| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003N22 | Sequence | 510 | 007343 (10) | gb|AAF69014.1|AF260827_1 | 2e-62 | cysteine protease [Ipomoea batatas] | 774 | 012220 (7) | gb|AAF69014.1|AF260827_1 | 9e-94 | cysteine protease [Ipomoea batatas] |
| JMFF015N13 | Sequence | 554 | 007343 (10) | gb|AAF69014.1|AF260827_1 | 8e-87 | cysteine protease [Ipomoea batatas] | 530 | 012220 (7) | gb|AAF69014.1|AF260827_1 | 4e-49 | cysteine protease [Ipomoea batatas] |
| JMFF020O23 | Sequence | 540 | 007343 (10) | gb|AAF69014.1|AF260827_1 | 5e-68 | cysteine protease [Ipomoea batatas] | 779 | 012220 (7) | gb|AAF69014.1|AF260827_1 | 6e-114 | cysteine protease [Ipomoea batatas] |
| JMFF030D13 | Sequence | 450 | 007343 (10) | gb|AAF69014.1|AF260827_1 | 2e-63 | cysteine protease [Ipomoea batatas] | 715 | 012220 (7) | gb|AAF69014.1|AF260827_1 | 5e-97 | cysteine protease [Ipomoea batatas] |
| JMFN012L18 | Sequence | 638 | 012220 (7) | gb|AAF69014.1|AF260827_1 | 1e-80 | cysteine protease [Ipomoea batatas] | |||||
| JMFN030K04 | Sequence | 648 | 012220 (7) | gb|AAF69014.1|AF260827_1 | 1e-145 | cysteine protease [Ipomoea batatas] | |||||
| JMSF048A15 | Sequence | 687 | 007343 (10) | gb|AAF69014.1|AF260827_1 | 8e-106 | cysteine protease [Ipomoea batatas] | 798 | 012220 (7) | gb|AAF69014.1|AF260827_1 | 2e-119 | cysteine protease [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
JMFN012L18- ACTCGATTTGCTATACTAAAATGGGGGAGCACCATACCAAGG
____________________________________________________________
consensus ACTCGATTTGCTATACTAAAATGGGGGAGCACCATACCAAGG
. : . : . : . : . : . :
JMFN012L18- AAATTTGGATGGTGGGTGACTGAGGTCCGTAGACTACTTTCGTATATTAAATACAGTGCA
____________________________________________________________
consensus AAATTTGGATGGTGGGTGACTGAGGTCCGTAGACTACTTTCGTATATTAAATACAGTGCA
. : . : . : . : . : . :
JMFN012L18- GATATGATAGTGAATTTCTTCTATTTGCATAATTTATCCAAGTAGAAATTCATGCACTTG
____________________________________________________________
consensus GATATGATAGTGAATTTCTTCTATTTGCATAATTTATCCAAGTAGAAATTCATGCACTTG
. : . : . : . : . : . :
JMFN012L18- ATGAAATGTATATTGGATACTGTCCCTTTATATGCTCCATTTATCAAAAGGGAAATCATT
____________________________________________________________
consensus ATGAAATGTATATTGGATACTGTCCCTTTATATGCTCCATTTATCAAAAGGGAAATCATT
. : . : . : . : . : . :
JMFN012L18- ATCTCATTGCCTTAACACACGCAGGTTAAGGACAGGACTCTCAACGGAAACACAGCCTAT
JMFN030K04- GGTTAAGGACAGGACTCTCAACGGAAACACAGCCTAT
____________________________________________________________
consensus ATCTCATTGCCTTAACACACGCAGGTTAAGGACAGGACTCTCAACGGAAACACAGCCTAT
. : . : . : . : . : . :
JMFN012L18- GGTTCCCATGTTATGCAATATGGTGATTTAGAACAGAATGTGGACTCTCTTTTTCTGTAT
JMFN030K04- GGTTCCCATGTTATGCAATATGGTGATTTAGAGCAGAATGTGGACTCTCTTTTTCTGTAT
rJMSF048A15+ TTAGAGCAGAATGTGGACTCTCTTTTTCTGTAT
rJMFF020O23+ TGTAT
____________________________________________________________
consensus GGTTCCCATGTTATGCAATATGGTGATTTAGAGCAGAATGTGGACTCTCTTTTTCTGTAT
. : . : . : . : . : . :
JMFN012L18- ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
JMFN030K04- ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
rJMSF048A15+ ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
rJMFF020O23+ ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
rJMFF003N22+ ACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
____________________________________________________________
consensus ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
. : . : . : . : . : . :
JMFN012L18- TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
JMFN030K04- TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
rJMSF048A15+ TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
rJMFF020O23+ TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
rJMFF030D13+ TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
rJMFF003N22+ TCAGCGCCAAGAAAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
____________________________________________________________
consensus TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
. : . : . : . : . : . :
JMFN012L18- GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
JMFN030K04- GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
rJMSF048A15+ GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
rJMFF020O23+ GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
rJMFF030D13+ GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
rJMFF003N22+ GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
____________________________________________________________
consensus GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
. : . : . : . : . : . :
JMFN012L18- AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
JMFN030K04- AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
rJMSF048A15+ AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
rJMFF020O23+ AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
rJMFF030D13+ AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
rJMFF003N22+ AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
____________________________________________________________
consensus AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
. : . : . : . : . : . :
JMFN012L18- TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCT
JMFN030K04- TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMSF048A15+ TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMFF020O23+ TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMFF030D13+ TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMFF015N13+ AAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMFF003N22+ TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
____________________________________________________________
consensus TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
. : . : . : . : . : . :
JMFN030K04- TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMSF048A15+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMFF020O23+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMFF030D13+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMFF015N13+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMFF003N22+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
____________________________________________________________
consensus TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
. : . : . : . : . : . :
JMFN030K04- GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMSF048A15+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMFF020O23+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMFF030D13+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMFF015N13+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMFF003N22+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
____________________________________________________________
consensus GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
. : . : . : . : . : . :
JMFN030K04- AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCNCTTCCTATTCCTG
rJMSF048A15+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
rJMFF020O23+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
rJMFF030D13+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
rJMFF015N13+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
rJMFF003N22+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
____________________________________________________________
consensus AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
. : . : . : . : . : . :
JMFN030K04- GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCA
rJMSF048A15+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
rJMFF020O23+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
rJMFF030D13+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
rJMFF015N13+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
rJMFF003N22+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
____________________________________________________________
consensus GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
. : . : . : . : . : . :
rJMSF048A15+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
rJMFF020O23+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
rJMFF030D13+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
rJMFF015N13+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
rJMFF003N22+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
____________________________________________________________
consensus GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
. : . : . : . : . : . :
rJMSF048A15+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
rJMFF020O23+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
rJMFF030D13+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
rJMFF015N13+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
rJMFF003N22+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
____________________________________________________________
consensus GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
. : . : . : . : . : . :
rJMSF048A15+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
rJMFF020O23+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
rJMFF030D13+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
rJMFF015N13+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
rJMFF003N22+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
____________________________________________________________
consensus TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
. : . : . : . : . : . :
rJMSF048A15+ TATAGCCAACCCATCTCTCTTTGTAAATAAT
rJMFF020O23+ TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAA
rJMFF030D13+ TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAA
rJMFF015N13+ TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAA
rJMFF003N22+ TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAATGAGT
____________________________________________________________
consensus TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAATGAGT