Contig 012212:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF010P11+                                                                GTAACTC
                      ____________________________________________________________
consensus                                                                  GTAACTC
 
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JMFF007C21+             AATTATATATATAGTCAGAGTTCATTTTATTGTGGATATCATTTGAGGGTCCAATTAA
JMFF010P11+           TGAATTATATATATAGTCAGAGTTCATTTTATTGTGGATATCATTTGAGGGTCCAATTAA
                      ____________________________________________________________
consensus             TGAATTATATATATAGTCAGAGTTCATTTTATTGTGGATATCATTTGAGGGTCCAATTAA
 
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JMFF007C21+           AGGCCCATGAGAACCTTCACCAGCAGCCTCGGTCTTTAATGCTTTGCACTGTTTCTCCCA
JMFF010P11+           AGGCCCATGAGAACCTTCACCAGCAGCCTCGGTCTTTAATGCTTTGCACTGTTTCTCCCA
                      ____________________________________________________________
consensus             AGGCCCATGAGAACCTTCACCAGCAGCCTCGGTCTTTAATGCTTTGCACTGTTTCTCCCA
 
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JMFF007C21+           CTTGGCGAAATCAGCCTCCGTAATCCGGTAACAATCAATCTTGTCCATTCCACCGCCATA
JMFF010P11+           CTTGGCGAAATCAGCCTCCGTAATCCGGTAACAATCAATCTTGTCCATTCCACCGCCATA
                      ____________________________________________________________
consensus             CTTGGCGAAATCAGCCTCCGTAATCCGGTAACAATCAATCTTGTCCATTCCACCGCCATA
 
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JMFF007C21+           TTTCCAAAGGAATCTTTTCACTTTCTTCAAATGATCCTCGCTAGCCAGATGCGCAATCGC
JMFF010P11+           TTTCCAAAGGAATCTTTTCACTTTCTTCAAATGATCCTCGCTAGCCAGATGCGCAATCGC
                      ____________________________________________________________
consensus             TTTCCAAAGGAATCTTTTCACTTTCTTCAAATGATCCTCGCTAGCCAGATGCGCAATCGC
 
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JMFF007C21+           ATTCTCACTGTTGAAGAAGCTGTGAAGCTCAGGAATATCAAATTGGCAGAAGCGGCACCA
JMFF010P11+           ATTCTCACTGTTGAAGAAGCTGTGAAGCTCAGGAATATCAAATTGGCAGAAGCGGCACCA
JMFF002I16-                  CTGTTGAAGAAGCTGTGAAGCTCAGGAATATCAAATTGGCAGAAGCGGCACCA
                      ____________________________________________________________
consensus             ATTCTCACTGTTGAAGAAGCTGTGAAGCTCAGGAATATCAAATTGGCAGAAGCGGCACCA
 
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JMFF007C21+           GAGGCGGTTGAGAGAGGCGTGTTCGGGGCGGAGAGGGGTAGGGTTTTTGAGGGAGGAGCG
JMFF010P11+           GAGGCGGTTGAGAGAGGCGTGTTCGGGGCGGAGAGGGGTAGGGTTTTTGAGGGAGGAGCG
JMFF002I16-           GAGGCGGTTGAGAGAGGCGTGTTCGGGGCGGAGAGGGGTAGGGTTTTTGAGGGAGGAGCG
                      ____________________________________________________________
consensus             GAGGCGGTTGAGAGAGGCGTGTTCGGGGCGGAGAGGGGTAGGGTTTTTGAGGGAGGAGCG
 
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JMFF007C21+           GAGGTCGGCAAGCTTCGATCGAAAGCGAGAGAGCGCTGCCTCCAGCGACTTCTTGTGGTT
JMFF010P11+           GAGGTCGGCAAGCTTCGATCGAAAGCGAGAGAGCGCTGCCTCCAGCGACTTCTTGTGGTT
JMFF002I16-           GAGGTCGGCAAGCTTCGATCGAAAGCGAGAGAGCGCTGCCTCCAGCGACTTCTTGTGGTT
                      ____________________________________________________________
consensus             GAGGTCGGCAAGCTTCGATCGAAAGCGAGAGAGCGCTGCCTCCAGCGACTTCTTGTGGTT
 
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JMFF007C21+           GGGGAAGAAGTTGTGCCGCCGGCCTTGGTTGTGGTTCAGCTTGCAGACCTCGCAGAACTC
JMFF010P11+           GGGGAAGAAGTTGTGCCGCCGGCCTTGGTTGTGGTTCAGCTTGCAGACCTCGCAGAACTC
JMFF002I16-           GGGGAAGAAGTTGTGCCGCCGGCCTTGGTTGTGGTTCAGCTTGCAGACCTCGCAGAACTC
                      ____________________________________________________________
consensus             GGGGAAGAAGTTGTGCCGCCGGCCTTGGTTGTGGTTCAGCTTGCAGACCTCGCAGAACTC
 
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JMFF007C21+           AAAACCTTCATTGCTCTTCTTCTTCTTCTTCATCCGTTTCAGAACGGTTATGGAGATTTG
JMFF010P11+           AAAACCTTCATTGCTCTTCTTCTTCTTCTTCATCCGTTTCAGAACGGTTATGGAGATTTG
JMFF002I16-           AAAACCTTCATTGCTCTTCTTCTTCTTCTTCATCCGTTTCAGAACGGTTATGGAGATTTG
                      ____________________________________________________________
consensus             AAAACCTTCATTGCTCTTCTTCTTCTTCTTCATCCGTTTCAGAACGGTTATGGAGATTTG
 
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JMFF007C21+           CAGAGG                                                      
JMFF010P11+           CAGAGG                                                      
JMFF002I16-           CAGAGGGAATGTAAGCAGGTCGTCCCTCTTCGCAATCGCAGCTTGGTGGATTTGGATTTG
rJMFF002I16+                                                               GGATTTG
                      ____________________________________________________________
consensus             CAGAGGGAATGTAAGCAGGTCGTCCCTCTTCGCAATCGCAGCTTGGTGGATTTGGATTTG
 
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JMFF002I16-           GAGAAACAACAGCATTTTCAGAGGTGAGGTGATCGATACCAACAGGAAACTGGCGTGGAT
rJMFF002I16+          GAGAAACAACAGCATTTTCAGAGGTGAGGTGATCGATACCAACAGGAAACTGGCGTGGAT
                      ____________________________________________________________
consensus             GAGAAACAACAGCATTTTCAGAGGTGAGGTGATCGATACCAACAGGAAACTGGCGTGGAT
 
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JMFF002I16-           CAGGGAANTTGTAACAGAATGTCACAGAGCTTTAAAGAG                     
rJMFF002I16+          CAGGGAAGTTGTAACAGAATGTCACAGAGCTTTAAAGAGGGACATCATGAGGACCACTGG
                      ____________________________________________________________
consensus             CAGGGAAGTTGTAACAGAATGTCACAGAGCTTTAAAGAGGGACATCATGAGGACCACTGG
 
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rJMFF002I16+          CNCTGCCACACTTAGAGAGCGGAATACCAGCTGGAAAGCATCGGAGAGTCATGGATGGAC
                      ____________________________________________________________
consensus             CNCTGCCACACTTAGAGAGCGGAATACCAGCTGGAAAGCATCGGAGAGTCATGGATGGAC
 
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rJMFF002I16+          TCTGAACGTGGATGCTAGCGTGAAACCAACCACTCTCCAGGCTTCTGTGGAGGAGTTCTC
                      ____________________________________________________________
consensus             TCTGAACGTGGATGCTAGCGTGAAACCAACCACTCTCCAGGCTTCTGTGGAGGAGTTCTC
 
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rJMFF002I16+          AAAAGAGCAAATGGTAAATGGGTTCGAGGCTTCTGTGGCAAGTCCAACCATGAAGACGCA
                      ____________________________________________________________
consensus             AAAAGAGCAAATGGTAAATGGGTTCGAGGCTTCTGTGGCAAGTCCAACCATGAAGACGCA
 
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rJMFF002I16+          ACTGTTGTTAAGGCGGAGGCCATCTCAAAGGGTCTTGCTTGGGCTTGGAACCATGGTATT
                      ____________________________________________________________
consensus             ACTGTTGTTAAGGCGGAGGCCATCTCAAAGGGTCTTGCTTGGGCTTGGAACCATGGTATT
 
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rJMFF002I16+          CGAGACGTTGAGATTCAATCTGATGCCAAGGGAGTTGTTCAATGGATCACTGGGACCGAT
                      ____________________________________________________________
consensus             CGAGACGTTGAGATTCAATCTGATGCCAAGGGAGTTGTTCAATGGATCACTGGGACCGAT
 
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rJMFF002I16+          GAACTGAGGGGACCGCTTTGTGTTTATATGGAGGAGATTCGCGACTGGCTCACAAAGGAT
                      ____________________________________________________________
consensus             GAACTGAGGGGACCGCTTTGTGTTTATATGGAGGAGATTCGCGACTGGCTCACAAAGGAT
 
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rJMFF002I16+          TGGAGGGTCTCAATCCTTAGTATCTATCGAGAATAGAACGCGAGTGCTGATGCCGCTGCG
                      ____________________________________________________________
consensus             TGGAGGGTCTCAATCCTTAGTATCTATCGAGAATAGAACGCGAGTGCTGATGCCGCTGCG
 
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rJMFF002I16+          CTCTTGGGAGCGACGATGGACATGAATTGGAGGGAACTGGANAAATGTCCTATTGGTATG
                      ____________________________________________________________
consensus             CTCTTGGGAGCGACGATGGACATGAATTGGAGGGAACTGGANAAATGTCCTATTGGTATG