Contig 012205:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022M08Sequence466012205 (3)gb|KCW83274.1|6e-67hypothetical protein EUGRSUZ_B00211 [Eucalyptus grandis]737009955 (4)ref|XP_010319028.1|5e-98PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Solanum lycopersicu
JMFF034J08Sequence569012205 (3)ref|XP_002511301.1|5e-92afc, putative [Ricinus communis] gb|EEF51903.1| afc, putative [Ricinus communis]705009955 (4)ref|XP_006439952.1|4e-93hypothetical protein CICLE_v10020223mg [Citrus clementina] gb|ESR53192.1| hypoth
JMSF053E01Sequence676012205 (3)ref|XP_002511301.1|5e-50afc, putative [Ricinus communis] gb|EEF51903.1| afc, putative [Ricinus communis]923019467ref|XP_004236278.1|1e-95PREDICTED: serine/threonine-protein kinase AFC2 isoform X1 [Solanum lycopersicu

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF053E01+ AGGTCAATAGGAAATG
                      ____________________________________________________________
consensus AGGTCAATAGGAAATG
 
. : . : . : . : . : . :
JMSF053E01+ AGCGGTAATTGTTTTTCCGTAGAAAATCGTATAAGCTTGGTCCAAGCTTCTCAAAGACCT
                      ____________________________________________________________
consensus AGCGGTAATTGTTTTTCCGTAGAAAATCGTATAAGCTTGGTCCAAGCTTCTCAAAGACCT
 
. : . : . : . : . : . :
JMSF053E01+ GTTATCATTTAAGTTCATCCACAATTTTAATCCCCATAACATTTGTTAACTGGGGAAATT
                      ____________________________________________________________
consensus GTTATCATTTAAGTTCATCCACAATTTTAATCCCCATAACATTTGTTAACTGGGGAAATT
 
. : . : . : . : . : . :
JMSF053E01+ AATCCAATCCACTAACCAACCATATAATACTTACAATACAAACATGGTTACGATAGTCAA
                      ____________________________________________________________
consensus AATCCAATCCACTAACCAACCATATAATACTTACAATACAAACATGGTTACGATAGTCAA
 
. : . : . : . : . : . :
JMSF053E01+ ACCAGTTCCGTATTTGAACACAACTGCAAGGAACAAACAAATTCAACCACTGCCAATTTA
                      ____________________________________________________________
consensus ACCAGTTCCGTATTTGAACACAACTGCAAGGAACAAACAAATTCAACCACTGCCAATTTA
 
. : . : . : . : . : . :
JMSF053E01+ CAAGAGGCCAAAATGGGACCATAGCAAAAGTAATTAATGTTACAATAGGCACAGGCACTA
                      ____________________________________________________________
consensus CAAGAGGCCAAAATGGGACCATAGCAAAAGTAATTAATGTTACAATAGGCACAGGCACTA
 
. : . : . : . : . : . :
JMFF022M08+ CGATTGCCTCCTTTATCATGTTTACCAAGCTGTTGAAGCACATCAACCTCAA
JMFF034J08+ CGATTGCCTCCTTTATCATGTTTACCAAGCTGTTGAAGCACATCAACCTCAA
JMSF053E01+ TTACTCACCGATTGCCTCCTTTATCATGTTTACCAAGCTGTTGAAGCACATCAACCTCAA
                      ____________________________________________________________
consensus TTACTCACCGATTGCCTCCTTTATCATGTTTACCAAGCTGTTGAAGCACATCAACCTCAA
 
. : . : . : . : . : . :
JMFF022M08+ TCATAGCTGCCTCACGATACTTCTTAATGCCACGAACAATTTTAATGGCAACCATTTCTT
JMFF034J08+ TCATAGCTGCCTCACGATACTTCTTAATGCCACGAACAATTTTAATGGCAACCATTTCTT
JMSF053E01+ TCATAGCTGCCTCACGATACTTCTTAATGCCACGAACAATTTTAATGGCAACCATTTCTT
                      ____________________________________________________________
consensus TCATAGCTGCCTCACGATACTTCTTAATGCCACGAACAATTTTAATGGCAACCATTTCTT
 
. : . : . : . : . : . :
JMFF022M08+ TCCTTTCTCGGTCCCAACATTCTAGAACCTGTCCAAAGGTGCCCTCACCCATTTTGCTGT
JMFF034J08+ TCCTTTCTCGGTCCCAACATTCTAGAACCTGTCCAAAGGTGCCCTCACCCATTTTGCTGT
JMSF053E01+ TCCTTTCTCGGTCCCAACATTCTAGAACCTGTCCAAAGGTGCCCTCACCCATTTTGCTGT
                      ____________________________________________________________
consensus TCCTTTCTCGGTCCCAACATTCTAGAACCTGTCCAAAGGTGCCCTCACCCATTTTGCTGT
 
. : . : . : . : . : . :
JMFF022M08+ GTATCTTATCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGGCCGCTTCCGTGG
JMFF034J08+ GTATCTTATCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGGCCGCTTCCGTGG
JMSF053E01+ GTATCTTATCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGGCCGCTTCCGTGG
                      ____________________________________________________________
consensus GTATCTTATCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGGCCGCTTCCGTGG
 
. : . : . : . : . : . :
JMFF022M08+ TCGCCGGTCGAGTTGCGGGAGGGGAAACTCGGTCACGCGCTCTGTCTCCATCGTTGCAGA
JMFF034J08+ TCGCCGGTCGAGTTGCGGGAGGGGAAACTCGGTCACGCGCTCTGTCTCCATCGTTGCAGA
JMSF053E01+ TCGCCGGTCGAGTTGTGGGAGGGGAAACTCGGTCACGCGCTCTGTCTCCATCGTTGCAGA
                      ____________________________________________________________
consensus TCGCCGGTCGAGTTGCGGGAGGGGAAACTCGGTCACGCGCTCTGTCTCCATCGTTGCAGA
 
. : . : . : . : . : . :
JMFF022M08+ GAAATTTAGAAAGAGAGAGAAAGTTGAAGGAGATGA
JMFF034J08+ GAAATTTAGAAAGAGAGAGAAAGTTGAAGGAGATGA
JMSF053E01+ GAAATTTAGAAAGAGAGAGAAAGTTGAAGGAGATGATGATAGAGAGAATAAGGATGCGTC
                      ____________________________________________________________
consensus GAAATTTAGAAAGAGAGAGAAAGTTGAAGGAGATGATGATAGAGAGAATAAGGATGCGTC