Contig 012210:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF026M24+                 CTGGCTTGGGCGAAGAATCCTGCATTTGGTCATCAATAAGGGTTTGCAAAAGA
                      ____________________________________________________________
consensus                    CTGGCTTGGGCGAAGAATCCTGCATTTGGTCATCAATAAGGGTTTGCAAAAGA
 
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rJMFF026M24+          GAGTATACACATTAATCCTTTCCGTTTCAGGTTTTTTACCATTAAGGGTTGTATTGCTTG
                      ____________________________________________________________
consensus             GAGTATACACATTAATCCTTTCCGTTTCAGGTTTTTTACCATTAAGGGTTGTATTGCTTG
 
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rJMFF026M24+          GTTTATCTGTTCTGTGTACACCAGGAGGATTAGTCTATGAAATTCTTGCTTTCTTGGGGT
                      ____________________________________________________________
consensus             GTTTATCTGTTCTGTGTACACCAGGAGGATTAGTCTATGAAATTCTTGCTTTCTTGGGGT
 
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rJMFF026M24+          TTCTTTCCCTTTTATGTTGTGCGGGGGTTGGCATATGCACACTTGTGTACTTTCCTGTTG
rJMFF002B24+                      TATGTTGTGCGGGGGTTGGCATATGCACACTTGTGTACTTTCCTGTTG
                      ____________________________________________________________
consensus             TTCTTTCCCTTTTATGTTGTGCGGGGGTTGGCATATGCACACTTGTGTACTTTCCTGTTG
 
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rJMFF026M24+          CCGATTCTTTAGCTTTGAGGAAACTACAGAGAGATATAGAGGCTAGGCAAAGGGTGAGTG
rJMFF002B24+          CCGATTCTTTAGCTTTGAGGAAACTACAGAGAGATATAGAGGCTAGGCAAAGGGTGAGTG
                      ____________________________________________________________
consensus             CCGATTCTTTAGCTTTGAGGAAACTACAGAGAGATATAGAGGCTAGGCAAAGGGTGAGTG
 
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rJMFF026M24+          ATGATCAACATAACGACACCATTTCTCTAATTGCTAACCAAAGCCTTCCTGGAGGAAGTA
rJMFF002B24+          ATGATCAACATAACGACACCATTTCTCTAATTGCTAACCAAAGCCTTCCTGGAGGAAGTA
                      ____________________________________________________________
consensus             ATGATCAACATAACGACACCATTTCTCTAATTGCTAACCAAAGCCTTCCTGGAGGAAGTA
 
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rJMFF026M24+          TTGCAACTAGTCCCGGCAGAAACTCAGCAGCTTCAACAAAGCGAGGATCAATTTCTTTTC
rJMFF002B24+          TTGCAACTAGTCCCGGCAGAAACTCAGCAGCTTCAACAAAGCGAGGATCAATTTCTTTTC
                      ____________________________________________________________
consensus             TTGCAACTAGTCCCGGCAGAAACTCAGCAGCTTCAACAAAGCGAGGATCAATTTCTTTTC
 
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rJMFF026M24+          GGACAATGGATAAAGATGACACTTCCGGGGCCTTTGTGGAGCTCAGCCTCTTCTCTCCAA
rJMFF002B24+          GGACAATGGATAAAGATGACACTTCCGGGGCCTTTGTGGAGCTCAGCCTCTTCTCTCCAA
                      ____________________________________________________________
consensus             GGACAATGGATAAAGATGACACTTCCGGGGCCTTTGTGGAGCTCAGCCTCTTCTCTCCAA
 
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rJMFF026M24+          GTCAGCATTCGAGCCCTCCCGACTCACCTCAACTTCTTGGCTGGCCAATGCTCCCACCTG
rJMFF047G18+                     AGCCCTCCCGACTCACCTCAACTTCTTGGCTGGCCAATGCTCCCACCTG
rJMFF002B24+          GTCAGCATTCGAGCCCTCCCGACTCACCTCAACTTCTTGGCTGGCCAATGCTCCCACCTG
                      ____________________________________________________________
consensus             GTCAGCATTCGAGCCCTCCCGACTCACCTCAACTTCTTGGCTGGCCAATGCTCCCACCTG
 
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rJMFF026M24+          CAAAAAGAGTTCCTGTTTCCTGATAGCTGCAGAGTTAAAAAGAAGAGTCTTGGTGAACCC
rJMFF047G18+          CAAAAAGAGTTCCTGTTTCCTGATAGCTGCAGAGTTAAAAAGAAGAGTCTTGGTGAACCC
rJMFF002B24+          CAAAAAGAGTTCCTGTTTCCTGATAGCTGCAGAGTTAAAAAGAAGAGTCTTGGTGAACCC
                      ____________________________________________________________
consensus             CAAAAAGAGTTCCTGTTTCCTGATAGCTGCAGAGTTAAAAAGAAGAGTCTTGGTGAACCC
 
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rJMFF026M24+          CATTTTTGTGGTGAAGAAACTCTGTAAAGATTTTTAGCTTTTATAATAAGTACTGCTCTT
rJMFF047G18+          CATTTTTGTGGTGAAGAAACTCTGTAAAGATTTTTAGCTTTTATAATAAGTACTGCTCTT
rJMFF002B24+          CATTTTTGTGGTGAAGAAACTCTGTAAAGATTTTTAGCTTTTATAATAAGTACTGCTCTT
                      ____________________________________________________________
consensus             CATTTTTGTGGTGAAGAAACTCTGTAAAGATTTTTAGCTTTTATAATAAGTACTGCTCTT
 
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rJMFF026M24+          TTTTAGTTTTCACTTTTTAAAAATGTTATGATGATTTGACTGCTGTCCACCTTATTTTTT
rJMFF047G18+          TTTTAGTTTTCACTTTTTAAAAATGTTATGATGATTTGACTGCTGTCCACCTTATTTTTT
rJMFF002B24+          TTTTAGTTTTCACTTTTTAAAAATGTTATGATGATTTGACTGCTGTCCACCTTATTTTTT
                      ____________________________________________________________
consensus             TTTTAGTTTTCACTTTTTAAAAATGTTATGATGATTTGACTGCTGTCCACCTTATTTTTT
 
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rJMFF026M24+          TGGTGGAATTCTTGATCTATGAGCTGCTGTATCTTTTA                      
rJMFF047G18+          TGGTGGAATTCTTGATCTATGAGCTGCTGTATCTTTTATGTTTTCTTCCAGTTCAATACT
rJMFF002B24+          TGGTGGAATTCTTGATCTATGAGCTGCTGTATCTTTTATGTTTTCTTCCAGTTCAATACT
                      ____________________________________________________________
consensus             TGGTGGAATTCTTGATCTATGAGCTGCTGTATCTTTTATGTTTTCTTCCAGTTCAATACT
 
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rJMFF047G18+          TTTCTACAAATTTATTGATGCTTGAGAGATAAGAAATACACCTTTTCAAGTCCGAG    
rJMFF002B24+          TTTCTACAAATTTATTGATGCTTGAGAGATAAGAAATACACCTTTTCAAGTCCGAGAAAT
                      ____________________________________________________________
consensus             TTTCTACAAATTTATTGATGCTTGAGAGATAAGAAATACACCTTTTCAAGTCCGAGAAAT
 
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rJMFF002B24+          TTATGGCTGGGTGGTAACTTTCATTACTCAGCTTTCAAGTGTCAGACCGTACTTATGGCT
                      ____________________________________________________________
consensus             TTATGGCTGGGTGGTAACTTTCATTACTCAGCTTTCAAGTGTCAGACCGTACTTATGGCT