Contig 012191:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013L24Sequence338012191 (2)ref|XP_006855518.1|3e-09hypothetical protein AMTR_s00057p00207420 [Amborella trichopoda] gb|ERN16985.1| 703014072 (5)ref|XP_006342787.1|3e-135PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Solanum tuberosum
JMSF049P09Sequence687012191 (2)gb|EYU43934.1|1e-79hypothetical protein MIMGU_mgv1a009865mg [Erythranthe guttata]736014072 (5)ref|XP_004229228.1|3e-111PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Solanum lycopersi

Alignment

This contig is upended


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JMSF049P09+                                            CCAACAGTAGCTGCACAGCCTGCTAAT
                      ____________________________________________________________
consensus                                              CCAACAGTAGCTGCACAGCCTGCTAAT
 
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JMSF049P09+           GCCCCACTGATGTATGAAAGATATGGACTCAAATTAATGTGGTCATCTGATTTTGAAGAT
                      ____________________________________________________________
consensus             GCCCCACTGATGTATGAAAGATATGGACTCAAATTAATGTGGTCATCTGATTTTGAAGAT
 
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JMSF049P09+           CCAGAAGCAAAGGTTTTGAATTTGTGCAACACTGTGAACTGTATGGCAGTATATGGCATG
                      ____________________________________________________________
consensus             CCAGAAGCAAAGGTTTTGAATTTGTGCAACACTGTGAACTGTATGGCAGTATATGGCATG
 
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JMSF049P09+           ACCATAAGTAGGGCTGGAACATTACCACGCCAAAAACCCGGCAAGCCTTCCTCTCTGAAG
                      ____________________________________________________________
consensus             ACCATAAGTAGGGCTGGAACATTACCACGCCAAAAACCCGGCAAGCCTTCCTCTCTGAAG
 
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JMSF049P09+           ATGTCTTTGGCTGCTTGCACCATCCCAGTGTACTTAGATGATTGATATAAATCCTTCNGA
                      ____________________________________________________________
consensus             ATGTCTTTGGCTGCTTGCACCATCCCAGTGTACTTAGATGATTGATATAAATCCTTCNGA
 
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JMSF013L24+                                                                TACATCG
JMSF049P09+           AGCAGGGCCCACTGAACAGTAGGTTCCAATTGAACCTGAAATCTAATCTTAATTACATCG
                      ____________________________________________________________
consensus             AGCAGGGCCCACTGAACAGTAGGTTCCAATTGAACCTGAAATCTAATCTTAATTACATCG
 
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JMSF013L24+           AGCGGCGAGGTCACAGTCCTTGATATACCACCAGAGATTGCCCCGGCCGTGGCATGAATG
JMSF049P09+           AGCGGCGAGGTCACAGTCCNTGATATACCACCAGAGATTGCNCCGGCCGTGGCATGAATG
                      ____________________________________________________________
consensus             AGCGGCGAGGTCACAGTCCTTGATATACCACCAGAGATTGCCCCGGCCGTGGCATGAATG
 
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JMSF013L24+           AATGCCCTTTTCAGCTCCCCTGGCTCTTCCATCTCCCCTATTACACTGCTACTACCTGAG
JMSF049P09+           AATGCCCTTTTCAGCTCCCCTGGCTCTTCCATCTCCCCTATTACACTGCTACTACCTGAG
                      ____________________________________________________________
consensus             AATGCCCTTTTCAGCTCCCCTGGCTCTTCCATCTCCCCTATTACACTGCTACTACCTGAG
 
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JMSF013L24+           AGAGGACAATTGGGAGAGAAAGACGCAAGCCGCCATTAAGAATTCCAGATTTTCAATATA
JMSF049P09+           AGAGGACAATTGGGAGAGAAAGACGCAAGCCGCCATTAAGAATTCCAGATTTTCAATATA
                      ____________________________________________________________
consensus             AGAGGACAATTGGGAGAGAAAGACGCAAGCCGCCATTAAGAATTCCAGATTTTCAATATA
 
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JMSF013L24+           GCATACGGTTTTGCACGCGCGCGCGCGCGCGCGCGTGTGTTTGATGAGCTTGCGTGGCTA
JMSF049P09+           GCATACGGTTTTGCACGCGCGCGCGCGCGCGCGCGTGTGTTTGATGAGCTTGCGTGGCTA
                      ____________________________________________________________
consensus             GCATACGGTTTTGCACGCGCGCGCGCGCGCGCGCGTGTGTTTGATGAGCTTGCGTGGCTA
 
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JMSF013L24+           GGGTTCTCGACGGCGGGGGAGACGGGTTCGCCGCTCAAAGGCGGCGGCCGGAGGTAATAA
JMSF049P09+           GGGTTCTCGACGGCGGGGGAGACGGGTTCGCCGCTCAAAGGCGGCGGCCGGAGGTAATAA
                      ____________________________________________________________
consensus             GGGTTCTCGACGGCGGGGGAGACGGGTTCGCCGCTCAAAGGCGGCGGCCGGAGGTAATAA
 
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JMSF013L24+           TAAGAGGGAGGACTGGAAGAGTTGGACAGT                              
JMSF049P09+           TAAGAGGGAGGACTGGAAGAGTTGGACAGTGGATTGGGAAAGTTGAAAGAGAAAAAGATC
                      ____________________________________________________________
consensus             TAAGAGGGAGGACTGGAAGAGTTGGACAGTGGATTGGGAAAGTTGAAAGAGAAAAAGATC