Contig 012216:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF011A19+                                                         GCCATAGCTTGGG
                      ____________________________________________________________
consensus                                                            GCCATAGCTTGGG
 
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rJMFF011A19+          TGGAGCCCTTGCAATTTTGTTCCCAACAGTTNTAGCAATGCACAAGGAAGAGGAAATGAT
rJMFF003A09+                           TGTTCCCANCAGTTNTAGCAATGCACAAGGAAGAGGAAATGAT
                      ____________________________________________________________
consensus             TGGAGCCCTTGCAATTTTGTTCCCAACAGTTNTAGCAATGCACAAGGAAGAGGAAATGAT
 
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rJMFF011A19+          GAANCGGTTATTGGGAATTCATACGTTCGGCCAGCCCAGGATTGGGAACAGGCAGTTAGG
rJMFF003A09+          GAAACGGTTATTGGGAATTCATACGTTCGGCCAGCCCAGGATTGGGAACAGGCAGTTAGG
                      ____________________________________________________________
consensus             GAAACGGTTATTGGGAATTCATACGTTCGGCCAGCCCAGGATTGGGAACAGGCAGTTAGG
 
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rJMFF011A19+          AAGGTACATGGAAGAGCATTTGAATCAACCCGCTCCCAGGTACTTCAGGACTGTTTACTG
rJMFF003A09+          AAGGTACATGGAAGAGCATTTGAATCAACCCGCTCCCAGGTACTTCAGGACTGTTTACTG
                      ____________________________________________________________
consensus             AAGGTACATGGAAGAGCATTTGAATCAACCCGCTCCCAGGTACTTCAGGACTGTTTACTG
 
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rJMFF011A19+          CAACGATCTTGCACCTAGGTTACCATATGATGACAAGACATTTTTGTATAAGCATTTCGG
rJMFF003A09+          CAACGATCTTGCACCTAGGTTACCATATGATGACAAGACATTTTTGTATAAGCATTTCGG
                      ____________________________________________________________
consensus             CAACGATCTTGCACCTAGGTTACCATATGATGACAAGACATTTTTGTATAAGCATTTCGG
 
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rJMFF011A19+          GGTGTGCCTCTACTACAACAGCGTGTACATTGAACAAAGAGTAGATGATGAGCCAAACCC
rJMFF003A09+          GGTGTGCCTCTACTACAACAGCGTGTACATTGAACAAAGAGTAGATGATGAGCCAAACCC
                      ____________________________________________________________
consensus             GGTGTGCCTCTACTACAACAGCGTGTACATTGAACAAAGAGTAGATGATGAGCCAAACCC
 
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rJMFF011A19+          CAACTATTTTGGGATACGCTTCCTGATACCGATGTACCTGAATGCTGTTTGGGAGTTGAT
rJMFF003A09+          CAACTATTTTGGGATACGCTTCCTGATACCGATGTACCTGAATGCTGTTTGGGAGTTGAT
                      ____________________________________________________________
consensus             CAACTATTTTGGGATACGCTTCCTGATACCGATGTACCTGAATGCTGTTTGGGAGTTGAT
 
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rJMFF011A19+          CAGAGGTTTGATGATTGGTTACATACATGGATCAGCGTACAAGGAAAGCTGGGAATCAAT
rJMFF003A09+          CAGAGGTTTGATGATTGGTTACATACATGGATCAGCGTACAAGGAAAGCTGGGAATCAAT
                      ____________________________________________________________
consensus             CAGAGGTTTGATGATTGGTTACATACATGGATCAGCGTACAAGGAAAGCTGGGAATCAAT
 
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rJMFF011A19+          CCTGTGGAGGATTGTAGGACTCTTTATTCCTGGAATTGCTGCTCACAGTCCAGTTGACTA
rJMFF003A09+          CCTGTGGAGGATTGTAGGACTCTTTATTCCTGGAATTGCTGCTCACAGTCCAGTTGACTA
                      ____________________________________________________________
consensus             CCTGTGGAGGATTGTAGGACTCTTTATTCCTGGAATTGCTGCTCACAGTCCAGTTGACTA
 
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rJMFF011A19+          TGTTACTTCCATAAGGCTTGGGAGGGAAAGACAGAATTAGCTGTCATCCATGTAAGGGCC
rJMFF003A09+          TGTTACTTCCATAAGGCTTGGGAGGGAAAGACAGAATTAGCTGTCATCCATGTAAGGGCC
                      ____________________________________________________________
consensus             TGTTACTTCCATAAGGCTTGGGAGGGAAAGACAGAATTAGCTGTCATCCATGTAAGGGCC
 
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rJMFF011A19+          TTGTTAACTCGCATCTTGAGTGCGAATCTGCAGGTGGACAAGAAGACCTGGTTTTGGAAG
rJMFF003A09+          TTGTTAACTCGCATCTTGAGTGCGAATCTGCAGGTGGACAAGAAGACCTGGTTTTGGAAG
                      ____________________________________________________________
consensus             TTGTTAACTCGCATCTTGAGTGCGAATCTGCAGGTGGACAAGAAGACCTGGTTTTGGAAG
 
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rJMFF011A19+          AAATGGAGTCAAGAAACATGTTTTAGATTGTTTGAGTGGTGATGTATATATATAACAGAC
rJMFF003A09+          AAATGGAGTCAAGAAACATGTTTTAGATTGTTTGAGTGGTGATGTATATATATAACAGAC
                      ____________________________________________________________
consensus             AAATGGAGTCAAGAAACATGTTTTAGATTGTTTGAGTGGTGATGTATATATATAACAGAC
 
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rJMFF011A19+          ATTGCTGGTTTTAGTCTGGTTTGCATGAGGAAACTCTTGTCTCTTGAGTGCAATAAATC 
rJMFF003A09+          ATTGCTGGTTTTAGTCTGGTTTGCATGAGGAAACTCTTGTCTCTTGAGTGCAATAAATCA
                      ____________________________________________________________
consensus             ATTGCTGGTTTTAGTCTGGTTTGCATGAGGAAACTCTTGTCTCTTGAGTGCAATAAATCA