| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024C04 | Sequence | 529 | 012193 (4) | emb|CDP10503.1| | 7e-53 | unnamed protein product [Coffea canephora] | 774 | 001225 (4) | gb|EYU34935.1| | 1e-80 | hypothetical protein MIMGU_mgv1a004458mg [Erythranthe guttata] |
| JMFF048D18 | Sequence | 443 | 012193 (4) | emb|CDP10503.1| | 5e-47 | unnamed protein product [Coffea canephora] | 462 | 001225 (4) | gb|EYU34935.1| | 9e-37 | hypothetical protein MIMGU_mgv1a004458mg [Erythranthe guttata] |
| JMSF049M24 | Sequence | 650 | 012193 (4) | emb|CDP10503.1| | 1e-72 | unnamed protein product [Coffea canephora] | 745 | 001225 (4) | gb|EYU34935.1| | 2e-79 | hypothetical protein MIMGU_mgv1a004458mg [Erythranthe guttata] |
| JMSF050M24 | Sequence | 599 | 012193 (4) | emb|CDP10503.1| | 4e-65 | unnamed protein product [Coffea canephora] | 665 | 001225 (4) | gb|EYU34935.1| | 9e-74 | hypothetical protein MIMGU_mgv1a004458mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMSF049M24+ CACCATACTCCACGGAATGAATCACTTTCCCTTCAAAAACNTCCGGCCCT
____________________________________________________________
consensus CACCATACTCCACGGAATGAATCACTTTCCCTTCAAAAACNTCCGGCCCT
. : . : . : . : . : . :
JMSF049M24+ TTCCCCGGAGGGAACTCTGGGATGTTGCCCAGACCGCTGAATTTCCCCGTACAAATAACA
JMSF050M24+ TCCCCGGAGGGAACTCTGGGATGTTGCCCAGACCGCTGAATTTCCCCGTACAAATAACA
____________________________________________________________
consensus TTCCCCGGAGGGAACTCTGGGATGTTGCCCAGACCGCTGAATTTCCCCGTACAAATAACA
. : . : . : . : . : . :
JMSF049M24+ ACAAACTCCGCCACATACTCCTTTATGTTTGTGTGAGTGGAATCAGTGGATGAAGGATGA
JMFF024C04+ CCACATACTCCTTTATGTTTGTGTGAGTGGAATCAGTGGATGAAGGATGA
JMSF050M24+ ACAAACTCCGCCACATACTCCTTTATGTTTGTGTGAGTGGAATCAGTGGATGAAGGATGA
____________________________________________________________
consensus ACAAACTCCGCCACATACTCCTTTATGTTTGTGTGAGTGGAATCAGTGGATGAAGGATGA
. : . : . : . : . : . :
JMSF049M24+ TGAGGATCAGCTACTGTGTGTTCTACTAAAAGGTTCCATTTCCCTTTTGAACCGAATGCT
JMFF024C04+ TGAGGATCAGCTACTGTGTGTTCTACTAAAAGGTTCCATTTCCCTTTTGAACCGAATGCT
JMFF048D18+ CCCTTTTGAACCGAATGCT
JMSF050M24+ TGAGGATCAGCTACTGTGTGTTCTACTAAAAGGTTCCATTTCCCTTTTGAACCGAATGCT
____________________________________________________________
consensus TGAGGATCAGCTACTGTGTGTTCTACTAAAAGGTTCCATTTCCCTTTTGAACCGAATGCT
. : . : . : . : . : . :
JMSF049M24+ AGACCGGTGCCGCCCCACAGCTCCCAAGACTGCATCTCTTCCTCAGAAACTCCGACATAG
JMFF024C04+ AGACCGGTGCCGCCCCACAGCTCCCAAGACTGCATCTCTTCCTCAGAAACTCCGACATAG
JMFF048D18+ AGACCGGTGCCGCCCCACAGCTCCCAAGACTGCATCTCTTCCTCAGAAACTCCGACATAG
JMSF050M24+ AGACCGGTGCCGCCCCACAGCTCCCAAGACTGCATCTCTTCCTCAGAAACTCCGACATAG
____________________________________________________________
consensus AGACCGGTGCCGCCCCACAGCTCCCAAGACTGCATCTCTTCCTCAGAAACTCCGACATAG
. : . : . : . : . : . :
JMSF049M24+ TCCAAGGAAATGACTTTGGACCTCAACTTAATGTACGGCAACAACCCAAAATGTTGAGCA
JMFF024C04+ TCCAAGGAAATGACTTTGGACCTCAACTTAATGTACGGCAACAACCCAAAATGTTGAGCA
JMFF048D18+ TCCAAGGAAATGACTTTGGACCTCAACTTAATGTACGGCAACAACCCAAAATGTTGAGCA
JMSF050M24+ TCCAAGGAAATGACTTTGGACCTCAACTTAATGTACGGCAACAACCCAAAATGTTGAGCA
____________________________________________________________
consensus TCCAAGGAAATGACTTTGGACCTCAACTTAATGTACGGCAACAACCCAAAATGTTGAGCA
. : . : . : . : . : . :
JMSF049M24+ TAGGATTCAATGTAGTTGAGTACCTTTGTGTTGTGAGGATAGGTTTCTTGGACAGAGGAT
JMFF024C04+ TAGGATTCAATGTAGTTGAGTACCTTTGTGTTGTGAGGATAGGTTTCTTGGACAGAGGAT
JMFF048D18+ TAGGATTCAATGTAGTTGAGTACCTTTGTGTTGTGAGGATAGGTTTCTTGGACAGAGGAT
JMSF050M24+ TAGGATTCAATGTAGTTGAGTACCTTTGTGTTGTGAGGATAGGTTTCTTGGACAGAGGAT
____________________________________________________________
consensus TAGGATTCAATGTAGTTGAGTACCTTTGTGTTGTGAGGATAGGTTTCTTGGACAGAGGAT
. : . : . : . : . : . :
JMSF049M24+ GGCCAAGGGAAATCCGGGAATTCATAATACCATCTGGGTGTCTGAAGCTTGGTAGACTCG
JMFF024C04+ GGCCAAGGGAAATCCGGGAATTCATAATACCATCTGGGTGTCTGAAGCTTGGTAGACTCG
JMFF048D18+ GGCCAAGGGAAATCCGGGAATTCATAATACCATCTGGGTGTCTGAAGCTTGGTAGACTCG
JMSF050M24+ GGCCAAGGGAAATCCGGGAATTCATAATACCATCTGGGTGTCTGAAGCTTGGTAGACTCG
____________________________________________________________
consensus GGCCAAGGGAAATCCGGGAATTCATAATACCATCTGGGTGTCTGAAGCTTGGTAGACTCG
. : . : . : . : . : . :
JMSF049M24+ ATTGTTTGAGCCCATAATCCCCCTATCCTTCCTTCACCTTCAAAAACCACTGGATTCAGA
JMFF024C04+ ATTGTTTGAGCCCATAATCCCCCTATCCTTCCTTCACCTTCAAAAACCACTGGATTCAGA
JMFF048D18+ ATTGTTTGAGCCCATAATCCCCCTATCCTTCCTTCACCTTCAAAAACCACTGGATTCAGA
JMSF050M24+ ATTGTTTGAGCCCATAATCCCCCTATCCTTCCTTCACCTTCAAAAACCACTGGATTCAGA
____________________________________________________________
consensus ATTGTTTGAGCCCATAATCCCCCTATCCTTCCTTCACCTTCAAAAACCACTGGATTCAGA
. : . : . : . : . : . :
JMSF049M24+ CCCCTTGCTAATGCGTGTCTGCAGGCCGCCAGCCCGGCTACTCCCGCACCGATGATCGCT
JMFF024C04+ CCCCTTGCTAATGCGTGTCTGCAGGCCGCCAGCCCGGCTACTCCCGCACCGATGATCGCT
JMFF048D18+ CCCCTTGCTAATGCGTGTCTGCAGGCCGCCAGCCCGGCTACTCCCGCACCGATGATCGCT
JMSF050M24+ CCCCTTGCTAATGCGTGTCTGCAGGCCGCCAGCCCGGCTACTCCCGCACCGATGATCGCT
____________________________________________________________
consensus CCCCTTGCTAATGCGTGTCTGCAGGCCGCCAGCCCGGCTACTCCCGCACCGATGATCGCT
. : . : . : . : . : . :
JMSF049M24+ ATTCGTCTCTCCGTATCCATCTCTATTCTCTACTGCACTGATGATGATATGATATGATT
JMFF024C04+ ATTCGTCTCTCCGTATCCATCTCTATTCTCTACTGCACTGATGATGATATGATATGATT
JMFF048D18+ ATTCGTCTCTCCGTATCCATCTCTATTCTCTACTGCACTGATGATGATATGATATGATT
JMSF050M24+ ATTCGTCTCTCCGTATCCATCTCTATTCTCTACTGCACTGATGATGATATGATATGATTC
____________________________________________________________
consensus ATTCGTCTCTCCGTATCCATCTCTATTCTCTACTGCACTGATGATGATATGATATGATTC