Contig 012203:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS126E01+                                                               GATCCTTC
JMSF052J14+                                        TTTGCTAGGTGTGATGTTAGCAGGATCCTTC
                      ____________________________________________________________
consensus                                          TTTGCTAGGTGTGATGTTAGCAGGATCCTTC
 
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JMFS126E01+           CCCGGAGTAGGTAAGACAAAATCATCATCATCATCATCGCCCACAGCCTTGTGGGCTTTC
JMSF052J14+           CCCGGAGTAGGTAAGACAAAATCATCATCATCATCATCGCCCACAGCCTTGTGGGCTTTC
                      ____________________________________________________________
consensus             CCCGGAGTAGGTAAGACAAAATCATCATCATCATCATCGCCCACAGCCTTGTGGGCTTTC
 
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JMFS126E01+           TTACCAGGGGGGGGCTTACCATGGCCAGATAATTCTTCACTGTCTCTTTGAGCCTTTCTC
JMSF052J14+           TTACCAGGGGGGGGCTTACCATGGCCAGATAATTCTTCACTGTCTCTTTGAGCCTTTCTC
                      ____________________________________________________________
consensus             TTACCAGGGGGGGGCTTACCATGGCCAGATAATTCTTCACTGTCTCTTTGAGCCTTTCTC
 
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JMFS126E01+           TTGGAAGATAATTCCTCTACCTCCTTTTCTTCCTTTGCCTTACCTGTAGCAAAATACTTG
JMSF052J14+           TTGGAAGATAATTCCTCTACCTCCTTTTCTTCCTTTGCCTTACCTGTAGCAAAATACTTG
                      ____________________________________________________________
consensus             TTGGAAGATAATTCCTCTACCTCCTTTTCTTCCTTTGCCTTACCTGTAGCAAAATACTTG
 
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JMSF012M14+                                                           TTTGAAGAAGGT
JMFS126E01+           CTAGTTTTCCTTCTACCTGAACTTTCTTGTCCATCCAATTTCTCTGGTTTTGAAGAAGGT
JMSF052J14+           CTAGTTTTCCTTCTACCTGAACTTTCTTGTCCATCCAATTTCTCTGGTTTTGAAGAAGGT
                      ____________________________________________________________
consensus             CTAGTTTTCCTTCTACCTGAACTTTCTTGTCCATCCAATTTCTCTGGTTTTGAAGAAGGT
 
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JMSF012M14+           TTATCCGATGCACTGGGCTTCGCAGAGTTTGAAGCATTACCATTGCCAGTACTTGTGTCA
JMFS126E01+           TTATCCGATGCACTGGGCTTCGCAGAGTTTGAAGCATTACCATTGCCAGTACTTGTGTCA
JMSF052J14+           TTATCCGATGCACTGGGCTTCGCAGAGTTTGAAGCATTACCATTGCCAGTACTTGTGTCA
                      ____________________________________________________________
consensus             TTATCCGATGCACTGGGCTTCGCAGAGTTTGAAGCATTACCATTGCCAGTACTTGTGTCA
 
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JMSF012M14+           TGTTTCTTCATGAACCACTTTCTGATATCCGACATATCTGAAAGGAGTCACCGGGTTCAA
JMFS126E01+           TGTTTCTTCATGAACCACTTTCTGATATCCGACATATCTGAAAGGAGTCACCGGGTTCAA
JMSF052J14+           TGTTTCTTCATGAACCACTTTCTGATATCCGACATATCTGAAAGGAGTCACCGGGTTCAA
                      ____________________________________________________________
consensus             TGTTTCTTCATGAACCACTTTCTGATATCCGACATATCTGAAAGGAGTCACCGGGTTCAA
 
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JMSF012M14+           TTGTCGATCTTTGTACAAAATGTTACTCGTCCAAGTAGTATACTAGTGCGATTCTACTAC
JMFS126E01+           TTGTCGATCTTTGTACAAAATGTTACTCGTCCAAGTAGTATACTAGTGCGATTCTACTAC
JMSF052J14+           TTGTCGATCTTTGTACAAAATGTTACTCGTCCAAGTAGTATACTAGTGCGATTCTACTAC
                      ____________________________________________________________
consensus             TTGTCGATCTTTGTACAAAATGTTACTCGTCCAAGTAGTATACTAGTGCGATTCTACTAC
 
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JMSF012M14+           TGTGTAGCTATGAATTTTACCGCGGACGTTTCTC                          
JMFS126E01+           TGTGTAGCTATGAATTTTACCGCGGACGTTTCTCTGTGTCGCAGCTGAAGCGGAGAAAGG
JMSF052J14+           TGTGTAGCTATGAATTTTACCGCGGACGTTTCTCTGTGTCGCAGCTGAAGCGGAGAAAGG
                      ____________________________________________________________
consensus             TGTGTAGCTATGAATTTTACCGCGGACGTTTCTCTGTGTCGCAGCTGAAGCGGAGAAAGG
 
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JMFS126E01+           GTTTTAATATCGGTTATTGGTTTAATGCGAAAGCGTATTCAAGCTACTAGGGGAAGAAGC
JMSF052J14+           GTTTTAATATCGGTTATTGGTTTAATGCGAAAGCGTATTCAAGCTACTAGGGGAAGAAGC
                      ____________________________________________________________
consensus             GTTTTAATATCGGTTATTGGTTTAATGCGAAAGCGTATTCAAGCTACTAGGGGAAGAAGC
 
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JMFS126E01+           GCCATTTTCCATCAATGGCGAAATCAAG                                
JMSF052J14+           GCCATTTTCCATCAATGGCGAAATCAAGGGCTCAGGTTTTCGAAATGATTATAGCCGTCC
                      ____________________________________________________________
consensus             GCCATTTTCCATCAATGGCGAAATCAAGGGCTCAGGTTTTCGAAATGATTATAGCCGTCC