Contig 012233:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006A20Sequence490012233 (8)ref|XP_009793156.1|1e-27PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana sylvestris]726012233 (8)ref|XP_009599104.1|9e-105PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana tomentosiformis]
JMSF009P23Sequence317012233 (8)ref|XP_006473166.1|4e-09PREDICTED: uncharacterized J domain-containing protein C17A3.05c-like [Citrus s732012233 (8)ref|XP_009793156.1|2e-101PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana sylvestris]
JMSF021E03Sequence692012233 (8)ref|XP_009599104.1|2e-75PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana tomentosiformis]748012233 (8)ref|XP_009599104.1|4e-105PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana tomentosiformis]
JMSF023A23Sequence598012233 (8)ref|XP_009793156.1|2e-55PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana sylvestris]518012233 (8)ref|XP_009599104.1|3e-75PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF006A20-                                                            CACAAAGAAAG
                      ____________________________________________________________
consensus                                                              CACAAAGAAAG
 
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JMFF006A20-           ATGAGGCGGAGAGGGGCTGAAAGCCACCTCTTCTCAACTCCGGCCAGAACCCCAAAACCA
JMSF023A23-                     GAGGGGCTGAAAGCCACCTCTTCTCAACTCCGGCCAGAACCCCAAAACCA
JMSF009P23-                     GAGGGGCTGAAAGCCACCTCTTCTCAACTCCGGCCAGAACCCCAAAACCA
JMSF021E03-                     GAGGGGCTGAAAGCCACCTCTTCTCAACTCCGGCCAGAACCCCAAAACCA
                      ____________________________________________________________
consensus             ATGAGGCGGAGAGGGGCTGAAAGCCACCTCTTCTCAACTCCGGCCAGAACCCCAAAACCA
 
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JMFF006A20-           GGAACGAGATAGCTACCTCAGCTTTCATTCCCATTCCCATGGCTTCCACAACAGCTCCGC
JMSF023A23-           GGAACGAGATAGCTACCTCAGCTTTCATTCCCATTCCCATGGCTTCCACAACAGCTCCGC
JMSF009P23-           GGAACGAGATAGCTACCTCAGCTTTCATTCCCATTCCCATGGCTTCCACAACAGCTCCGC
JMSF021E03-           GGAACGAGATAGCTACCTCAGCTTTCATTCCCATTCCCATGGCTTCCACAACAGCTCCGC
rJMSF009P23+                                         CATTCCCATGGCTTCCACAACAGCTCCGC
                      ____________________________________________________________
consensus             GGAACGAGATAGCTACCTCAGCTTTCATTCCCATTCCCATGGCTTCCACAACAGCTCCGC
 
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JMFF006A20-           AGTCCTTTTTCTCTATCTTACAGAGATGCCGGAGAACCGAACTGCGGCAGTCCCCGGCGG
JMSF023A23-           AGTCCTTTTTCTCTATCTTACAGAGATGCCGGAGAACCGAACTGCGGCAGTCCCCGGCGG
JMSF009P23-           AGTCCTTTTTCTCTATCTTACAGAGATGCCGGAGAACCGAACTGCGGCAGTCCCCGGCGG
JMSF021E03-           AGTCCTTTTTCTCTATCTTACAGAGATGCCGGAGAACCGAACTGCGGCAGTCCCCGGCGG
rJMSF009P23+          AGTCCTTTTTCTCTATCTTACAGAGATGCCGGAGAACCGAACTGCGGCAGTCCCCGGCGG
rJMSF021E03+                       TATCTTACAGAGATGCCGGAGAACCGAACTGCGGCAGTCCCCGGCGG
rJMFF006A20+                                                                CGGCGG
                      ____________________________________________________________
consensus             AGTCCTTTTTCTCTATCTTACAGAGATGCCGGAGAACCGAACTGCGGCAGTCCCCGGCGG
 
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JMFF006A20-           TAGAGAGGAGAAGAAGACCGTACGGGTGCCGGCGGGAGGTAAGGATATTTGCAACAACGC
JMSF023A23-           TAGAGAGGAGAAGAAGACCGTACGGGTGCCGGCGGGAGGTAAGGATATTTGCAACAACGC
JMSF009P23-           TAGAGAGGAGAAGAAGACCGTACGGGTGCCGGCGGGAGGTAAGGATATTTGCAACAACGC
JMSF021E03-           TAGAGAGGAGAAGAAGACCGTACGGGTGCCGGCGGGAGGTAAGGATATTTGCAACAACGC
rJMSF009P23+          TAGAGAGGAGAAGAAGACCGTACGGGTGCCGGCGGGAGGTAAGGATATTTGCAACAACGC
rJMSF021E03+          TAGAGAGGAGAAGAAGACCGTACGGGTGCCGGCGGGAGGTAAGGATATTTGCAACAACGC
rJMFF006A20+          TAGAGAGGAGAAGAAGACCGTACGGGTGCCGGCGGGAGGTAAGGATATTTGCAACAACGC
                      ____________________________________________________________
consensus             TAGAGAGGAGAAGAAGACCGTACGGGTGCCGGCGGGAGGTAAGGATATTTGCAACAACGC
 
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JMFF006A20-           AAGGACCAAAACCGCCGCCGCGGCAAACAGCCCCTCCCGGAGTTGACACCAGAATCCACT
JMSF023A23-           AAGGACCAAAACCGCCGCCGCGGCAAACAGCCCCTCCCGGAGTTGACACCAGAATCCACT
JMSF009P23-           AAGGACCAAAACCGCCGCCGCGGCAAACAGCCCCTCCCGGAGTTGACACCAGAATCCACT
JMSF021E03-           AAGGACCAAAACCGCCGCCGCGGCAAACAGCCCCTCCCGGAGTTGACACCAGAATCCACT
rJMSF009P23+          AAGGACCAAAACCGCCGCCGCGGCAAACAGCCCCTCCCGGAGTTGACACCAGAATCCACT
rJMSF021E03+          AAGGACCAAAACCGCCGCCGCGGCAAACAGCCCCTCCCGGAGTTGACACCAGAATCCACT
rJMFF006A20+          AAGGACCAAAACCGCCGCCGCGGCAAACAGCCCCTCCCGGAGTTGACACCAGAATCCACT
                      ____________________________________________________________
consensus             AAGGACCAAAACCGCCGCCGCGGCAAACAGCCCCTCCCGGAGTTGACACCAGAATCCACT
 
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JMFF006A20-           GGGAGAACGAAGATGAAGGCTGGATAGGAGGAAGCAGCAGCTCAAGCTCAACGCAAGAAC
JMSF023A23-           GGGAGAACGAAGATGAAGGCTGGATAGGAGGAAGCAGCAGCTCAAGCTCAACGCAAGAAC
JMSF009P23-           GGGAGAACGAAGATGAAGGCTGGATAG                                 
JMSF021E03-           GGGAGAACGAAGATGAAGGCTGGATAGGAGGAAGCAGCAGCTCAAGCTCAACGCAAGAAC
rJMSF009P23+          GGGAGAACGAAGATGAAGGCTGGATAGGAGGAAGCAGCAGCTCAAGCTCAACGCAAGAAC
rJMSF023A23+                  GAAGATGAGGGCTGGATAGGAGGAAGCAGCAGCTCNAGCTCANCGCAAGAAC
rJMSF021E03+          GGGAGAACGAAGATGAAGGCTGGATAGGAGGAAGCAGCAGCTCAAGCTCAACGCAAGAAC
rJMFF006A20+          GGGAGAACGAAGATGAAGGCTGGATAGGAGGAAGCAGCAGCTCAAGCTCAACGCAAGAAC
                      ____________________________________________________________
consensus             GGGAGAACGAAGATGAAGGCTGGATAGGAGGAAGCAGCAGCTCAAGCTCAACGCAAGAAC
 
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JMFF006A20-           AACAACTAAAAGCCGATGAAAATGAGCTTCTCGGAGATAAATTCTCAGAAGTACTCAACA
JMSF023A23-           AACAACTAAAAGCCGATGAAAATGAGCTTCTCGGAGATAAATTCTCAGAATTACTCAACA
JMSF021E03-           AACAACTAAAAGCCGATGAAAATGAGCTTCTCGGAGATAAATTCTCAGAATTACTCAACA
rJMSF009P23+          AACAACTAAAAGCCGATGAAAATGAGCTTCTCGGAGATAAATTCTCAGAATTACTCAACA
rJMSF023A23+          ANCATCTAAAAGCCGATGAAAATGAGCTTCTNGGAGATANATTCTCAGAATTACTCAACA
rJMSF021E03+          AACAACTAAAAGCCGATGAAAATGAGCTTCTCGGAGATAAATTCTCAGAATTACTCAACA
rJMFF006A20+          AACAACTAAAAGCCGATGAAAATGAGCTTCTCGGAGATAAATTCTCAGAAGTACTCAACA
                      ____________________________________________________________
consensus             AACAACTAAAAGCCGATGAAAATGAGCTTCTCGGAGATAAATTCTCAGAATTACTCAACA
 
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JMFF006A20-           GTTCAACAGATTCTCACTACCAGTTCTTGGGAGTGGGTGCAGATGCGGACGTGGAAGAG 
JMSF023A23-           GTTCAACAGATTCTCACTACCAGTTCTTGGGAGTGGGTGCAGATGCGGACGTGGAAGAGA
JMSF021E03-           GTTCAACAGATTCTCACTACCAGTTCTTGGGAGTGGGTGCAGATGCGGACGTGGAAGAGA
rJMSF009P23+          GTTCAACAGATTCTCACTACCAGTTCTTGGGAGTGGGTGCAGATGCGGACGTGGAAGAGA
rJMSF023A23+          GTTCAACNGATTCTCACTACCNGTTNTTGGGAGTGGGTGCAGNTGCGGACGTGGAAGAGA
rJMSF021E03+          GTTCAACAGATTCTCACTACCAGTTCTTGGGAGTGGGTGCAGATGCGGACGTGGAAGAGA
rJMFF006A20+          GTTCAACAGATTCTCACTACCAGTTCTTGGGAGTGGGTGCAGATGCGGACGTGGAAGAGA
                      ____________________________________________________________
consensus             GTTCAACAGATTCTCACTACCAGTTCTTGGGAGTGGGTGCAGATGCGGACGTGGAAGAGA
 
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JMSF023A23-           TCAAAACCGCGTACCGGAGACTATCAAAGGAGTATCATCCAGACACAACTTCCCTTCCTT
JMSF021E03-           TCAAAACCGCGTACCGGAGACTATCAAAGGAGTATCATCCAGACACAACTTCCCTTCCTT
rJMSF009P23+          TCAAAACCGCGTACCGGAGACTATCAAAGGAGTATCATCCAGACACAACTTCCCTTCCTT
rJMSF023A23+          TCAAAACCGCGTNCCGGAGACTATCAAAGGAGTATCATCCNGACNCAACTTNCCTTCCTT
rJMSF021E03+          TCAAAACCGCGTACCGGAGACTATCAAAGGAGTATCATCCAGACACAACTTCCCTTCCTT
rJMFF006A20+          TCAAAACCGCGTACCGGAGACTATCAAAGGAGTATCATCCAGACACAACTTCCCTTCCTT
                      ____________________________________________________________
consensus             TCAAAACCGCGTACCGGAGACTATCAAAGGAGTATCATCCAGACACAACTTCCCTTCCTT
 
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JMSF023A23-           TAAAAGCTGCATCTGAGAAATTCATGAAGCTAAAAGAAGTGTATGAAGTTCTTAGCAACG
JMSF021E03-           TAAAAGCTGCATCTGAGAAATTCATGAAGCTAAAAGAAGTGTATGAAGTTCTTAGCAACG
rJMSF009P23+          TAAAAGCTGCATCTGAGAAATTCATGAAGCTAAAAGAAGTGTATGAAGTTCTTAGCAACG
rJMSF023A23+          TAAAAGCTGCATCTGAGAAATTCATGAAGCTAAAAGAAGTGTNTGTAGTTNTTAGCAANG
rJMSF021E03+          TAAAAGCTGCATCTGAGAAATTCATGAAGCTAAAAGAAGTGTATGAAGTTCTTAGCAACG
rJMFF006A20+          TAAAAGCTGCATCTGAGAAATTCATGAAGCTAAAAGAAGTGTATGAAGTTCTTAGCAACG
                      ____________________________________________________________
consensus             TAAAAGCTGCATCTGAGAAATTCATGAAGCTAAAAGAAGTGTATGAAGTTCTTAGCAACG
 
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JMSF023A23-           ACGA                                                        
JMSF021E03-           ACGAAAAACGCAGGTTTTATGACTGGACGCTTGCCCAGGAAGCAGCCAGCAAAGAAGCAG
rJMSF009P23+          ACGAAAAACGCAGGTTTTATGACTGGACGCTTGCCCAGGAAGCAGCCAGCAAAGAAGCAG
rJMSF023A23+          ACGAAAAACGCAGGTTTTATGACTGGACGCTTGCCCAGGAAGCAGCCAGCAAAGAAGCAG
rJMSF021E03+          ACGAAAAACGCAGGTTTTATGACTGGACGCTTGCCCAGGAAGCAGCCAGCAAAGAAGCAG
rJMFF006A20+          ACGAAAAACGCAGGTTTTATGACTGGACGCTTGCCCAGGAAGCAGCCAGCAAAGAAGCAG
                      ____________________________________________________________
consensus             ACGAAAAACGCAGGTTTTATGACTGGACGCTTGCCCAGGAAGCAGCCAGCAAAGAAGCAG
 
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JMSF021E03-           AGAAACTGAGGATGAAGTTTCAAGATCCCCACATGCA                       
rJMSF009P23+          AGAAACTGAGGATGAAGTTTCAAGATCCCCACATGCAAGAAGTGGAAAACTGGGAATCAG
rJMSF023A23+          AGAAACTGAGGANGAAGTTTCAAGATCCCCACATGCAAGAAGTGGAAAACTGGGAATCNG
rJMSF021E03+          AGAAACTGAGGATGAAGTTTCAAGATCCCCACATGCAAGAAGTGGAAAACTGGGAATCAG
rJMFF006A20+          AGAAACTGAGGATGAAGTTTCAAGATCCCCACATGCAAGAAGTGGAAAACTGGGAATCAG
                      ____________________________________________________________
consensus             AGAAACTGAGGATGAAGTTTCAAGATCCCCACATGCAAGAAGTGGAAAACTGGGAATCAG
 
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rJMSF009P23+          TTCCAGACATGGTGGATAGACTGGGTGGGAAGAACATGGAGCTCAGTTCTCAGGCCAAAT
rJMSF023A23+          TTCCAGACATGGTGGATAGACTGGGTGGGAAGAACATGGAGCTCAGTTCTCAGGCCAAAT
rJMSF021E03+          TTCCAGACATGGTGGATAGACTGGGTGGGAAGAACATGGAGCTCAGTTCTCAGGCCAAAT
rJMFF006A20+          TTCCAGACATGGTGGATAGACTGGGTGGGAAGAACATGGAGCTCAGTTCTCAGGCCAAAT
                      ____________________________________________________________
consensus             TTCCAGACATGGTGGATAGACTGGGTGGGAAGAACATGGAGCTCAGTTCTCAGGCCAAAT
 
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rJMSF009P23+          CCGCCCTCACTTTCGATATCTTGATCATTCTTTTCTCGGTCT                  
rJMSF023A23+          CCGCCCTCACTTTNGATATCTTGATCATTCTNTTCTCGGTCT                  
rJMSF021E03+          CCGCCCTCACTTTCGATATCTTGATCATTCTTTTCTCGGTCTGTTGCATTGTATATGCCA
rJMFF006A20+          CCGCCCTCACTTTCGATATCTTGATCATTCTTTTCTCGGTCTGTTGCATTGTATATGCCA
                      ____________________________________________________________
consensus             CCGCCCTCACTTTCGATATCTTGATCATTCTTTTCTCGGTCTGTTGCATTGTATATGCCA
 
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rJMSF021E03+          TTTACTTCAAAGAACAATATTAAAACCATAT                             
rJMFF006A20+          TTTACTTCAAAGAACAATATTAAAACCATATTGTACAAAAACAGAGCTTTTAAATTTGCA
                      ____________________________________________________________
consensus             TTTACTTCAAAGAACAATATTAAAACCATATTGTACAAAAACAGAGCTTTTAAATTTGCA