Contig 012212:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002I16Sequence520012212 (4)ref|XP_010318342.1|9e-33PREDICTED: TITAN-like protein isoform X2 [Solanum lycopersicum]607012212 (4)dbj|BAF46298.1|2e-22hypothetical protein [Ipomoea nil]
JMFF007C21Sequence580012212 (4)ref|XP_009601641.1|5e-77PREDICTED: TITAN-like protein [Nicotiana tomentosiformis]808008173 (2)ref|XP_009601641.1|1e-13PREDICTED: TITAN-like protein [Nicotiana tomentosiformis]
JMFF010P11Sequence589012212 (4)ref|XP_009601641.1|5e-77PREDICTED: TITAN-like protein [Nicotiana tomentosiformis]790008173 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF010P11+ GTAACTC
                      ____________________________________________________________
consensus GTAACTC
 
. : . : . : . : . : . :
JMFF007C21+ AATTATATATATAGTCAGAGTTCATTTTATTGTGGATATCATTTGAGGGTCCAATTAA
JMFF010P11+ TGAATTATATATATAGTCAGAGTTCATTTTATTGTGGATATCATTTGAGGGTCCAATTAA
                      ____________________________________________________________
consensus TGAATTATATATATAGTCAGAGTTCATTTTATTGTGGATATCATTTGAGGGTCCAATTAA
 
. : . : . : . : . : . :
JMFF007C21+ AGGCCCATGAGAACCTTCACCAGCAGCCTCGGTCTTTAATGCTTTGCACTGTTTCTCCCA
JMFF010P11+ AGGCCCATGAGAACCTTCACCAGCAGCCTCGGTCTTTAATGCTTTGCACTGTTTCTCCCA
                      ____________________________________________________________
consensus AGGCCCATGAGAACCTTCACCAGCAGCCTCGGTCTTTAATGCTTTGCACTGTTTCTCCCA
 
. : . : . : . : . : . :
JMFF007C21+ CTTGGCGAAATCAGCCTCCGTAATCCGGTAACAATCAATCTTGTCCATTCCACCGCCATA
JMFF010P11+ CTTGGCGAAATCAGCCTCCGTAATCCGGTAACAATCAATCTTGTCCATTCCACCGCCATA
                      ____________________________________________________________
consensus CTTGGCGAAATCAGCCTCCGTAATCCGGTAACAATCAATCTTGTCCATTCCACCGCCATA
 
. : . : . : . : . : . :
JMFF007C21+ TTTCCAAAGGAATCTTTTCACTTTCTTCAAATGATCCTCGCTAGCCAGATGCGCAATCGC
JMFF010P11+ TTTCCAAAGGAATCTTTTCACTTTCTTCAAATGATCCTCGCTAGCCAGATGCGCAATCGC
                      ____________________________________________________________
consensus TTTCCAAAGGAATCTTTTCACTTTCTTCAAATGATCCTCGCTAGCCAGATGCGCAATCGC
 
. : . : . : . : . : . :
JMFF007C21+ ATTCTCACTGTTGAAGAAGCTGTGAAGCTCAGGAATATCAAATTGGCAGAAGCGGCACCA
JMFF010P11+ ATTCTCACTGTTGAAGAAGCTGTGAAGCTCAGGAATATCAAATTGGCAGAAGCGGCACCA
JMFF002I16- CTGTTGAAGAAGCTGTGAAGCTCAGGAATATCAAATTGGCAGAAGCGGCACCA
                      ____________________________________________________________
consensus ATTCTCACTGTTGAAGAAGCTGTGAAGCTCAGGAATATCAAATTGGCAGAAGCGGCACCA
 
. : . : . : . : . : . :
JMFF007C21+ GAGGCGGTTGAGAGAGGCGTGTTCGGGGCGGAGAGGGGTAGGGTTTTTGAGGGAGGAGCG
JMFF010P11+ GAGGCGGTTGAGAGAGGCGTGTTCGGGGCGGAGAGGGGTAGGGTTTTTGAGGGAGGAGCG
JMFF002I16- GAGGCGGTTGAGAGAGGCGTGTTCGGGGCGGAGAGGGGTAGGGTTTTTGAGGGAGGAGCG
                      ____________________________________________________________
consensus GAGGCGGTTGAGAGAGGCGTGTTCGGGGCGGAGAGGGGTAGGGTTTTTGAGGGAGGAGCG
 
. : . : . : . : . : . :
JMFF007C21+ GAGGTCGGCAAGCTTCGATCGAAAGCGAGAGAGCGCTGCCTCCAGCGACTTCTTGTGGTT
JMFF010P11+ GAGGTCGGCAAGCTTCGATCGAAAGCGAGAGAGCGCTGCCTCCAGCGACTTCTTGTGGTT
JMFF002I16- GAGGTCGGCAAGCTTCGATCGAAAGCGAGAGAGCGCTGCCTCCAGCGACTTCTTGTGGTT
                      ____________________________________________________________
consensus GAGGTCGGCAAGCTTCGATCGAAAGCGAGAGAGCGCTGCCTCCAGCGACTTCTTGTGGTT
 
. : . : . : . : . : . :
JMFF007C21+ GGGGAAGAAGTTGTGCCGCCGGCCTTGGTTGTGGTTCAGCTTGCAGACCTCGCAGAACTC
JMFF010P11+ GGGGAAGAAGTTGTGCCGCCGGCCTTGGTTGTGGTTCAGCTTGCAGACCTCGCAGAACTC
JMFF002I16- GGGGAAGAAGTTGTGCCGCCGGCCTTGGTTGTGGTTCAGCTTGCAGACCTCGCAGAACTC
                      ____________________________________________________________
consensus GGGGAAGAAGTTGTGCCGCCGGCCTTGGTTGTGGTTCAGCTTGCAGACCTCGCAGAACTC
 
. : . : . : . : . : . :
JMFF007C21+ AAAACCTTCATTGCTCTTCTTCTTCTTCTTCATCCGTTTCAGAACGGTTATGGAGATTTG
JMFF010P11+ AAAACCTTCATTGCTCTTCTTCTTCTTCTTCATCCGTTTCAGAACGGTTATGGAGATTTG
JMFF002I16- AAAACCTTCATTGCTCTTCTTCTTCTTCTTCATCCGTTTCAGAACGGTTATGGAGATTTG
                      ____________________________________________________________
consensus AAAACCTTCATTGCTCTTCTTCTTCTTCTTCATCCGTTTCAGAACGGTTATGGAGATTTG
 
. : . : . : . : . : . :
JMFF007C21+ CAGAGG
JMFF010P11+ CAGAGG
JMFF002I16- CAGAGGGAATGTAAGCAGGTCGTCCCTCTTCGCAATCGCAGCTTGGTGGATTTGGATTTG
rJMFF002I16+ GGATTTG
                      ____________________________________________________________
consensus CAGAGGGAATGTAAGCAGGTCGTCCCTCTTCGCAATCGCAGCTTGGTGGATTTGGATTTG
 
. : . : . : . : . : . :
JMFF002I16- GAGAAACAACAGCATTTTCAGAGGTGAGGTGATCGATACCAACAGGAAACTGGCGTGGAT
rJMFF002I16+ GAGAAACAACAGCATTTTCAGAGGTGAGGTGATCGATACCAACAGGAAACTGGCGTGGAT
                      ____________________________________________________________
consensus GAGAAACAACAGCATTTTCAGAGGTGAGGTGATCGATACCAACAGGAAACTGGCGTGGAT
 
. : . : . : . : . : . :
JMFF002I16- CAGGGAANTTGTAACAGAATGTCACAGAGCTTTAAAGAG
rJMFF002I16+ CAGGGAAGTTGTAACAGAATGTCACAGAGCTTTAAAGAGGGACATCATGAGGACCACTGG
                      ____________________________________________________________
consensus CAGGGAAGTTGTAACAGAATGTCACAGAGCTTTAAAGAGGGACATCATGAGGACCACTGG
 
. : . : . : . : . : . :
rJMFF002I16+ CNCTGCCACACTTAGAGAGCGGAATACCAGCTGGAAAGCATCGGAGAGTCATGGATGGAC
                      ____________________________________________________________
consensus CNCTGCCACACTTAGAGAGCGGAATACCAGCTGGAAAGCATCGGAGAGTCATGGATGGAC
 
. : . : . : . : . : . :
rJMFF002I16+ TCTGAACGTGGATGCTAGCGTGAAACCAACCACTCTCCAGGCTTCTGTGGAGGAGTTCTC
                      ____________________________________________________________
consensus TCTGAACGTGGATGCTAGCGTGAAACCAACCACTCTCCAGGCTTCTGTGGAGGAGTTCTC
 
. : . : . : . : . : . :
rJMFF002I16+ AAAAGAGCAAATGGTAAATGGGTTCGAGGCTTCTGTGGCAAGTCCAACCATGAAGACGCA
                      ____________________________________________________________
consensus AAAAGAGCAAATGGTAAATGGGTTCGAGGCTTCTGTGGCAAGTCCAACCATGAAGACGCA
 
. : . : . : . : . : . :
rJMFF002I16+ ACTGTTGTTAAGGCGGAGGCCATCTCAAAGGGTCTTGCTTGGGCTTGGAACCATGGTATT
                      ____________________________________________________________
consensus ACTGTTGTTAAGGCGGAGGCCATCTCAAAGGGTCTTGCTTGGGCTTGGAACCATGGTATT
 
. : . : . : . : . : . :
rJMFF002I16+ CGAGACGTTGAGATTCAATCTGATGCCAAGGGAGTTGTTCAATGGATCACTGGGACCGAT
                      ____________________________________________________________
consensus CGAGACGTTGAGATTCAATCTGATGCCAAGGGAGTTGTTCAATGGATCACTGGGACCGAT
 
. : . : . : . : . : . :
rJMFF002I16+ GAACTGAGGGGACCGCTTTGTGTTTATATGGAGGAGATTCGCGACTGGCTCACAAAGGAT
                      ____________________________________________________________
consensus GAACTGAGGGGACCGCTTTGTGTTTATATGGAGGAGATTCGCGACTGGCTCACAAAGGAT
 
. : . : . : . : . : . :
rJMFF002I16+ TGGAGGGTCTCAATCCTTAGTATCTATCGAGAATAGAACGCGAGTGCTGATGCCGCTGCG
                      ____________________________________________________________
consensus TGGAGGGTCTCAATCCTTAGTATCTATCGAGAATAGAACGCGAGTGCTGATGCCGCTGCG
 
. : . : . : . : . : . :
rJMFF002I16+ CTCTTGGGAGCGACGATGGACATGAATTGGAGGGAACTGGANAAATGTCCTATTGGTATG
                      ____________________________________________________________
consensus CTCTTGGGAGCGACGATGGACATGAATTGGAGGGAACTGGANAAATGTCCTATTGGTATG