Contig 012213:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002J15Sequence540007800 (2)ref|XP_009623136.1|67.4PREDICTED: uncharacterized protein LOC104114398 [Nicotiana tomentosiformis]739012213 (2)ref|XP_008225647.1|58.9PREDICTED: uncharacterized protein LOC103325271 [Prunus mume]
JMSF012B08Sequence418007800 (2)603012213 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF002J15+ TATTGTGGCAAAAGTTTCA
                      ____________________________________________________________
consensus TATTGTGGCAAAAGTTTCA
 
. : . : . : . : . : . :
rJMSF012B08+ AGGACATATATGAAG
rJMFF002J15+ GACCCGAAGGGATAAAATCAATGGCGGAGCTAATCGAGGAAGATGAGGACATATATGAAG
                      ____________________________________________________________
consensus GACCCGAAGGGATAAAATCAATGGCGGAGCTAATCGAGGAAGATGAGGACATATATGAAG
 
. : . : . : . : . : . :
rJMSF012B08+ TTCNNGAATCCAAGAATGTAAAGTCTCGCAGGGCTAAAANGAAGTCAAGAATGANGAAAC
rJMFF002J15+ TTCCTGAATCCAAGAATGTAAAGTCTCGCAGGGCTAAAATGAAGTCAAGAATGAAGAAAC
                      ____________________________________________________________
consensus TTCCTGAATCCAAGAATGTAAAGTCTCGCAGGGCTAAAATGAAGTCAAGAATGAAGAAAC
 
. : . : . : . : . : . :
rJMSF012B08+ TTTTCCCAAAAAGGATTGGGAAGACAGGAAAAGACCCGAAACTCGAAATAAATCCAACTC
rJMFF002J15+ TTTTCCCAAAAAGGATTGGGAAGACAGGAAAAGACCCGAAACTCGAAATAAATCCAACTC
                      ____________________________________________________________
consensus TTTTCCCAAAAAGGATTGGGAAGACAGGAAAAGACCCGAAACTCGAAATAAATCCAACTC
 
. : . : . : . : . : . :
rJMSF012B08+ GAGAGGAAAACGAGTACCCTGAANGTCCCGAAAGAGGATTGGAACCTCCCNCCATGGCTA
rJMFF002J15+ GAGAGGAAAACGAGTACCCTGAATGTCCCGAAAGAGGATTGGAACCTCCCACCATGGCTA
                      ____________________________________________________________
consensus GAGAGGAAAACGAGTACCCTGAATGTCCCGAAAGAGGATTGGAACCTCCCACCATGGCTA
 
. : . : . : . : . : . :
rJMSF012B08+ TGAACATTACACCTGATGTGAAAGATAGCAATTCTCTGGAGAAATCAGATTTTGTAGAAA
rJMFF002J15+ TGAACATTACACCTGATGTGAAAGATAGCAATTCTCTGGAGAAATCAGATTTTGTAGAAA
                      ____________________________________________________________
consensus TGAACATTACACCTGATGTGAAAGATAGCAATTCTCTGGAGAAATCAGATTTTGTAGAAA
 
. : . : . : . : . : . :
rJMSF012B08+ GAAAGNCGAATTACGGTTACTNGTTTNTTATTCNGGTTGCCCTNGTTGGACTAGTTACTG
rJMFF002J15+ GAGAGACGAATTACGGTTACTTGTTTCTTATTCTGGTTGCCCTTGTTGGACTAGTTACTG
                      ____________________________________________________________
consensus GAGAGACGAATTACGGTTACTTGTTTCTTATTCTGGTTGCCCTTGTTGGACTAGTTACTG
 
. : . : . : . : . : . :
rJMSF012B08+ GNGGTCGAANTTATGCACTTCTTCTTACCTNGATGTGGTGCTTCTTATCAAAGNTGGGAG
rJMFF002J15+ GAGGTCGAATTTATGCACTTCTTCTTACCTTGATGTGGTGCTTCTTATCAAAGGTGGGAG
                      ____________________________________________________________
consensus GAGGTCGAATTTATGCACTTCTTCTTACCTTGATGTGGTGCTTCTTATCAAAGGTGGGAG
 
. : . : . : . : . : . :
rJMSF012B08+ GAGCTATAAGGAGAAGTGTAAAGGTTTCTTAATCAGTTTGGAATATATCTCCTTCACTAT
rJMFF002J15+ GAGCTATAAGGAGAAGTGTAAAGGTTTCTTAATCAGTTTGGAATATATCTCCTTCACTAT
                      ____________________________________________________________
consensus GAGCTATAAGGAGAAGTGTAAAGGTTTCTTAATCAGTTTGGAATATATCTCCTTCACTAT
 
. : . : . : . : . : . :
rJMSF012B08+ GCAATCAATTCCAATCTNTTAGAACAAATTCGTGGAGTCTATGCATATNTGAGCTTGTTC
rJMFF002J15+ GCAATCAATTCCAATCTGTTAGAACAAATTTGTGGAGTCTATGCATATTTGAGCTTGTTC
                      ____________________________________________________________
consensus GCAATCAATTCCAATCTGTTAGAACAAATTTGTGGAGTCTATGCATATTTGAGCTTGTTC
 
. : . : . : . : . : . :
rJMSF012B08+ ATAGAAGCAGCTGCAATNTGGCACTTTTTGCCATANTGTNGTCTGCNTATTATGAAACTC
rJMFF002J15+ ATAGAAGCAGCTGCAATTTGGCACTTTTTGCCATATTGTTGTCTGCTTATTATGAAACTC
                      ____________________________________________________________
consensus ATAGAAGCAGCTGCAATTTGGCACTTTTTGCCATATTGTTGTCTGCTTATTATGAAACTC
 
. : . : . : . : . : . :
rJMSF012B08+ AGATTGTGTTTAGGCCCTTGAGGGAATATTCAA
rJMFF002J15+ AGATTGTGTTTAGGCCCTTGAGGGAATATTCAACCTTTGGTTGCTTACTCAACTACGATT
                      ____________________________________________________________
consensus AGATTGTGTTTAGGCCCTTGAGGGAATATTCAACCTTTGGTTGCTTACTCAACTACGATT
 
. : . : . : . : . : . :
rJMFF002J15+ ATTGTACCATGACCTGTAAATTTACTGATACAAGATTACGATGCTAACATTTATCCCGAA
                      ____________________________________________________________
consensus ATTGTACCATGACCTGTAAATTTACTGATACAAGATTACGATGCTAACATTTATCCCGAA