGTTCGATCTGGTGACCGTAGCGCAAGCCATGCACTGGTTCGATCTGCCGGCGTT
JMFF031M05-           ATCGACGTTCGATCTGGTGACCGTAGCGCAAGCCATGCACTGGTTCGATCTGCCGGCGTT
rJMFF031M05+          ATCGACGTTCGATCTGGTGACCGTAGCGCAAGCCATGCACTGGTTCGATCTGCCGGCGTT
rJMFF006G10+          ATCGACGTTCGATCTGGTGACCGTAGCGCAAGCCATGCACTGGTTCGATCTGCCGGCGTT
                      ____________________________________________________________
consensus             ATCGACGTTCGATCTGGTGACCGTAGCGCAAGCCATGCACTGGTTCGATCTGCCGGCGTT
 
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JMFF006G10-           TTACCAGCAGGCGAGACGGGTGCTGAAGAAGCCCGACGGGGTAATCGCCACGTGGTGCTA
JMFF031M05-           TTACCAGCAGGCGAGACGGGTGCTGAAGAAGCCCGACGGGGTAATCGCCACGTGGTGCTA
rJMFF031M05+          TTACCAGCAGGCGAGACGGGTGCTGAAGAAGCCCGACGGGGTAATCGCCACGTGGTGCTA
rJMFF006G10+          TTACCAGCAGGCGAGACGGGTGCTGAAGAAGCCCGACGGGGTAATCGCCACGTGGTGCTA
                      ____________________________________________________________
consensus             TTACCAGCAGGCGAGACGGGTGCTGAAGAAGCCCGACGGGGTAATCGCCACGTGGTGCTA
 
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JMFF006G10-           CACGCTGGCCCAAGTCAACGAAGGCGTGGACGCCTTGCTGCACAAGCTCTACTTCGTGGA
JMFF031M05-           CACGCTGGCCCAAGTCAACGAAGGCGTGGACGCCTTGCTGCACAAGCTCTACTTCGTGGA
rJMFF031M05+          CACGCTGGCCCAAGTCAACGAAGGCGTGGACGCCTTGCTGCACAAGCTCTACTTCGTGGA
rJMFF006G10+          CACGCTGGCCCAAGTCAACGAAGGCGTGGACGCCTTGCTGCACAAGCTCTACTTCGTGGA
                      ____________________________________________________________
consensus             CACGCTGGCCCAAGTCAACGAAGGCGTGGACGCCTTGCTGCACAAGCTCTACTTCGTGGA
 
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JMFF006G10-           TCTTGATCCCTACTGGGAATC                                       
JMFF031M05-           TCTTGATCCCTACTGGGAATC                                       
rJMFF031M05+          TCTTGATCCCTACTGGGAATCGCCGAAGAAGCTGGTGGACGATGAGTACAAGAGCATCGA
rJMFF006G10+          TCTTGATCCCTACTGGGAATCGCCGAAGAAGCTGGTGGACGATGAGTACAAGAGCATCGA
                      ____________________________________________________________
consensus             TCTTGATCCCTACTGGGAATCGCCGAAGAAGCTGGTGGACGATGAGTACAAGAGCATCGA
 
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rJMFF031M05+          GTTCCCGTTCGAGGCGGTGGAAGGGTGCGCGGGTACTGGGCCGGTGGAGTTCACGGCGGA
rJMFF006G10+          GTTCCCGTTCGAGGCGGTGGAAGGGTGCGCGGGTACTGGGCCGGTGGAGTTCACGGCGGA
                      ____________________________________________________________
consensus             GTTCCCGTTCGAGGCGGTGGAAGGGTGCGCGGGTACTGGGCCGGTGGAGTTCACGGCGGA
 
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rJMFF031M05+          GCGAGTGATGGATTTGGAAGGGTATTTGACGTGGTTGAGGTCGTGGTCGGCGTACCAGAC
rJMFF006G10+          GCGAGTGATGGATTTGGAAGGGTATTTGACGTGGTTGAGGTCGTGGTCGGCGTACCAGAC
                      ____________________________________________________________
consensus             GCGAGTGATGGATTTGGAAGGGTATTTGACGTGGTTGAGGTCGTGGTCGGCGTACCAGAC
 
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rJMFF031M05+          GGCGAAGCATAAGGGTGTGGAGGTGTTGGGCGAGGATGTTGTCGGGAGATTCAGGGATGC
rJMFF006G10+          GGCGAAGCATAAGGGTGTGGAGGTGTTGGGCGAGGATGTTGTCGGGAGATTCAGGGATGC
                      ____________________________________________________________
consensus             GGCGAAGCATAAGGGTGTGGAGGTGTTGGGCGAGGATGTTGTCGGGAGATTCAGGGATGC
 
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rJMFF031M05+          TTGGAATGAAGATGGGGGTGGCCAGAAACGTGTCACTTTCCCTGTTTTTCTGAGGATTGG
rJMFF006G10+          TTGGAATGAAGATGGGGGTGGCCAGAAACGTGTCACTTTCCCTGTTTTTCTGAGGATTGG
                      ____________________________________________________________
consensus             TTGGAATGAAGATGGGGGTGGCCAGAAACGTGTCACTTTCCCTGTTTTTCTGAGGATTGG
 
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rJMFF031M05+          AAAGGTTGGGAATGTGGACATGAATTCCTGATTTATGTCTTCTCCACAAAAAGCAAAATT
rJMFF006G10+          AAAGGTTGGGAATGTGGACATGAATTCCTGATTTATGTCTTCTCCACAAAAAGCAAAATT
                      ____________________________________________________________
consensus             AAAGGTTGGGAATGTGGACATGAATTCCTGATTTATGTCTTCTCCACAAAAAGCAAAATT
 
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rJMFF031M05+          CTCTGTGTTTGTTCCTATATCTTGATCTCATAGGATTGATAGATTATCAGAAGCATGACA
rJMFF006G10+          CTCTGTGTTTGTTCCTATATCTTGATCTCATAGGATTGATAGATTATCAGAAGCATGACA
                      ____________________________________________________________
consensus             CTCTGTGTTTGTTCCTATATCTTGATCTCATAGGATTGATAGATTATCAGAAGCATGACA
 
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rJMFF031M05+          TGTTAAACCTATAAAATAAAAGATATGAATAAGTATTAGACTCAAGATTCTAAT      
rJMFF006G10+          TGTTAAACCTATAAAATAAAAGATATGAATAAGTATTAGACTCAAGATTCTAATAAGAAT
                      ____________________________________________________________
consensus             TGTTAAACCTATAAAATAAAAGATATGAATAAGTATTAGACTCAAGATTCTAATAAGAAT